Strain Fitness in Pantoea sp. MT58 around IAI47_21880

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
126,844	-				-0.0
126,844	-				+1.0
126,857	+				-1.6
126,857	+				-0.5
126,857	+				-0.0
126,857	+				-0.4
126,857	+				+1.0
126,858	-				+0.0
126,858	-				-0.5
126,868	-				+1.0
128,780	-		IAI47_21880	0.79	-1.7
129,059	-				+0.0
129,059	-				-0.4
129,059	-				-1.4
129,129	-				-0.3
129,129	-				+1.0
129,129	-				-0.5
129,157	+				-1.0
129,157	+				+2.0
129,158	-				-0.3
129,223	+				-0.5
129,224	-				-1.8
129,231	+				+0.7
129,231	+				+2.0
129,231	+				+0.2
129,232	-				-0.5
129,232	-				+0.5
129,274	-				-1.5
129,274	-				-0.7
129,274	-				+0.6
129,274	-				+0.2
129,275	+				-1.8
129,275	+				-1.0
129,286	-				-1.0
129,286	-				-0.1
129,297	-				+1.0
129,427	+				-0.5
129,428	-				-0.5
129,428	-				-0.8
129,428	-				+1.0
129,431	+				+0.2
129,432	-				-0.5
129,478	+				-0.2
129,508	+				+0.7
129,508	+				-0.2
129,509	-				+0.7
129,517	+				-1.3
129,548	+				+0.6
129,548	+				+0.5
129,549	-				-0.2
129,549	-				-0.0
129,572	+				+0.0
129,572	+				+1.9
129,598	+				+1.0
129,599	-				-1.0
129,599	-				+1.0
129,599	-				+0.0
129,601	-				+2.4
129,631	+				-0.5
129,631	+				+1.0
129,632	-				+0.5
129,632	-				+0.3
129,633	+				-0.8
129,634	-				+0.8
129,636	+				-1.5
129,637	-				+1.9
129,637	-				+0.9
129,637	-				+0.0
129,637	-				+0.3
129,641	+				+1.0
129,641	+				-0.8
129,642	-				-0.2
129,659	+				-2.0
129,659	+				-0.2
129,659	+				+1.0
129,659	+				-0.4
129,659	+				+1.0
129,659	+				-0.5
129,659	+				+0.5
129,662	+				+0.0
129,662	+				+1.6
129,662	+				-0.7
129,662	+				-0.3
129,663	-				+2.0
129,663	-				+2.6
129,663	-				+1.0
129,663	-				+0.7
129,663	-				+0.3
129,663	-				-0.3
129,663	-				+0.0
129,666	+				+0.5
129,667	-				+3.4
129,667	-				-0.1
129,667	-				-0.2
129,690	+				-0.2
129,690	+				-0.7
129,690	+				+1.4
129,690	+				-0.3
129,690	+				-1.3
129,690	+				+0.8
129,691	-				+0.4
129,691	-				+0.2
129,691	-				-0.4
129,742	+				+0.2
129,743	-				+1.0
129,771	+				-1.5
129,771	+				-0.5
129,771	+				-0.3
129,771	+				-0.4
129,771	+				+0.8
129,771	+				-0.1
129,772	-				+1.0
129,772	-				-1.3
129,772	-				+1.0
129,772	-				-0.4
129,772	-				+0.0
129,772	-				+0.0
129,772	-				-1.5
129,772	-				+0.5
129,775	+				+1.0
129,775	+				+1.0
129,775	+				-0.8
129,775	+				-0.3
129,775	+				-1.5
129,775	+				+3.4
129,775	+				+0.0
129,775	+				+1.0
129,775	+				+0.0
129,775	+				+0.3
129,776	-				-2.1
129,776	-				+0.0
129,777	+				+0.0
129,777	+				+0.5
129,777	+				-1.5
129,778	-				-0.3
129,778	-				+1.4
129,816	+				-1.5
129,817	-				-1.0
129,817	-				-0.4
129,830	+				-0.8
129,830	+				+1.6
129,830	+				-0.8
129,831	-				-0.5
129,831	-				-1.2
129,831	-				+0.3
129,834	+				+0.5
129,834	+				-1.3
129,834	+				+0.3
129,835	-				+0.8
129,835	-				-0.8
129,835	-				-1.8
129,835	-				-0.1
129,835	-				+0.6
129,835	-				+2.9
129,851	+				-2.0
129,857	-				-0.4
129,857	-				+0.5
129,857	-				+1.6
129,873	-				+0.2
129,873	-				-0.2
129,917	+				+0.2
129,918	-				-2.3
129,998	+				+0.8
129,999	-				-0.5
129,999	-				+1.6
130,001	+				+3.4
130,002	-				-0.7