Strain Fitness in Pantoea sp. MT58 around IAI47_00665

Experiment: Ying_AminoAcid20 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 2
142,267	+		IAI47_00660	0.18	+0.2
142,267	+		IAI47_00660	0.18	-0.4
142,267	+		IAI47_00660	0.18	+0.6
142,267	+		IAI47_00660	0.18	-0.3
142,268	-		IAI47_00660	0.18	-0.9
142,268	-		IAI47_00660	0.18	+0.1
142,322	-		IAI47_00660	0.23	-2.0
142,322	-		IAI47_00660	0.23	+0.3
142,418	-		IAI47_00660	0.32	-0.2
142,418	-		IAI47_00660	0.32	+0.2
142,445	-		IAI47_00660	0.34	-0.2
142,459	+		IAI47_00660	0.36	+1.4
142,459	+		IAI47_00660	0.36	-1.8
142,459	+		IAI47_00660	0.36	-2.2
142,459	+		IAI47_00660	0.36	+0.8
142,460	-		IAI47_00660	0.36	-0.2
142,460	-		IAI47_00660	0.36	+0.7
142,460	-		IAI47_00660	0.36	+0.8
142,531	+		IAI47_00660	0.42	-2.5
142,532	-		IAI47_00660	0.42	-0.8
142,532	-		IAI47_00660	0.42	+0.3
142,532	-		IAI47_00660	0.42	-0.5
142,532	-		IAI47_00660	0.42	+0.3
142,532	-		IAI47_00660	0.42	-0.8
142,532	-		IAI47_00660	0.42	-0.2
142,532	-		IAI47_00660	0.42	-0.3
142,564	+		IAI47_00660	0.45	+0.1
142,565	-		IAI47_00660	0.45	-0.6
142,565	-		IAI47_00660	0.45	-0.8
142,565	-		IAI47_00660	0.45	-0.8
142,565	-		IAI47_00660	0.45	-0.2
142,565	-		IAI47_00660	0.45	-1.2
142,565	-		IAI47_00660	0.45	-0.5
142,565	-		IAI47_00660	0.45	+0.4
142,565	-		IAI47_00660	0.45	+0.2
142,566	+		IAI47_00660	0.45	-0.4
142,566	+		IAI47_00660	0.45	-0.3
142,567	-		IAI47_00660	0.46	+0.8
142,567	-		IAI47_00660	0.46	+0.5
142,567	-		IAI47_00660	0.46	+0.2
142,567	-		IAI47_00660	0.46	-0.2
142,567	-		IAI47_00660	0.46	-1.6
142,567	-		IAI47_00660	0.46	-0.5
142,567	-		IAI47_00660	0.46	-0.2
142,567	-		IAI47_00660	0.46	-0.6
142,567	-		IAI47_00660	0.46	+0.8
142,567	-		IAI47_00660	0.46	-1.4
142,567	-		IAI47_00660	0.46	-0.2
142,567	-		IAI47_00660	0.46	+0.8
142,567	-		IAI47_00660	0.46	+0.8
142,567	-		IAI47_00660	0.46	+0.7
142,629	+		IAI47_00660	0.51	-0.2
142,629	+		IAI47_00660	0.51	-0.8
142,629	+		IAI47_00660	0.51	+3.4
142,630	-		IAI47_00660	0.51	+0.8
142,630	-		IAI47_00660	0.51	-0.7
142,652	-		IAI47_00660	0.53	-1.1
142,661	-		IAI47_00660	0.54	-0.0
142,661	-		IAI47_00660	0.54	+0.8
142,687	+		IAI47_00660	0.57	-0.2
142,687	+		IAI47_00660	0.57	-0.2
142,687	+		IAI47_00660	0.57	+1.8
142,687	+		IAI47_00660	0.57	+0.8
142,687	+		IAI47_00660	0.57	-0.8
142,687	+		IAI47_00660	0.57	-2.9
142,688	-		IAI47_00660	0.57	-0.4
142,688	-		IAI47_00660	0.57	-0.4
142,688	-		IAI47_00660	0.57	-2.5
142,688	-		IAI47_00660	0.57	-0.2
142,688	-		IAI47_00660	0.57	-0.2
142,688	-		IAI47_00660	0.57	+0.8
142,688	-		IAI47_00660	0.57	+0.4
142,688	-		IAI47_00660	0.57	-0.4
