Strain Fitness in Pantoea sp. MT58 around IAI47_09815

Experiment: Ying_Nucleobase14 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep B; time point 2
2,074,908	+		IAI47_09810	0.25	+0.1
2,074,908	+		IAI47_09810	0.25	+0.4
2,074,976	+		IAI47_09810	0.30	-0.8
2,074,977	-		IAI47_09810	0.30	-1.8
2,074,997	+		IAI47_09810	0.31	-0.3
2,074,998	-		IAI47_09810	0.31	+0.2
2,074,998	-		IAI47_09810	0.31	-1.8
2,074,998	-		IAI47_09810	0.31	+1.4
2,074,998	-		IAI47_09810	0.31	+0.3
2,075,106	-		IAI47_09810	0.40	+0.8
2,075,127	+		IAI47_09810	0.41	-0.2
2,075,128	-		IAI47_09810	0.41	+0.1
2,075,128	-		IAI47_09810	0.41	-0.7
2,075,162	+		IAI47_09810	0.44	+1.2
2,075,264	+		IAI47_09810	0.51	-1.1
2,075,276	+		IAI47_09810	0.52	+0.7
2,075,344	-		IAI47_09810	0.57	+0.1
2,075,355	+		IAI47_09810	0.58	+0.1
2,075,355	+		IAI47_09810	0.58	+0.5
2,075,356	-		IAI47_09810	0.58	+0.6
2,075,356	-		IAI47_09810	0.58	+0.3
2,075,356	-		IAI47_09810	0.58	+0.4
2,075,356	-		IAI47_09810	0.58	+0.8
2,075,356	-		IAI47_09810	0.58	-0.2
2,075,418	-		IAI47_09810	0.63	-1.4
2,075,418	-		IAI47_09810	0.63	+1.1
2,075,418	-		IAI47_09810	0.63	-0.3
2,075,453	+		IAI47_09810	0.66	+1.3
2,075,453	+		IAI47_09810	0.66	+0.6
2,075,454	-		IAI47_09810	0.66	+0.2
2,075,454	-		IAI47_09810	0.66	+0.8
2,075,501	+		IAI47_09810	0.69	+0.2
2,075,502	-		IAI47_09810	0.69	-1.3
2,075,507	+		IAI47_09810	0.70	+0.8
2,075,507	+		IAI47_09810	0.70	+1.7
2,075,573	+		IAI47_09810	0.75	+0.8
2,075,573	+		IAI47_09810	0.75	-0.3
2,075,573	+		IAI47_09810	0.75	-3.0
2,075,574	-		IAI47_09810	0.75	+0.4
2,075,574	-		IAI47_09810	0.75	-0.0
2,075,574	-		IAI47_09810	0.75	+0.1
2,075,574	-		IAI47_09810	0.75	-0.4
2,075,576	+		IAI47_09810	0.75	+0.8
2,075,577	-		IAI47_09810	0.75	-0.4
2,075,601	+		IAI47_09810	0.77	+1.4
2,075,601	+		IAI47_09810	0.77	-0.7
2,075,602	-		IAI47_09810	0.77	+1.2
2,075,602	-		IAI47_09810	0.77	-0.5
2,075,602	-		IAI47_09810	0.77	+0.6
2,075,602	-		IAI47_09810	0.77	-0.2
2,075,602	-		IAI47_09810	0.77	+0.1
2,075,608	+		IAI47_09810	0.77	+2.8
2,075,609	-		IAI47_09810	0.77	-2.4
2,075,609	-		IAI47_09810	0.77	-1.2
2,075,609	-		IAI47_09810	0.77	-0.6
2,075,609	-		IAI47_09810	0.77	-0.2
2,075,609	-		IAI47_09810	0.77	-0.0
2,075,652	+		IAI47_09810	0.81	-0.2
2,075,778	-				+0.4
2,075,778	-				-0.0
2,075,786	+				-1.4
2,075,795	+				-1.0
2,075,795	+				-1.4
2,075,795	+				-0.1
2,075,795	+				-0.6
2,075,795	+				-0.9
2,075,796	-				-1.4
2,075,796	-				+0.4
2,075,796	-				+1.4
2,075,816	-				+0.4
2,075,816	-				+0.8
2,075,818	+				-0.5
2,075,818	+				+1.4
2,075,818	+				+0.8
2,075,819	-				-0.4
2,075,819	-				+0.5
2,075,819	-				+0.8
2,075,860	+				-0.1
2,075,860	+				+0.3
