Strain Fitness in Pantoea sp. MT58 around IAI47_12850

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,709,931	+		IAI47_12840	0.83	+0.0
2,709,955	+		IAI47_12840	0.84	+1.2
2,709,955	+		IAI47_12840	0.84	-1.0
2,709,956	-		IAI47_12840	0.85	-0.7
2,709,967	+		IAI47_12840	0.85	-2.0
2,709,968	-		IAI47_12840	0.85	+0.1
2,709,981	+		IAI47_12840	0.86	-0.6
2,709,981	+		IAI47_12840	0.86	+0.5
2,709,981	+		IAI47_12840	0.86	-0.6
2,709,982	-		IAI47_12840	0.86	-1.2
2,710,058	+		IAI47_12840	0.89	-1.5
2,710,058	+		IAI47_12840	0.89	+0.4
2,710,059	-		IAI47_12840	0.89	+0.1
2,710,059	-		IAI47_12840	0.89	-0.0
2,710,074	+		IAI47_12840	0.90	+0.6
2,710,074	+		IAI47_12840	0.90	-0.3
2,710,074	+		IAI47_12840	0.90	-0.7
2,710,075	-		IAI47_12840	0.90	-1.7
2,710,075	-		IAI47_12840	0.90	-0.0
2,710,118	+				-0.2
2,710,119	-				+0.0
2,710,145	+				+0.1
2,710,145	+				-0.7
2,710,145	+				-1.9
2,710,145	+				-0.7
2,710,146	-				+1.1
2,710,146	-				+0.7
2,710,146	-				+0.4
2,710,148	+				-0.3
2,710,171	+				-0.3
2,710,172	-				-0.1
2,710,203	+				+1.1
2,710,203	+				-1.3
2,710,204	-				+0.2
2,710,223	+				+2.2
2,710,223	+				-0.8
2,710,223	+				-0.0
2,710,224	-				+0.7
2,710,224	-				+1.8
2,710,224	-				-0.6
2,710,224	-				-0.8
2,710,224	-				+0.5
2,710,224	-				+1.5
2,710,224	-				-0.9
2,710,224	-				-0.7
2,710,224	-				+1.7
2,710,224	-				-0.4
2,710,258	-				+0.4
2,710,258	-				+0.8
2,710,304	+				+1.3
2,710,305	-				-1.5
2,710,305	-				-1.7
2,710,305	-				+0.8
2,710,310	+				+1.7
2,710,311	-				-1.0
2,710,311	-				+1.2
2,710,332	-				-0.7
2,710,355	+				-0.6
2,710,355	+				-0.9
2,710,356	-				+0.4
2,710,356	-				+0.2
2,710,425	+				+0.3
2,710,426	-				+0.0
2,710,426	-				+0.6
2,710,434	+				-0.4
2,710,434	+				+1.2
2,710,436	+				-0.5
2,710,453	+				+0.8
2,710,453	+				-0.7
2,710,454	-				+1.2
2,710,454	-				+0.3
2,710,491	-				+0.1
2,710,516	+				-0.9
2,710,517	-				+0.8
2,710,517	-				-1.6
2,710,517	-				+0.3
2,710,517	-				+0.4
2,710,517	-				+0.1
2,710,517	-				+0.1
2,710,808	-				-0.3
2,710,824	-				-0.9
2,710,824	-				+1.8
2,710,824	-				-0.2
2,710,824	-				+0.8
2,710,836	-				+1.1
2,712,640	-				-1.3
2,712,650	-				+1.5
2,712,650	-				-1.0
2,712,660	-				-0.7
2,712,670	-				-0.1
2,713,391	-				-1.2
2,713,405	+				+0.4
2,713,405	+				-0.3
2,713,406	-				-1.7
2,713,406	-				-0.2
2,713,406	-				-0.5
2,713,406	-				-0.7
2,713,406	-				-0.4
2,713,406	-				+0.4
2,713,406	-				-0.9
2,713,414	+				+0.8
2,713,459	+				-0.1
2,713,459	+				+0.2
2,713,463	+				+0.3
2,713,463	+				+0.5
2,713,463	+				-0.2
2,713,464	-				-0.1
2,713,543	+				+0.3
2,713,543	+				-0.3
2,713,543	+				+0.8
2,713,543	+				+0.1
2,713,543	+				-0.0
2,713,543	+				+3.0
2,713,543	+				+0.8
2,713,544	-				-0.6
2,713,544	-				-0.2
2,713,544	-				+0.2
2,713,544	-				+0.4