Strain Fitness in Pantoea sp. MT58 around IAI47_12495

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
2,632,397	+				-1.0
2,632,397	+				-0.1
2,632,397	+				-0.1
2,632,398	-				-0.2
2,632,398	-				-0.8
2,632,398	-				-0.6
2,632,398	-				-0.5
2,632,398	-				-1.2
2,632,424	+				+0.8
2,632,424	+				+0.6
2,632,440	+				+0.2
2,632,475	+				-0.0
2,632,475	+				-0.5
2,632,475	+				+0.2
2,632,475	+				+0.0
2,632,527	+		IAI47_12490	0.16	-1.5
2,632,527	+		IAI47_12490	0.16	-0.4
2,632,527	+		IAI47_12490	0.16	+0.0
2,632,527	+		IAI47_12490	0.16	+0.9
2,632,527	+		IAI47_12490	0.16	-0.9
2,632,527	+		IAI47_12490	0.16	+0.4
2,632,527	+		IAI47_12490	0.16	+0.2
2,632,527	+		IAI47_12490	0.16	-1.4
2,632,527	+		IAI47_12490	0.16	-0.7
2,632,527	+		IAI47_12490	0.16	-0.1
2,632,527	+		IAI47_12490	0.16	+0.5
2,632,527	+		IAI47_12490	0.16	+0.8
2,632,527	+		IAI47_12490	0.16	-0.4
2,632,527	+		IAI47_12490	0.16	+1.2
2,632,527	+		IAI47_12490	0.16	-1.1
2,632,528	-		IAI47_12490	0.16	+0.8
2,632,528	-		IAI47_12490	0.16	+0.0
2,632,528	-		IAI47_12490	0.16	-0.2
2,632,528	-		IAI47_12490	0.16	+0.2
2,632,528	-		IAI47_12490	0.16	-0.6
2,632,528	-		IAI47_12490	0.16	-1.1
2,632,528	-		IAI47_12490	0.16	-0.8
2,632,528	-		IAI47_12490	0.16	+2.2
2,632,528	-		IAI47_12490	0.16	-1.2
2,632,528	-		IAI47_12490	0.16	+0.4
2,632,528	-		IAI47_12490	0.16	-0.6
2,632,531	+		IAI47_12490	0.17	-0.9
2,632,531	+		IAI47_12490	0.17	-0.7
2,632,531	+		IAI47_12490	0.17	+0.8
2,632,531	+		IAI47_12490	0.17	-0.0
2,632,531	+		IAI47_12490	0.17	-1.4
2,632,532	-		IAI47_12490	0.17	+0.4
2,632,532	-		IAI47_12490	0.17	+0.1
2,632,532	-		IAI47_12490	0.17	-0.8
2,632,532	-		IAI47_12490	0.17	+0.4
2,632,644	+		IAI47_12490	0.33	+0.7
2,632,667	+		IAI47_12490	0.36	-0.5
2,632,667	+		IAI47_12490	0.36	-2.2
2,632,667	+		IAI47_12490	0.36	+1.0
2,632,667	+		IAI47_12490	0.36	-1.1
2,632,667	+		IAI47_12490	0.36	+0.7
2,632,668	-		IAI47_12490	0.36	+0.2
2,632,668	-		IAI47_12490	0.36	-0.4
2,632,668	-		IAI47_12490	0.36	-0.7
2,632,668	-		IAI47_12490	0.36	-0.4
2,632,674	+		IAI47_12490	0.37	+0.5
2,632,674	+		IAI47_12490	0.37	-0.0
2,632,674	+		IAI47_12490	0.37	+0.1
2,632,674	+		IAI47_12490	0.37	-0.5
2,632,675	-		IAI47_12490	0.38	+1.1
2,632,675	-		IAI47_12490	0.38	+0.9
2,632,675	-		IAI47_12490	0.38	+1.2
2,632,685	+		IAI47_12490	0.39	-0.5
2,632,685	+		IAI47_12490	0.39	-2.4
2,632,685	+		IAI47_12490	0.39	-0.9
2,632,685	+		IAI47_12490	0.39	-0.8
2,632,685	+		IAI47_12490	0.39	-1.5
2,632,685	+		IAI47_12490	0.39	+0.3
2,632,685	+		IAI47_12490	0.39	-0.3
2,632,685	+		IAI47_12490	0.39	-0.5
2,632,686	-		IAI47_12490	0.39	+0.4
2,632,686	-		IAI47_12490	0.39	+0.0
2,632,686	-		IAI47_12490	0.39	+2.1
2,632,686	-		IAI47_12490	0.39	-1.3
2,632,686	-		IAI47_12490	0.39	+0.5
2,632,686	-		IAI47_12490	0.39	+1.4
