Strain Fitness in Pantoea sp. MT58 around IAI47_16890

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
3,575,994	+		IAI47_16885	0.34	+0.7
3,575,994	+		IAI47_16885	0.34	-0.6
3,575,994	+		IAI47_16885	0.34	-0.9
3,575,994	+		IAI47_16885	0.34	-1.5
3,575,995	-		IAI47_16885	0.34	-0.6
3,575,995	-		IAI47_16885	0.34	-0.7
3,575,995	-		IAI47_16885	0.34	+1.0
3,575,997	+		IAI47_16885	0.34	+0.4
3,575,997	+		IAI47_16885	0.34	+0.3
3,575,997	+		IAI47_16885	0.34	-0.7
3,576,040	+		IAI47_16885	0.37	-0.6
3,576,040	+		IAI47_16885	0.37	+1.3
3,576,041	-		IAI47_16885	0.37	-0.2
3,576,041	-		IAI47_16885	0.37	+0.8
3,576,041	-		IAI47_16885	0.37	+0.7
3,576,041	-		IAI47_16885	0.37	+0.3
3,576,043	+		IAI47_16885	0.38	-1.6
3,576,043	+		IAI47_16885	0.38	-1.0
3,576,043	+		IAI47_16885	0.38	-2.2
3,576,043	+		IAI47_16885	0.38	-1.2
3,576,043	+		IAI47_16885	0.38	-2.3
3,576,044	-		IAI47_16885	0.38	-1.2
3,576,044	-		IAI47_16885	0.38	+0.6
3,576,055	-		IAI47_16885	0.38	+0.0
3,576,077	+		IAI47_16885	0.40	-0.7
3,576,211	+		IAI47_16885	0.50	-1.2
3,576,213	+		IAI47_16885	0.50	-1.0
3,576,213	+		IAI47_16885	0.50	-0.6
3,576,213	+		IAI47_16885	0.50	+0.6
3,576,214	-		IAI47_16885	0.50	+0.1
3,576,214	-		IAI47_16885	0.50	+0.4
3,576,214	-		IAI47_16885	0.50	-0.3
3,576,214	-		IAI47_16885	0.50	-0.3
3,576,294	+		IAI47_16885	0.56	+0.9
3,576,295	-		IAI47_16885	0.56	-1.5
3,576,304	+		IAI47_16885	0.56	+0.1
3,576,305	-		IAI47_16885	0.56	+0.3
3,576,318	+		IAI47_16885	0.57	-0.2
3,576,318	+		IAI47_16885	0.57	+0.3
3,576,318	+		IAI47_16885	0.57	+0.3
3,576,319	-		IAI47_16885	0.58	+0.3
3,576,319	-		IAI47_16885	0.58	-0.4
3,576,319	-		IAI47_16885	0.58	-0.5
3,576,326	-		IAI47_16885	0.58	+1.1
3,576,327	+		IAI47_16885	0.58	-0.5
3,576,327	+		IAI47_16885	0.58	+0.6
3,576,327	+		IAI47_16885	0.58	+0.5
3,576,327	+		IAI47_16885	0.58	-0.4
3,576,328	-		IAI47_16885	0.58	-0.7
3,576,328	-		IAI47_16885	0.58	-1.2
3,576,349	-		IAI47_16885	0.60	+0.8
3,576,349	-		IAI47_16885	0.60	-1.5
3,576,349	-		IAI47_16885	0.60	-0.6
3,576,349	-		IAI47_16885	0.60	-0.2
3,576,387	+		IAI47_16885	0.62	-0.5
3,576,387	+		IAI47_16885	0.62	+1.4
3,576,591	-		IAI47_16885	0.77	-0.4
3,576,603	+		IAI47_16885	0.78	-1.2
3,576,603	+		IAI47_16885	0.78	+1.0
3,576,675	+		IAI47_16885	0.83	-0.2
3,576,675	+		IAI47_16885	0.83	+0.5
3,576,675	+		IAI47_16885	0.83	-0.7
3,576,676	-		IAI47_16885	0.83	+1.2
3,576,676	-		IAI47_16885	0.83	-0.0
3,576,683	+		IAI47_16885	0.84	+1.1
3,576,683	+		IAI47_16885	0.84	+1.4
3,576,683	+		IAI47_16885	0.84	+0.2
3,576,683	+		IAI47_16885	0.84	+0.3
3,576,683	+		IAI47_16885	0.84	+0.8
3,576,684	-		IAI47_16885	0.84	-0.2
3,576,684	-		IAI47_16885	0.84	-0.9
3,576,684	-		IAI47_16885	0.84	+0.3
3,576,741	+		IAI47_16885	0.88	+0.6
3,576,741	+		IAI47_16885	0.88	+0.0
