Strain Fitness in Pantoea sp. MT58 around IAI47_14325

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
3,025,419	+				+0.9
3,025,419	+				+0.6
3,025,420	-				-0.2
3,025,420	-				+0.8
3,025,435	+				-0.1
3,025,436	-				-0.6
3,025,436	-				-0.7
3,025,436	-				-0.4
3,026,363	+				-0.3
3,026,363	+				-0.2
3,026,363	+				-1.4
3,026,364	-				-1.3
3,026,364	-				-0.7
3,026,377	-				-0.0
3,026,432	-		IAI47_14325	0.25	+1.1
3,026,522	+		IAI47_14325	0.67	-0.7
3,026,523	-		IAI47_14325	0.68	-1.2
3,026,590	-				-0.2
3,026,590	-				-1.5
3,026,590	-				-0.2
3,026,617	+				+0.3
3,026,618	-				+1.2
3,026,620	+				-0.7
3,026,621	-				-0.2
3,026,621	-				+0.1
3,026,675	+				+0.3
3,026,675	+				-0.3
3,026,676	-				+1.1
3,026,676	-				+2.2
3,026,690	+				-0.1
3,026,691	-				-0.2
3,026,691	-				-0.4
3,026,691	-				+0.6
3,026,691	-				-1.2
3,026,691	-				+0.0
3,026,749	+		IAI47_14330	0.12	+0.4
3,026,749	+		IAI47_14330	0.12	-0.2
3,026,750	-		IAI47_14330	0.12	-2.0
3,026,750	-		IAI47_14330	0.12	+2.0
3,026,831	+		IAI47_14330	0.19	-0.8
3,026,832	-		IAI47_14330	0.19	+0.1
3,027,008	+		IAI47_14330	0.35	-0.5
3,027,158	-		IAI47_14330	0.49	+0.3
3,027,255	+		IAI47_14330	0.57	-0.9
3,027,255	+		IAI47_14330	0.57	-2.0
3,027,256	-		IAI47_14330	0.58	-0.2
3,027,443	-		IAI47_14330	0.74	+1.8
3,027,443	-		IAI47_14330	0.74	-0.5
3,027,450	-		IAI47_14330	0.75	-0.4