2,632,686	-		IAI47_12490	0.39	-1.1
2,632,686	-		IAI47_12490	0.39	-0.6
2,632,701	+		IAI47_12490	0.41	-0.4
2,632,701	+		IAI47_12490	0.41	+0.4
2,632,701	+		IAI47_12490	0.41	-0.1
2,632,701	+		IAI47_12490	0.41	-0.7
2,632,702	-		IAI47_12490	0.41	-1.2
2,632,702	-		IAI47_12490	0.41	-2.5
2,632,702	-		IAI47_12490	0.41	-0.0
2,632,702	-		IAI47_12490	0.41	-0.6
2,632,726	-		IAI47_12490	0.45	-1.0
2,632,760	+		IAI47_12490	0.50	+0.4
2,632,760	+		IAI47_12490	0.50	-0.8
2,632,760	+		IAI47_12490	0.50	-0.7
2,632,760	+		IAI47_12490	0.50	-0.2
2,632,760	+		IAI47_12490	0.50	-0.4
2,632,760	+		IAI47_12490	0.50	-0.9
2,632,760	+		IAI47_12490	0.50	+0.8
2,632,760	+		IAI47_12490	0.50	-1.2
2,632,761	-		IAI47_12490	0.50	-0.5
2,632,761	-		IAI47_12490	0.50	-0.3
2,632,761	-		IAI47_12490	0.50	+0.1
2,632,761	-		IAI47_12490	0.50	-1.6
2,632,761	-		IAI47_12490	0.50	-0.8
2,632,767	+		IAI47_12490	0.51	+1.5
2,632,783	-		IAI47_12490	0.53	+0.5
2,632,783	-		IAI47_12490	0.53	+0.1
2,632,783	-		IAI47_12490	0.53	+0.4
2,632,863	+		IAI47_12490	0.65	+1.1
2,632,863	+		IAI47_12490	0.65	+0.4
2,632,864	-		IAI47_12490	0.65	+0.4
2,632,864	-		IAI47_12490	0.65	-1.8
2,632,864	-		IAI47_12490	0.65	-0.4
2,632,870	+		IAI47_12490	0.66	+1.1
2,632,870	+		IAI47_12490	0.66	+0.8
2,633,046	+				-0.1
2,633,046	+				-1.2
2,633,046	+				-1.9
2,633,046	+				-0.5
2,633,046	+				-0.2
2,633,047	-				+0.8
2,633,057	-				-0.6
2,633,057	-				+0.5
2,633,057	-				+0.9
2,633,057	-				+1.2
2,633,080	+				-1.0
2,633,080	+				-0.7
2,633,080	+				-0.6
2,633,081	-				-3.1
2,633,081	-				+1.8
2,633,098	-				+0.6
2,633,104	-				+0.8
2,633,109	+				+0.8
2,633,109	+				+0.8
2,633,109	+				-0.1
2,633,110	-				-0.5
2,633,110	-				+0.4
2,633,110	-				-0.3
2,633,110	-				-0.1
2,633,110	-				-0.8
2,633,110	-				-0.5
2,633,132	+				+0.8
2,633,132	+				+0.8
2,633,133	-				+0.8
2,633,187	+				+0.8
2,633,187	+				+1.9
2,633,187	+				-1.2
2,633,187	+				+0.7
2,633,187	+				-1.7
2,633,187	+				+0.5
2,633,188	-				-0.2
2,633,188	-				-0.4
2,633,188	-				+0.5
2,633,188	-				-0.6
2,633,188	-				+1.1
2,633,188	-				-0.1
2,633,188	-				-0.9
2,633,203	-				+1.2
2,633,203	-				-1.3
2,633,219	+				-0.2
2,633,219	+				-0.5
2,633,219	+				+0.4
2,633,219	+				+0.1
2,633,220	-				+2.4
2,633,220	-				+0.7
2,633,220	-				+1.3
2,633,222	+				+0.8
2,633,311	+				+0.4
2,633,311	+				+0.0
2,633,311	+				-1.4
2,633,311	+				-0.8
2,633,311	+				-0.5
2,633,312	-				+0.8
2,633,312	-				-0.4
2,633,312	-				-0.4
2,633,312	-				-1.1
2,633,317	-				+0.6
2,633,335	+				+0.5
2,633,335	+				+1.4
2,633,335	+				+0.9
2,633,336	-				-1.2
2,633,344	+				-0.5
2,633,344	+				-0.2
2,633,344	+				-0.2
2,633,345	-				-0.5
2,633,345	-				-0.1
2,633,348	+				-0.2
2,633,348	+				+0.6
2,633,348	+				-0.7