3,576,742	-		IAI47_16885	0.88	+0.0
3,576,742	-		IAI47_16885	0.88	+0.3
3,576,811	+				+0.6
3,576,811	+				-0.4
3,576,811	+				+0.3
3,576,811	+				-0.8
3,576,812	-				-0.2
3,576,812	-				+1.3
3,576,812	-				-0.9
3,576,812	-				+1.3
3,576,812	-				-0.7
3,576,812	-				-1.3
3,576,812	-				+1.8
3,576,813	+				+0.3
3,576,813	+				-0.6
3,576,814	-				-1.6
3,576,814	-				+0.8
3,576,814	-				-1.0
3,576,814	-				+1.0
3,576,830	+				+0.3
3,576,830	+				-1.3
3,576,831	-				-0.0
3,576,831	-				+0.3
3,576,863	-				+0.1
3,576,981	+				+1.8
3,576,982	-				+0.3
3,576,982	-				-0.7
3,576,982	-				+0.6
3,576,982	-				-0.6
3,576,982	-				-0.1
3,577,019	-				+0.8
3,577,372	+		IAI47_16890	0.15	+0.1
3,577,372	+		IAI47_16890	0.15	+1.2
3,577,372	+		IAI47_16890	0.15	-1.1
3,577,372	+		IAI47_16890	0.15	+0.4
3,577,373	-		IAI47_16890	0.15	+1.8
3,577,374	+		IAI47_16890	0.15	+1.7
3,577,374	+		IAI47_16890	0.15	+0.3
3,577,374	+		IAI47_16890	0.15	+1.8
3,577,374	+		IAI47_16890	0.15	+0.5
3,577,374	+		IAI47_16890	0.15	-0.6
3,577,374	+		IAI47_16890	0.15	-1.0
3,577,374	+		IAI47_16890	0.15	-0.8
3,577,374	+		IAI47_16890	0.15	+0.1
3,577,374	+		IAI47_16890	0.15	+0.4
3,577,374	+		IAI47_16890	0.15	+0.2
3,577,374	+		IAI47_16890	0.15	-0.2
3,577,374	+		IAI47_16890	0.15	-0.4
3,577,374	+		IAI47_16890	0.15	-0.3
3,577,374	+		IAI47_16890	0.15	+0.5
3,577,374	+		IAI47_16890	0.15	+1.1
3,577,374	+		IAI47_16890	0.15	+1.2
3,577,374	+		IAI47_16890	0.15	-0.6
3,577,374	+		IAI47_16890	0.15	-0.1
3,577,374	+		IAI47_16890	0.15	-0.2
3,577,374	+		IAI47_16890	0.15	-0.8
3,577,374	+		IAI47_16890	0.15	-0.2
3,577,374	+		IAI47_16890	0.15	-0.1
3,577,374	+		IAI47_16890	0.15	+0.1
3,577,374	+		IAI47_16890	0.15	+0.8
3,577,374	+		IAI47_16890	0.15	-1.5
3,577,374	+		IAI47_16890	0.15	-0.7
3,577,374	+		IAI47_16890	0.15	+0.4
3,577,375	-		IAI47_16890	0.15	-0.6
3,577,375	-		IAI47_16890	0.15	+0.2
3,577,375	-		IAI47_16890	0.15	-0.2
3,577,375	-		IAI47_16890	0.15	+0.3
3,577,375	-		IAI47_16890	0.15	+0.0
3,577,375	-		IAI47_16890	0.15	-0.3
3,577,375	-		IAI47_16890	0.15	-0.7
3,577,375	-		IAI47_16890	0.15	+0.0
3,577,375	-		IAI47_16890	0.15	-0.6
3,577,375	-		IAI47_16890	0.15	+1.0
3,577,375	-		IAI47_16890	0.15	-0.0
3,577,375	-		IAI47_16890	0.15	+1.4
3,577,375	-		IAI47_16890	0.15	+1.4
3,577,375	-		IAI47_16890	0.15	-0.5
3,577,375	-		IAI47_16890	0.15	+0.1
3,577,375	-		IAI47_16890	0.15	+0.3
3,577,375	-		IAI47_16890	0.15	-1.1
3,577,375	-		IAI47_16890	0.15	+0.8
3,577,375	-		IAI47_16890	0.15	+0.4
3,577,375	-		IAI47_16890	0.15	+1.1
3,577,375	-		IAI47_16890	0.15	+0.1
3,577,375	-		IAI47_16890	0.15	-0.4
3,577,375	-		IAI47_16890	0.15	-1.4
3,577,375	-		IAI47_16890	0.15	+0.2
3,577,383	+		IAI47_16890	0.15	+0.8
3,577,383	+		IAI47_16890	0.15	+0.3
3,577,383	+		IAI47_16890	0.15	-0.4