142,688	-		IAI47_00660	0.57	+0.8
142,688	-		IAI47_00660	0.57	+0.0
142,688	-		IAI47_00660	0.57	-0.2
142,703	-		IAI47_00660	0.58	-0.1
142,703	-		IAI47_00660	0.58	+1.3
142,720	+		IAI47_00660	0.60	+2.4
142,721	-		IAI47_00660	0.60	-0.8
142,721	-		IAI47_00660	0.60	-0.3
142,721	-		IAI47_00660	0.60	-0.6
142,721	-		IAI47_00660	0.60	-0.8
142,721	-		IAI47_00660	0.60	-1.6
142,721	-		IAI47_00660	0.60	+0.0
142,721	-		IAI47_00660	0.60	-0.7
142,721	-		IAI47_00660	0.60	-1.3
142,721	-		IAI47_00660	0.60	-0.2
142,721	-		IAI47_00660	0.60	+1.4
142,721	-		IAI47_00660	0.60	+0.6
142,721	-		IAI47_00660	0.60	-1.0
142,721	-		IAI47_00660	0.60	-0.0
142,741	+		IAI47_00660	0.62	-0.8
142,742	-		IAI47_00660	0.62	+1.4
142,779	+		IAI47_00660	0.65	+0.5
142,854	-		IAI47_00660	0.72	+1.1
142,854	-		IAI47_00660	0.72	-0.1
142,866	+		IAI47_00660	0.73	-0.9
142,867	-		IAI47_00660	0.73	+0.0
142,867	-		IAI47_00660	0.73	-0.0
142,867	-		IAI47_00660	0.73	+0.3
142,867	-		IAI47_00660	0.73	-1.0
142,867	-		IAI47_00660	0.73	+0.7
142,893	-		IAI47_00660	0.76	-0.2
142,916	-		IAI47_00660	0.78	-1.5
143,005	+		IAI47_00660	0.86	-0.8
143,005	+		IAI47_00660	0.86	+0.8
143,006	-		IAI47_00660	0.86	+0.8
143,007	+		IAI47_00660	0.86	+2.6
143,007	+		IAI47_00660	0.86	+1.2
143,008	-		IAI47_00660	0.87	+0.2
143,101	+				-0.6
143,102	-				+1.1
143,108	+				+0.3
143,109	-				+0.8
143,109	-				-0.8
143,109	-				-1.5
143,111	+				+1.8
143,111	+				+0.1
143,111	+				+0.8
143,112	-				-2.5
143,112	-				-0.3
143,112	-				-0.5
143,112	-				-0.9
143,114	-				-1.0
143,114	-				+0.2
143,114	-				+0.6
143,152	+				-0.5
143,153	-				-0.0
143,153	-				-0.3
143,187	+				-1.2
143,188	-				+1.8
143,188	-				-0.2
143,227	+				-0.8
143,227	+				-0.5
143,228	-				-1.2
143,231	+				-0.2
143,231	+				-1.5
143,231	+				-0.9
143,231	+				-0.2
143,231	+				+1.1
143,231	+				+1.8
143,231	+				-0.3
143,232	-				-0.9
143,232	-				+0.1
143,235	-				+0.1
143,245	+				+0.5
143,246	-				-0.6
143,262	+				-0.1
143,262	+				+1.2
143,262	+				+0.4
143,275	+				-0.2
143,275	+				-1.2
143,276	-				+0.8
143,276	-				-1.4
143,276	-				+2.1
143,276	-				-0.2
143,285	+				+0.7
143,286	-				+0.3
143,286	-				-1.6
143,300	+				+0.3
143,300	+				+2.4
143,301	-				-1.2
143,301	-				-0.5
143,304	+				-1.0
143,304	+				+0.1
143,304	+				+0.7
143,304	+				-1.4
143,304	+				+0.6
143,304	+				-0.7
143,305	-				+2.4
143,305	-				+0.3
143,305	-				+0.3
143,305	-				-0.5
143,305	-				+0.8
143,305	-				+0.0
143,422	+		IAI47_00665	0.19	+0.8
143,422	+		IAI47_00665	0.19	+0.1
143,437	+		IAI47_00665	0.20	-0.6
143,437	+		IAI47_00665	0.20	-0.6