2,633,349	-				-0.2
2,633,349	-				-0.0
2,633,349	-				+0.8
2,633,349	-				-1.4
2,633,395	+				+1.3
2,633,395	+				+0.2
2,633,395	+				+0.8
2,633,396	-				+0.2
2,633,396	-				+0.8
2,633,396	-				-2.0
2,633,396	-				-0.4
2,633,443	+				-1.0
2,633,443	+				-2.5
2,633,443	+				+0.4
2,633,448	+				+0.2
2,633,481	+				+0.2
2,633,482	-				+0.7
2,633,519	-				-0.3
2,633,519	-				+0.1
2,633,570	+		IAI47_12495	0.12	-0.6
2,633,587	+		IAI47_12495	0.14	+0.8
2,633,588	-		IAI47_12495	0.14	+1.0
2,633,588	-		IAI47_12495	0.14	-0.7
2,633,588	-		IAI47_12495	0.14	-0.8
2,633,588	-		IAI47_12495	0.14	-0.5
2,633,588	-		IAI47_12495	0.14	-0.0
2,633,643	-		IAI47_12495	0.18	+1.2
2,633,643	-		IAI47_12495	0.18	+0.1
2,633,693	+		IAI47_12495	0.21	-0.7
2,633,693	+		IAI47_12495	0.21	+0.3
2,633,698	+		IAI47_12495	0.22	-1.5
2,633,699	-		IAI47_12495	0.22	+2.6
2,633,699	-		IAI47_12495	0.22	-0.7
2,633,712	-		IAI47_12495	0.23	+0.0
2,633,712	-		IAI47_12495	0.23	+0.1
2,633,765	+		IAI47_12495	0.26	-0.6
2,633,821	-		IAI47_12495	0.30	-0.8
2,633,893	+		IAI47_12495	0.36	-0.5
2,633,893	+		IAI47_12495	0.36	-0.6
2,633,893	+		IAI47_12495	0.36	+0.4
2,633,951	+		IAI47_12495	0.40	+2.4
2,633,951	+		IAI47_12495	0.40	-1.7
2,634,118	+		IAI47_12495	0.52	+0.5
2,634,119	-		IAI47_12495	0.52	-1.8
2,634,119	-		IAI47_12495	0.52	+0.8
2,634,126	+		IAI47_12495	0.52	+0.4
2,634,136	+		IAI47_12495	0.53	+0.2
2,634,136	+		IAI47_12495	0.53	-0.1
2,634,136	+		IAI47_12495	0.53	-1.0
2,634,170	+		IAI47_12495	0.55	-0.4
2,634,170	+		IAI47_12495	0.55	-0.3
2,634,170	+		IAI47_12495	0.55	+2.4
2,634,170	+		IAI47_12495	0.55	-0.2
2,634,170	+		IAI47_12495	0.55	+2.1
2,634,170	+		IAI47_12495	0.55	+0.6
2,634,170	+		IAI47_12495	0.55	+0.8
2,634,171	-		IAI47_12495	0.56	-0.3
2,634,171	-		IAI47_12495	0.56	+1.1
2,634,193	+		IAI47_12495	0.57	-1.1
2,634,284	-		IAI47_12495	0.64	-0.3
2,634,284	-		IAI47_12495	0.64	-1.2
2,634,284	-		IAI47_12495	0.64	-1.1
2,634,335	-		IAI47_12495	0.67	-0.5
2,634,335	-		IAI47_12495	0.67	-0.1
2,634,335	-		IAI47_12495	0.67	-0.5
2,634,352	+		IAI47_12495	0.69	+0.5
2,634,359	+		IAI47_12495	0.69	+0.1
2,634,360	-		IAI47_12495	0.69	-1.5
2,634,424	+		IAI47_12495	0.74	-1.1
2,634,479	+		IAI47_12495	0.78	+0.3
2,634,479	+		IAI47_12495	0.78	-0.7
2,634,479	+		IAI47_12495	0.78	+0.8
2,634,479	+		IAI47_12495	0.78	+0.1
2,634,508	+		IAI47_12495	0.80	-0.6
2,634,508	+		IAI47_12495	0.80	+0.2
2,634,508	+		IAI47_12495	0.80	+0.8
2,634,508	+		IAI47_12495	0.80	+0.5
2,634,508	+		IAI47_12495	0.80	+2.1
2,634,509	-		IAI47_12495	0.80	-1.4
2,634,541	+		IAI47_12495	0.82	-1.1
2,634,541	+		IAI47_12495	0.82	+0.1
2,634,541	+		IAI47_12495	0.82	+1.6
2,634,541	+		IAI47_12495	0.82	-0.5
2,634,541	+		IAI47_12495	0.82	-1.5
2,634,541	+		IAI47_12495	0.82	-1.0
2,634,542	-		IAI47_12495	0.82	+1.8