3,577,383	+		IAI47_16890	0.15	-0.2
3,577,383	+		IAI47_16890	0.15	+2.6
3,577,383	+		IAI47_16890	0.15	-1.9
3,577,384	-		IAI47_16890	0.15	+1.4
3,577,384	-		IAI47_16890	0.15	-0.2
3,577,404	+		IAI47_16890	0.16	-2.4
3,577,404	+		IAI47_16890	0.16	+3.6
3,577,404	+		IAI47_16890	0.16	-1.7
3,577,404	+		IAI47_16890	0.16	-0.6
3,577,404	+		IAI47_16890	0.16	+1.4
3,577,405	-		IAI47_16890	0.16	-0.2
3,577,405	-		IAI47_16890	0.16	-1.2
3,577,516	+		IAI47_16890	0.20	-1.6
3,577,531	+		IAI47_16890	0.20	+0.4
3,577,532	-		IAI47_16890	0.20	-1.2
3,577,532	-		IAI47_16890	0.20	-0.2
3,577,538	+		IAI47_16890	0.20	+1.5
3,577,576	+		IAI47_16890	0.21	+0.3
3,577,576	+		IAI47_16890	0.21	+0.2
3,577,576	+		IAI47_16890	0.21	+2.4
3,577,576	+		IAI47_16890	0.21	-0.3
3,577,577	-		IAI47_16890	0.21	-2.5
3,577,688	-		IAI47_16890	0.25	+0.3
3,577,695	+		IAI47_16890	0.25	+0.4
3,577,695	+		IAI47_16890	0.25	+1.6
3,577,695	+		IAI47_16890	0.25	+1.1
3,577,695	+		IAI47_16890	0.25	-0.0
3,577,695	+		IAI47_16890	0.25	-0.3
3,577,695	+		IAI47_16890	0.25	-0.4
3,577,695	+		IAI47_16890	0.25	+0.2
3,577,695	+		IAI47_16890	0.25	+0.1
3,577,695	+		IAI47_16890	0.25	-0.5
3,577,695	+		IAI47_16890	0.25	-0.2
3,577,695	+		IAI47_16890	0.25	-1.0
3,577,695	+		IAI47_16890	0.25	+1.7
3,577,696	-		IAI47_16890	0.25	+0.0
3,577,696	-		IAI47_16890	0.25	+0.8
3,577,696	-		IAI47_16890	0.25	-0.2
3,577,696	-		IAI47_16890	0.25	+2.2
3,577,696	-		IAI47_16890	0.25	-0.5
3,577,696	-		IAI47_16890	0.25	+0.4
3,577,707	-		IAI47_16890	0.26	+0.8
3,577,707	-		IAI47_16890	0.26	+1.5
3,577,759	-		IAI47_16890	0.27	+0.2
3,577,759	-		IAI47_16890	0.27	-0.4
3,577,759	-		IAI47_16890	0.27	-1.3
3,577,759	-		IAI47_16890	0.27	+0.3
3,577,777	-		IAI47_16890	0.28	+0.4
3,577,777	-		IAI47_16890	0.28	+0.4
3,577,810	+		IAI47_16890	0.29	+0.8
3,577,811	-		IAI47_16890	0.29	+0.1
3,577,811	-		IAI47_16890	0.29	+0.3
3,577,811	-		IAI47_16890	0.29	+0.9
3,577,822	+		IAI47_16890	0.29	-1.5
3,577,822	+		IAI47_16890	0.29	+0.5
3,577,822	+		IAI47_16890	0.29	-2.5
3,577,823	-		IAI47_16890	0.29	+0.7
3,577,823	-		IAI47_16890	0.29	+0.8
3,577,916	+		IAI47_16890	0.32	-0.8
3,577,916	+		IAI47_16890	0.32	-0.3
3,577,917	-		IAI47_16890	0.32	+0.8
3,577,917	-		IAI47_16890	0.32	+0.7
3,577,917	-		IAI47_16890	0.32	-0.8
3,577,917	-		IAI47_16890	0.32	-0.5
3,577,924	+		IAI47_16890	0.33	-0.6
3,577,924	+		IAI47_16890	0.33	+0.9
3,577,925	-		IAI47_16890	0.33	+0.5
3,577,925	-		IAI47_16890	0.33	+0.5
3,577,925	-		IAI47_16890	0.33	+0.6
3,578,007	+		IAI47_16890	0.35	-1.3
3,578,007	+		IAI47_16890	0.35	+0.4
3,578,007	+		IAI47_16890	0.35	+0.4
3,578,007	+		IAI47_16890	0.35	-1.3
3,578,008	-		IAI47_16890	0.35	-0.3
3,578,008	-		IAI47_16890	0.35	-1.4
3,578,013	+		IAI47_16890	0.36	+1.1
3,578,013	+		IAI47_16890	0.36	-0.2