143,438	-		IAI47_00665	0.20	-2.2
143,438	-		IAI47_00665	0.20	-2.2
143,438	-		IAI47_00665	0.20	+0.8
143,468	+		IAI47_00665	0.23	+2.2
143,468	+		IAI47_00665	0.23	-0.1
143,469	-		IAI47_00665	0.23	-0.6
143,469	-		IAI47_00665	0.23	+0.2
143,469	-		IAI47_00665	0.23	+0.2
143,500	+		IAI47_00665	0.26	-0.1
143,500	+		IAI47_00665	0.26	-0.1
143,500	+		IAI47_00665	0.26	-0.2
143,501	-		IAI47_00665	0.26	+0.1
143,501	-		IAI47_00665	0.26	+0.6
143,501	-		IAI47_00665	0.26	-0.6
143,512	+		IAI47_00665	0.27	-1.0
143,513	-		IAI47_00665	0.27	-1.0
143,567	+		IAI47_00665	0.33	-1.0
143,567	+		IAI47_00665	0.33	-1.3
143,567	+		IAI47_00665	0.33	+0.0
143,567	+		IAI47_00665	0.33	+0.4
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	-1.0
143,567	+		IAI47_00665	0.33	-1.3
143,567	+		IAI47_00665	0.33	-2.6
143,567	+		IAI47_00665	0.33	-0.8
143,567	+		IAI47_00665	0.33	+0.1
143,567	+		IAI47_00665	0.33	-0.0
143,567	+		IAI47_00665	0.33	+0.1
143,567	+		IAI47_00665	0.33	-0.3
143,567	+		IAI47_00665	0.33	-0.8
143,567	+		IAI47_00665	0.33	+0.2
143,567	+		IAI47_00665	0.33	-0.0
143,567	+		IAI47_00665	0.33	-0.9
143,567	+		IAI47_00665	0.33	-0.2
143,567	+		IAI47_00665	0.33	+0.8
143,568	-		IAI47_00665	0.33	+0.1
143,568	-		IAI47_00665	0.33	-2.6
143,568	-		IAI47_00665	0.33	-0.5
143,568	-		IAI47_00665	0.33	-1.5
143,568	-		IAI47_00665	0.33	-2.4
143,568	-		IAI47_00665	0.33	-0.2
143,568	-		IAI47_00665	0.33	-2.2
143,568	-		IAI47_00665	0.33	+0.0
143,568	-		IAI47_00665	0.33	+0.8
143,568	-		IAI47_00665	0.33	-0.8
143,568	-		IAI47_00665	0.33	-0.1
143,568	-		IAI47_00665	0.33	+0.9
143,568	-		IAI47_00665	0.33	-0.8
143,568	-		IAI47_00665	0.33	+0.1
143,568	-		IAI47_00665	0.33	+0.4
143,568	-		IAI47_00665	0.33	+1.0
143,568	-		IAI47_00665	0.33	-1.9
143,569	+		IAI47_00665	0.33	-0.8
143,569	+		IAI47_00665	0.33	-0.5
143,569	+		IAI47_00665	0.33	-0.7
143,569	+		IAI47_00665	0.33	+0.1
143,569	+		IAI47_00665	0.33	-2.3
143,569	+		IAI47_00665	0.33	+0.5
143,569	+		IAI47_00665	0.33	+0.6
143,569	+		IAI47_00665	0.33	-0.2
143,569	+		IAI47_00665	0.33	-0.6
143,569	+		IAI47_00665	0.33	-0.1
143,569	+		IAI47_00665	0.33	-0.6
143,569	+		IAI47_00665	0.33	-0.8
143,569	+		IAI47_00665	0.33	-0.3
143,569	+		IAI47_00665	0.33	-0.8
143,569	+		IAI47_00665	0.33	-0.0
143,569	+		IAI47_00665	0.33	-0.2
143,569	+		IAI47_00665	0.33	+1.2
143,569	+		IAI47_00665	0.33	-0.3
143,570	-		IAI47_00665	0.33	+0.1
143,570	-		IAI47_00665	0.33	+0.3
143,570	-		IAI47_00665	0.33	-0.4
143,570	-		IAI47_00665	0.33	+0.6
143,570	-		IAI47_00665	0.33	+0.2
143,570	-		IAI47_00665	0.33	+0.6
143,570	-		IAI47_00665	0.33	+0.2