2,634,542	-		IAI47_12495	0.82	+0.0
2,634,542	-		IAI47_12495	0.82	-0.5
2,634,542	-		IAI47_12495	0.82	-0.1
2,634,542	-		IAI47_12495	0.82	-0.5
2,634,542	-		IAI47_12495	0.82	-2.4
2,634,542	-		IAI47_12495	0.82	-2.8
2,634,572	+		IAI47_12495	0.84	+2.2
2,634,582	-		IAI47_12495	0.85	+0.5
2,634,622	+		IAI47_12495	0.88	+0.7
2,634,623	-		IAI47_12495	0.88	-0.1
2,634,623	-		IAI47_12495	0.88	+0.4
2,634,623	-		IAI47_12495	0.88	+0.2
2,634,697	-				+1.1
2,634,706	+				+0.0
2,634,706	+				-0.0
2,634,706	+				+0.2
2,634,706	+				+0.7
2,634,707	-				-1.4
2,634,707	-				-1.1
2,634,707	-				-0.1
2,634,727	+				-0.1
2,634,772	+				+0.4
2,634,795	+				-0.4
2,634,796	-				-0.2
2,634,872	-				+1.0
2,634,887	+				-0.5
2,634,892	+				-0.4
2,634,892	+				+0.6
2,634,893	-				-1.8
2,634,893	-				-0.3
2,634,893	-				+0.6
2,634,948	+		IAI47_12500	0.12	+0.4
2,634,948	+		IAI47_12500	0.12	-0.1
2,634,948	+		IAI47_12500	0.12	+0.9
2,634,948	+		IAI47_12500	0.12	-0.3
2,634,948	+		IAI47_12500	0.12	-0.5
2,634,948	+		IAI47_12500	0.12	+0.4
2,634,948	+		IAI47_12500	0.12	-0.7
2,634,948	+		IAI47_12500	0.12	+0.3
2,634,948	+		IAI47_12500	0.12	-0.9
2,634,948	+		IAI47_12500	0.12	+0.4
2,634,948	+		IAI47_12500	0.12	-0.5
2,634,948	+		IAI47_12500	0.12	-1.0
2,634,948	+		IAI47_12500	0.12	-0.4
2,634,948	+		IAI47_12500	0.12	+0.1
2,634,948	+		IAI47_12500	0.12	+0.1
2,634,949	-		IAI47_12500	0.12	-1.4
2,634,949	-		IAI47_12500	0.12	-1.2
2,634,949	-		IAI47_12500	0.12	-0.2
2,634,949	-		IAI47_12500	0.12	-1.7
2,634,949	-		IAI47_12500	0.12	-1.2
2,634,949	-		IAI47_12500	0.12	-0.1
2,634,949	-		IAI47_12500	0.12	-0.3
2,634,949	-		IAI47_12500	0.12	-1.2
2,634,949	-		IAI47_12500	0.12	+0.1
2,634,949	-		IAI47_12500	0.12	+0.1
2,634,949	-		IAI47_12500	0.12	+1.2
2,634,949	-		IAI47_12500	0.12	-1.5
2,634,949	-		IAI47_12500	0.12	+0.4
2,634,949	-		IAI47_12500	0.12	-0.2
2,634,950	+		IAI47_12500	0.12	-0.2
2,634,950	+		IAI47_12500	0.12	-0.5
2,634,950	+		IAI47_12500	0.12	-0.7
2,634,950	+		IAI47_12500	0.12	-0.2
2,634,950	+		IAI47_12500	0.12	-0.0
2,634,950	+		IAI47_12500	0.12	+0.8
2,634,950	+		IAI47_12500	0.12	-0.5
2,634,950	+		IAI47_12500	0.12	+0.2
2,634,950	+		IAI47_12500	0.12	+0.3
2,634,950	+		IAI47_12500	0.12	-0.1
2,634,950	+		IAI47_12500	0.12	+1.0
2,634,950	+		IAI47_12500	0.12	-0.4
2,634,951	-		IAI47_12500	0.12	-0.2
2,634,951	-		IAI47_12500	0.12	+0.6
2,634,951	-		IAI47_12500	0.12	-0.4
2,634,951	-		IAI47_12500	0.12	-0.5
2,634,951	-		IAI47_12500	0.12	-1.1
2,634,951	-		IAI47_12500	0.12	-1.2
2,634,951	-		IAI47_12500	0.12	-0.5
2,634,951	-		IAI47_12500	0.12	+1.1
2,634,951	-		IAI47_12500	0.12	-0.5
2,634,951	-		IAI47_12500	0.12	+0.4
2,634,954	+		IAI47_12500	0.12	+0.8
2,634,955	-		IAI47_12500	0.12	+0.3
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