3,578,014	-		IAI47_16890	0.36	-2.2
3,578,014	-		IAI47_16890	0.36	-2.2
3,578,014	-		IAI47_16890	0.36	-0.6
3,578,029	+		IAI47_16890	0.36	-0.4
3,578,030	-		IAI47_16890	0.36	-1.2
3,578,030	-		IAI47_16890	0.36	-0.3
3,578,146	+		IAI47_16890	0.40	-1.5
3,578,257	+		IAI47_16890	0.43	-0.9
3,578,257	+		IAI47_16890	0.43	-0.7
3,578,371	+		IAI47_16890	0.47	-0.4
3,578,371	+		IAI47_16890	0.47	-1.2
3,578,372	-		IAI47_16890	0.47	+1.1
3,578,372	-		IAI47_16890	0.47	-1.4
3,578,372	-		IAI47_16890	0.47	+0.2
3,578,461	-		IAI47_16890	0.50	-0.6
3,578,502	+		IAI47_16890	0.51	+0.8
3,578,543	+		IAI47_16890	0.53	-2.2
3,578,544	-		IAI47_16890	0.53	-0.1
3,578,544	-		IAI47_16890	0.53	+1.2
3,578,674	+		IAI47_16890	0.57	-0.8
3,578,773	+		IAI47_16890	0.60	-0.5
3,578,773	+		IAI47_16890	0.60	+1.3
3,578,773	+		IAI47_16890	0.60	-0.5
3,578,774	-		IAI47_16890	0.60	-0.8
3,578,774	-		IAI47_16890	0.60	+1.1
3,578,785	+		IAI47_16890	0.60	-0.2
3,578,785	+		IAI47_16890	0.60	-2.2
3,578,785	+		IAI47_16890	0.60	+1.8
3,578,868	+		IAI47_16890	0.63	+0.7
3,578,868	+		IAI47_16890	0.63	+0.6
3,578,868	+		IAI47_16890	0.63	-0.2
3,578,869	-		IAI47_16890	0.63	+0.3
3,578,880	+		IAI47_16890	0.63	-0.5
3,578,880	+		IAI47_16890	0.63	+0.5
3,578,880	+		IAI47_16890	0.63	+1.8
3,578,880	+		IAI47_16890	0.63	+1.4
3,578,880	+		IAI47_16890	0.63	+1.7
3,578,880	+		IAI47_16890	0.63	+1.3
3,578,881	-		IAI47_16890	0.64	-0.2
3,578,881	-		IAI47_16890	0.64	-0.0
3,578,881	-		IAI47_16890	0.64	-0.0
3,579,018	+		IAI47_16890	0.68	-0.7
3,579,018	+		IAI47_16890	0.68	-0.2
3,579,018	+		IAI47_16890	0.68	+0.2
3,579,018	+		IAI47_16890	0.68	+0.7
3,579,019	-		IAI47_16890	0.68	-0.4
3,579,019	-		IAI47_16890	0.68	-0.1
3,579,019	-		IAI47_16890	0.68	-0.5
3,579,019	-		IAI47_16890	0.68	-0.2
3,579,019	-		IAI47_16890	0.68	-0.2
3,579,019	-		IAI47_16890	0.68	+0.0
3,579,019	-		IAI47_16890	0.68	+0.3
3,579,019	-		IAI47_16890	0.68	+1.4
3,579,019	-		IAI47_16890	0.68	-0.6
3,579,019	-		IAI47_16890	0.68	+2.2
3,579,019	-		IAI47_16890	0.68	+0.8
3,579,019	-		IAI47_16890	0.68	+0.4
3,579,157	+		IAI47_16890	0.72	+3.0
3,579,157	+		IAI47_16890	0.72	-1.9
3,579,157	+		IAI47_16890	0.72	+1.6
3,579,158	-		IAI47_16890	0.72	-0.2
3,579,158	-		IAI47_16890	0.72	-0.7
3,579,205	-		IAI47_16890	0.74	-1.3
3,579,205	-		IAI47_16890	0.74	-0.1
3,579,225	+		IAI47_16890	0.75	+0.6
3,579,225	+		IAI47_16890	0.75	-1.2
3,579,225	+		IAI47_16890	0.75	+0.4
3,579,225	+		IAI47_16890	0.75	-0.6
3,579,226	-		IAI47_16890	0.75	+0.8
3,579,226	-		IAI47_16890	0.75	-0.1
3,579,549	+		IAI47_16890	0.85	+0.3
3,579,549	+		IAI47_16890	0.85	+0.2
3,579,549	+		IAI47_16890	0.85	+0.6
3,579,549	+		IAI47_16890	0.85	+1.1
3,579,550	-		IAI47_16890	0.85	+0.8
3,579,550	-		IAI47_16890	0.85	-1.7
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