2,075,860	+				-0.2
2,075,860	+				-1.4
2,075,860	+				+0.4
2,075,860	+				-0.8
2,075,861	-				-0.5
2,075,861	-				+0.5
2,075,922	+				-0.2
2,075,965	+				-0.3
2,075,965	+				-0.4
2,075,965	+				+0.6
2,075,978	+				+0.3
2,075,978	+				-0.8
2,075,978	+				+0.1
2,075,979	-				-0.7
2,075,979	-				+0.0
2,075,979	-				-1.1
2,075,979	-				-0.5
2,075,979	-				-1.3
2,076,008	-				-0.0
2,076,087	-		IAI47_09815	0.13	-0.4
2,076,087	-		IAI47_09815	0.13	+0.6
2,076,100	+		IAI47_09815	0.13	+0.7
2,076,100	+		IAI47_09815	0.13	+0.8
2,076,100	+		IAI47_09815	0.13	-0.1
2,076,100	+		IAI47_09815	0.13	-0.5
2,076,100	+		IAI47_09815	0.13	-0.4
2,076,100	+		IAI47_09815	0.13	+0.4
2,076,100	+		IAI47_09815	0.13	-0.7
2,076,101	-		IAI47_09815	0.14	+0.2
2,076,101	-		IAI47_09815	0.14	-0.6
2,076,101	-		IAI47_09815	0.14	+0.8
2,076,101	-		IAI47_09815	0.14	-0.3
2,076,101	-		IAI47_09815	0.14	+1.9
2,076,101	-		IAI47_09815	0.14	-1.7
2,076,101	-		IAI47_09815	0.14	-1.1
2,076,126	+		IAI47_09815	0.15	-0.9
2,076,126	+		IAI47_09815	0.15	+0.0
2,076,134	-		IAI47_09815	0.16	-0.4
2,076,151	-		IAI47_09815	0.17	-1.0
2,076,151	-		IAI47_09815	0.17	+0.8
2,076,151	-		IAI47_09815	0.17	-1.3
2,076,353	-		IAI47_09815	0.31	+1.0
2,076,465	+		IAI47_09815	0.39	-0.5
2,076,465	+		IAI47_09815	0.39	+0.6
2,076,465	+		IAI47_09815	0.39	+0.1
2,076,466	-		IAI47_09815	0.39	+0.8
2,076,466	-		IAI47_09815	0.39	+0.1
2,076,466	-		IAI47_09815	0.39	-0.4
2,076,525	-		IAI47_09815	0.43	-1.4
2,076,595	+		IAI47_09815	0.48	+0.1
2,076,595	+		IAI47_09815	0.48	-1.5
2,076,595	+		IAI47_09815	0.48	+0.5
2,076,596	-		IAI47_09815	0.48	-0.4
2,076,596	-		IAI47_09815	0.48	+0.6
2,076,596	-		IAI47_09815	0.48	-0.2
2,076,596	-		IAI47_09815	0.48	-0.2
2,076,640	+		IAI47_09815	0.51	+0.8
2,076,640	+		IAI47_09815	0.51	+0.5
2,076,641	-		IAI47_09815	0.51	-0.2
2,076,641	-		IAI47_09815	0.51	+1.1
2,076,668	+		IAI47_09815	0.53	+0.1
2,076,669	-		IAI47_09815	0.53	-0.2
2,076,669	-		IAI47_09815	0.53	+0.9
2,076,669	-		IAI47_09815	0.53	+0.5
2,076,799	+		IAI47_09815	0.62	+0.2
2,076,806	-		IAI47_09815	0.62	+0.2
2,076,806	-		IAI47_09815	0.62	+1.1
2,076,819	+		IAI47_09815	0.63	-0.2
2,077,033	+		IAI47_09815	0.78	-0.4
2,077,033	+		IAI47_09815	0.78	-1.2
2,077,034	-		IAI47_09815	0.78	-3.4
2,077,034	-		IAI47_09815	0.78	+1.1
2,077,034	-		IAI47_09815	0.78	+0.3
2,077,337	+				+1.5
2,077,337	+				+0.5
2,077,337	+				+0.6
2,077,338	-				-0.7
2,077,346	+				+0.9
2,077,347	-				+0.2
2,077,386	+				+1.4
2,077,386	+				+1.6
2,077,387	-				-0.2
2,077,387	-				-1.2
2,077,387	-				-0.4
2,077,387	-				+0.5
2,077,387	-				-0.4
2,077,399	+				-0.7
2,077,399	+				-1.0
2,077,399	+				+0.1
2,077,399	+				+0.4
