Strain Fitness in Pantoea sp. MT58 around IAI47_14770

Experiment: Ying_OrganicAcid7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 2
3,114,079	-				-0.6
3,115,036	-				+0.2
3,115,036	-				+0.1
3,115,036	-				-0.2
3,115,036	-				-1.2
3,115,041	-				-0.8
3,115,041	-				-0.2
3,115,078	+				+0.4
3,115,079	-				-1.2
3,116,259	-		IAI47_14775	0.17	-0.2
3,116,261	-		IAI47_14775	0.18	-0.3
3,116,261	-		IAI47_14775	0.18	-1.2
3,116,261	-		IAI47_14775	0.18	+0.2
3,116,261	-		IAI47_14775	0.18	-1.3
3,116,261	-		IAI47_14775	0.18	+0.8
3,116,261	-		IAI47_14775	0.18	-0.8
3,116,271	-		IAI47_14775	0.20	-0.1
3,116,316	-		IAI47_14775	0.30	-2.4
3,116,361	-		IAI47_14775	0.40	-1.1
3,116,447	+		IAI47_14775	0.59	+0.4
3,116,448	-		IAI47_14775	0.59	-0.6
3,116,740	+				+0.5
3,116,767	-				-0.2
3,116,767	-				-0.8
3,116,774	-				-0.0
3,116,816	+				-0.8
3,116,816	+				-1.0
3,116,816	+				-0.1
3,116,816	+				-0.3
3,116,816	+				+0.0
3,116,817	-				+0.6
3,116,817	-				-0.6
3,116,817	-				+1.0
3,116,817	-				-1.6
3,116,817	-				-1.1
3,116,891	+		IAI47_14780	0.17	-1.8
3,116,892	-		IAI47_14780	0.17	-0.8
3,116,912	+		IAI47_14780	0.22	+0.2
3,117,032	+		IAI47_14780	0.49	+1.0
3,117,032	+		IAI47_14780	0.49	-0.4
3,117,032	+		IAI47_14780	0.49	+0.5
3,117,033	-		IAI47_14780	0.49	+1.8
3,117,033	-		IAI47_14780	0.49	+0.1
3,117,080	+		IAI47_14780	0.60	+0.2
3,117,081	-		IAI47_14780	0.60	+0.9
3,117,081	-		IAI47_14780	0.60	-1.2
3,117,102	+		IAI47_14780	0.65	+0.2
3,117,103	-		IAI47_14780	0.65	+0.2
3,117,103	-		IAI47_14780	0.65	+0.4
3,117,122	+		IAI47_14780	0.70	+0.5
3,117,150	+		IAI47_14780	0.76	+1.1
3,117,150	+		IAI47_14780	0.76	+1.4
3,117,168	+		IAI47_14780	0.80	-0.2
3,117,168	+		IAI47_14780	0.80	+0.4
3,117,169	-		IAI47_14780	0.80	+0.8
3,117,169	-		IAI47_14780	0.80	-0.7
3,117,169	-		IAI47_14780	0.80	-1.2
3,117,170	+		IAI47_14780	0.81	+0.9
3,117,170	+		IAI47_14780	0.81	+1.4
3,117,170	+		IAI47_14780	0.81	-0.2
3,117,170	+		IAI47_14780	0.81	+2.0
3,117,171	-		IAI47_14780	0.81	-1.0