Strain Fitness in Pantoea sp. MT58 around IAI47_13690

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,898,670	-		IAI47_13685	0.33	-1.5
2,898,772	-		IAI47_13685	0.41	-3.1
2,898,972	-		IAI47_13685	0.56	-2.2
2,899,546	-				-3.0
2,899,554	+				-0.5
2,899,555	-				-0.6
2,899,555	-				+0.5
2,899,555	-				+0.2
2,899,576	-				-0.2
2,899,576	-				+1.1
2,899,604	+				-1.2
2,899,605	-				-0.6
2,899,605	-				+0.2
2,899,605	-				+0.2
2,899,605	-				-0.2
2,899,605	-				-1.5
2,899,605	-				-0.8
2,899,611	+				-2.0
2,899,611	+				-0.8
2,899,611	+				-1.5
2,899,611	+				+1.4
2,899,611	+				-1.4
2,899,611	+				-2.6
2,899,611	+				-0.2
2,899,611	+				-0.5
2,899,611	+				-2.3
2,899,611	+				-1.5
2,899,611	+				-1.5
2,899,611	+				-1.8
2,899,611	+				-1.5
2,899,611	+				-2.3
2,899,611	+				-1.3
2,899,611	+				-1.2
2,899,612	-				+0.3
2,899,612	-				+1.2
2,899,612	-				+0.8
2,899,612	-				-0.3
2,899,612	-				+1.2
2,899,612	-				+1.4
2,899,612	-				+1.7
2,899,612	-				+1.8
2,899,612	-				+0.8
2,899,612	-				-0.6
2,899,612	-				-0.3
2,899,612	-				-0.8
2,899,612	-				+1.1
2,899,612	-				+0.4
2,899,612	-				+0.4
2,899,612	-				+2.5
2,899,612	-				+0.4
2,899,612	-				+0.6
2,899,612	-				-0.9
2,899,612	-				-1.0
2,899,612	-				+0.8
2,899,612	-				+0.3
2,899,612	-				+0.5
2,899,612	-				+2.0
2,899,612	-				+0.5
2,899,615	+				+0.2
2,899,616	-				+0.6
2,899,616	-				-0.6
2,899,616	-				+0.1
2,899,626	-				+0.6
2,899,626	-				-0.2
2,899,626	-				+1.1
2,899,626	-				-1.0
2,899,626	-				+0.3
2,899,626	-				-2.2
2,899,631	+				-3.3
2,899,631	+				-0.8
2,899,631	+				-2.6
2,899,631	+				-0.8
2,899,632	-				+0.4
2,899,632	-				-2.8
2,899,632	-				+0.5
2,899,632	-				-0.6
2,899,632	-				-0.2
2,899,659	+				-0.6
2,899,659	+				+0.2
2,899,660	-				-0.2
2,899,660	-				+0.1
2,899,660	-				+0.2
2,899,669	+				-0.2
2,899,670	-				-0.2
2,899,691	-				-0.2
2,899,908	+		IAI47_13690	0.19	-1.8
2,901,022	-				-0.7
2,901,022	-				+0.1
2,901,386	+		IAI47_13695	0.85	-1.8
2,901,460	-				+0.3
2,901,460	-				+0.1
2,901,460	-				+0.6
2,901,464	-				+0.7
2,901,464	-				+0.2
2,901,464	-				+0.0
2,901,468	-				+0.2
2,901,468	-				+0.9
2,901,468	-				+2.2
2,901,474	-				-0.8
2,901,574	+		IAI47_13700	0.16	-0.2
2,901,575	-		IAI47_13700	0.16	-1.5
2,901,575	-		IAI47_13700	0.16	-0.8
2,901,690	-		IAI47_13700	0.33	-1.2
2,901,734	-		IAI47_13700	0.40	-1.5
2,901,734	-		IAI47_13700	0.40	-1.5
2,901,837	-		IAI47_13700	0.55	-0.8
2,901,887	+		IAI47_13700	0.62	-1.3
2,901,953	-		IAI47_13700	0.71	-1.3
2,901,953	-		IAI47_13700	0.71	-2.3