2,077,411	+				+0.4
2,077,412	-				-1.2
2,077,478	+				-0.2
2,077,499	-				-0.6
2,077,499	-				-0.2
2,077,550	+				+0.1
2,077,550	+				+0.1
2,077,550	+				+0.8
2,077,569	+				-0.0
2,077,569	+				+0.2
2,077,570	-				-0.2
2,077,570	-				+0.2
2,077,594	+		IAI47_09820	0.11	+0.2
2,077,594	+		IAI47_09820	0.11	-0.2
2,077,594	+		IAI47_09820	0.11	-1.5
2,077,594	+		IAI47_09820	0.11	+0.4
2,077,595	-		IAI47_09820	0.11	-1.2
2,077,597	+		IAI47_09820	0.11	+0.1
2,077,598	-		IAI47_09820	0.11	+0.8
2,077,680	+		IAI47_09820	0.14	-1.5
2,077,680	+		IAI47_09820	0.14	-0.5
2,077,681	-		IAI47_09820	0.14	+0.4
2,077,681	-		IAI47_09820	0.14	+0.2
2,077,761	+		IAI47_09820	0.18	-0.2
2,077,761	+		IAI47_09820	0.18	-0.5
2,077,761	+		IAI47_09820	0.18	+0.2
2,077,761	+		IAI47_09820	0.18	+0.8
2,077,762	-		IAI47_09820	0.18	+0.1
2,077,819	+		IAI47_09820	0.20	-0.1
2,077,820	-		IAI47_09820	0.20	-0.4
2,077,902	-		IAI47_09820	0.24	+0.9
2,077,924	-		IAI47_09820	0.25	+0.1
2,077,924	-		IAI47_09820	0.25	+0.4
2,077,924	-		IAI47_09820	0.25	+0.6
2,078,048	+		IAI47_09820	0.30	+0.1
2,078,048	+		IAI47_09820	0.30	+0.8
2,078,048	+		IAI47_09820	0.30	+0.1
2,078,048	+		IAI47_09820	0.30	+0.5
2,078,049	-		IAI47_09820	0.30	+1.2
2,078,049	-		IAI47_09820	0.30	-0.8
2,078,049	-		IAI47_09820	0.30	+0.8
2,078,059	+		IAI47_09820	0.30	+0.1
2,078,059	+		IAI47_09820	0.30	+1.1
2,078,059	+		IAI47_09820	0.30	+1.1
2,078,059	+		IAI47_09820	0.30	+0.5
2,078,059	+		IAI47_09820	0.30	-0.2
2,078,059	+		IAI47_09820	0.30	-0.3
2,078,059	+		IAI47_09820	0.30	-0.3
2,078,059	+		IAI47_09820	0.30	+0.9
2,078,059	+		IAI47_09820	0.30	+0.4
2,078,059	+		IAI47_09820	0.30	-0.3
2,078,060	-		IAI47_09820	0.31	+1.4
2,078,060	-		IAI47_09820	0.31	+1.4
2,078,060	-		IAI47_09820	0.31	+0.6
2,078,060	-		IAI47_09820	0.31	+0.2
2,078,060	-		IAI47_09820	0.31	+1.0
2,078,063	+		IAI47_09820	0.31	+1.6
2,078,063	+		IAI47_09820	0.31	-0.5
2,078,063	+		IAI47_09820	0.31	-0.6
2,078,063	+		IAI47_09820	0.31	+0.8
2,078,063	+		IAI47_09820	0.31	-0.2
2,078,063	+		IAI47_09820	0.31	-0.4
2,078,063	+		IAI47_09820	0.31	+1.6
2,078,063	+		IAI47_09820	0.31	-0.9
2,078,064	-		IAI47_09820	0.31	+0.8
2,078,064	-		IAI47_09820	0.31	-1.5
2,078,064	-		IAI47_09820	0.31	-1.5
2,078,064	-		IAI47_09820	0.31	-0.8
2,078,064	-		IAI47_09820	0.31	+0.5
2,078,137	+		IAI47_09820	0.34	+0.6
2,078,138	-		IAI47_09820	0.34	+0.3
2,078,138	-		IAI47_09820	0.34	+1.5
2,078,138	-		IAI47_09820	0.34	-0.2
2,078,289	-		IAI47_09820	0.40	+0.2
2,078,321	+		IAI47_09820	0.42	-0.8
2,078,321	+		IAI47_09820	0.42	-0.3
2,078,322	-		IAI47_09820	0.42	+1.8
2,078,322	-		IAI47_09820	0.42	-0.8
2,078,322	-		IAI47_09820	0.42	+0.4
2,078,322	-		IAI47_09820	0.42	+0.2