Strain Fitness in Pantoea sp. MT58 around IAI47_10510

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,227,396	+		IAI47_10500	0.87	+0.8
2,227,431	+		IAI47_10500	0.89	+0.8
2,227,460	+				+0.6
2,227,461	-				+0.1
2,227,461	-				+0.9
2,227,461	-				-1.5
2,227,470	+				+0.8
2,227,592	+				-1.5
2,227,593	-				-0.1
2,227,638	+				-0.2
2,227,658	-				+0.5
2,227,675	+				-1.4
2,227,676	-				+0.1
2,227,676	-				-0.8
2,227,703	+				-0.2
2,227,703	+				+0.4
2,227,704	-				-1.2
2,227,704	-				+0.4
2,227,704	-				-0.2
2,227,704	-				-0.5
2,227,706	+				-0.3
2,227,706	+				-0.2
2,227,707	-				+0.8
2,227,707	-				+1.2
2,227,707	-				+1.2
2,227,707	-				+0.9
2,227,707	-				+0.6
2,227,734	+				-1.8
2,227,734	+				-0.8
2,227,735	-				-0.1
2,227,735	-				+0.1
2,227,735	-				-2.5
2,227,735	-				+0.4
2,227,735	-				+1.2
2,227,735	-				+1.2
2,227,794	-				+0.2
2,227,794	-				+0.9
2,227,887	-		IAI47_10505	0.24	-0.6
2,227,922	+		IAI47_10505	0.30	-0.8
2,227,923	-		IAI47_10505	0.30	-2.0
2,227,951	+		IAI47_10505	0.34	-0.2
2,227,951	+		IAI47_10505	0.34	+1.0
2,227,951	+		IAI47_10505	0.34	+0.0
2,227,952	-		IAI47_10505	0.34	-0.6
2,227,952	-		IAI47_10505	0.34	+0.5
2,227,952	-		IAI47_10505	0.34	+0.6
2,227,956	+		IAI47_10505	0.35	-0.6
2,227,956	+		IAI47_10505	0.35	-0.1
2,227,956	+		IAI47_10505	0.35	-0.5
2,227,956	+		IAI47_10505	0.35	-2.2
2,227,956	+		IAI47_10505	0.35	-0.1
2,227,957	-		IAI47_10505	0.35	-0.4
2,227,957	-		IAI47_10505	0.35	-0.4
2,228,040	+		IAI47_10505	0.49	-0.1
2,228,040	+		IAI47_10505	0.49	+0.1
2,228,040	+		IAI47_10505	0.49	-0.1
2,228,146	-		IAI47_10505	0.67	+0.5
2,228,161	+		IAI47_10505	0.69	+0.1
2,228,161	+		IAI47_10505	0.69	-0.0
2,228,161	+		IAI47_10505	0.69	-0.6
2,228,162	-		IAI47_10505	0.69	+0.8
2,228,162	-		IAI47_10505	0.69	-0.0
2,228,162	-		IAI47_10505	0.69	+3.4
2,228,211	+		IAI47_10505	0.77	+0.1
2,228,211	+		IAI47_10505	0.77	+0.0
2,228,212	-		IAI47_10505	0.77	+2.1
2,228,212	-		IAI47_10505	0.77	-1.6
2,228,212	-		IAI47_10505	0.77	+0.8
2,228,212	-		IAI47_10505	0.77	-0.9
2,228,212	-		IAI47_10505	0.77	-0.2
2,228,268	-		IAI47_10505	0.87	+0.2
2,228,342	-				+1.8
2,228,455	-				-0.3
2,228,490	+		IAI47_10510	0.13	-0.4
2,228,491	-		IAI47_10510	0.13	-0.7
2,228,548	+		IAI47_10510	0.19	-0.7
2,228,549	-		IAI47_10510	0.20	-0.5
2,228,569	+		IAI47_10510	0.22	+0.4
2,228,570	-		IAI47_10510	0.22	+1.3
2,228,648	+		IAI47_10510	0.31	+0.1
2,228,649	-		IAI47_10510	0.31	+0.2
2,228,649	-		IAI47_10510	0.31	-0.6
2,228,751	-		IAI47_10510	0.43	+0.5
2,228,776	+		IAI47_10510	0.46	-0.2
2,228,776	+		IAI47_10510	0.46	+0.3
2,228,777	-		IAI47_10510	0.46	+0.0
2,228,777	-		IAI47_10510	0.46	-0.6
2,228,786	+		IAI47_10510	0.47	-1.6
2,228,786	+		IAI47_10510	0.47	-0.9
2,228,786	+		IAI47_10510	0.47	+0.1
2,228,786	+		IAI47_10510	0.47	+0.6
2,228,786	+		IAI47_10510	0.47	+1.2
2,228,787	-		IAI47_10510	0.47	-0.4
2,228,787	-		IAI47_10510	0.47	-0.4
2,228,787	-		IAI47_10510	0.47	+0.1
2,228,787	-		IAI47_10510	0.47	-0.2
2,228,787	-		IAI47_10510	0.47	+0.8
2,228,787	-		IAI47_10510	0.47	+1.1
2,228,920	-		IAI47_10510	0.63	-0.5
2,228,920	-		IAI47_10510	0.63	+1.4
2,228,920	-		IAI47_10510	0.63	+1.0
2,228,997	+		IAI47_10510	0.72	+0.2
2,228,998	-		IAI47_10510	0.72	-0.6
2,228,998	-		IAI47_10510	0.72	+0.1
2,229,065	+		IAI47_10510	0.79	-0.5
2,229,105	+		IAI47_10510	0.84	+0.2
2,229,106	-		IAI47_10510	0.84	-2.0
2,229,106	-		IAI47_10510	0.84	+0.3
2,229,112	+		IAI47_10510	0.85	-0.9
2,229,112	+		IAI47_10510	0.85	-1.0
2,229,113	-		IAI47_10510	0.85	-0.2
2,229,113	-		IAI47_10510	0.85	+0.6
2,229,190	+				+0.8
2,229,191	-				+0.8
2,229,191	-				-0.6
2,229,206	+				+0.8
2,229,206	+				-0.5
2,229,206	+				-0.7
2,229,206	+				+1.3
2,229,228	-				+0.1
2,229,242	+				+0.0
2,229,243	-				-0.2
2,229,268	-				-0.1
2,229,298	+				+1.8