Strain Fitness in Pantoea sp. MT58 around IAI47_12855

Experiment: Ying_Nucleobase14 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Nucleobase14 rep A; time point 2
2,712,640	-				+0.5
2,712,650	-				+0.2
2,712,650	-				-0.6
2,712,660	-				-0.6
2,712,670	-				-0.3
2,713,391	-				-0.9
2,713,405	+				-2.2
2,713,405	+				-0.7
2,713,406	-				-0.9
2,713,406	-				+0.1
2,713,406	-				-0.4
2,713,406	-				+0.1
2,713,406	-				+0.6
2,713,406	-				+1.0
2,713,406	-				-0.4
2,713,414	+				-0.0
2,713,459	+				-0.4
2,713,459	+				-0.2
2,713,463	+				+0.3
2,713,463	+				-0.0
2,713,463	+				+1.1
2,713,464	-				-2.3
2,713,543	+				+0.5
2,713,543	+				-0.9
2,713,543	+				-0.7
2,713,543	+				-0.7
2,713,543	+				+0.1
2,713,543	+				+2.8
2,713,543	+				-0.1
2,713,544	-				-0.0
2,713,544	-				+0.2
2,713,544	-				-0.0
2,713,544	-				+0.2