143,570	-		IAI47_00665	0.33	-0.1
143,570	-		IAI47_00665	0.33	-0.3
143,570	-		IAI47_00665	0.33	-0.2
143,570	-		IAI47_00665	0.33	+0.0
143,570	-		IAI47_00665	0.33	-0.6
143,570	-		IAI47_00665	0.33	+0.3
143,572	+		IAI47_00665	0.33	+1.8
143,572	+		IAI47_00665	0.33	+1.0
143,573	-		IAI47_00665	0.33	+0.2
143,573	-		IAI47_00665	0.33	-0.8
143,573	-		IAI47_00665	0.33	-1.0
143,573	-		IAI47_00665	0.33	+0.1
143,573	-		IAI47_00665	0.33	-2.2
143,573	-		IAI47_00665	0.33	+0.8
143,578	+		IAI47_00665	0.34	-1.9
143,578	+		IAI47_00665	0.34	-1.0
143,578	+		IAI47_00665	0.34	-0.2
143,578	+		IAI47_00665	0.34	+1.5
143,579	-		IAI47_00665	0.34	-0.6
143,583	+		IAI47_00665	0.34	+0.2
143,583	+		IAI47_00665	0.34	+0.5
143,584	-		IAI47_00665	0.34	-1.3
143,584	-		IAI47_00665	0.34	-1.2
143,584	-		IAI47_00665	0.34	-1.4
143,584	-		IAI47_00665	0.34	-1.5
143,584	-		IAI47_00665	0.34	+0.6
143,594	+		IAI47_00665	0.35	+0.8
143,621	+		IAI47_00665	0.38	-0.5
143,621	+		IAI47_00665	0.38	+0.2
143,621	+		IAI47_00665	0.38	+0.2
143,621	+		IAI47_00665	0.38	-0.7
143,621	+		IAI47_00665	0.38	-0.8
143,621	+		IAI47_00665	0.38	+1.6
143,622	-		IAI47_00665	0.38	-0.5
143,622	-		IAI47_00665	0.38	+0.8
143,642	+		IAI47_00665	0.40	+1.3
143,642	+		IAI47_00665	0.40	-1.5
143,643	-		IAI47_00665	0.40	-0.6
143,704	+		IAI47_00665	0.46	+0.5
143,729	+		IAI47_00665	0.48	-1.0
143,729	+		IAI47_00665	0.48	+1.4
143,729	+		IAI47_00665	0.48	-1.1
143,729	+		IAI47_00665	0.48	+0.5
143,729	+		IAI47_00665	0.48	-1.6
143,729	+		IAI47_00665	0.48	-0.9
143,729	+		IAI47_00665	0.48	-0.3
143,729	+		IAI47_00665	0.48	-1.5
143,729	+		IAI47_00665	0.48	+1.5
143,729	+		IAI47_00665	0.48	+0.3
143,729	+		IAI47_00665	0.48	-0.2
143,729	+		IAI47_00665	0.48	+0.0
143,729	+		IAI47_00665	0.48	+2.6
143,729	+		IAI47_00665	0.48	-0.8
143,729	+		IAI47_00665	0.48	+1.8
143,729	+		IAI47_00665	0.48	+0.0
143,730	-		IAI47_00665	0.48	+0.1
143,730	-		IAI47_00665	0.48	-0.8
143,730	-		IAI47_00665	0.48	-0.9
143,730	-		IAI47_00665	0.48	-2.9
143,730	-		IAI47_00665	0.48	+0.6
143,730	-		IAI47_00665	0.48	-0.8
143,730	-		IAI47_00665	0.48	-0.4
143,730	-		IAI47_00665	0.48	-0.5
143,730	-		IAI47_00665	0.48	-2.0
143,730	-		IAI47_00665	0.48	-0.6
143,730	-		IAI47_00665	0.48	-0.5
143,730	-		IAI47_00665	0.48	-1.5
143,731	+		IAI47_00665	0.48	-0.2
143,731	+		IAI47_00665	0.48	+0.6
143,731	+		IAI47_00665	0.48	-0.5
143,732	-		IAI47_00665	0.48	+0.0
143,732	-		IAI47_00665	0.48	+0.8
143,732	-		IAI47_00665	0.48	+0.5
143,732	-		IAI47_00665	0.48	-3.2
143,732	-		IAI47_00665	0.48	+0.8
143,732	-		IAI47_00665	0.48	-0.8
143,732	-		IAI47_00665	0.48	+0.8
143,821	-		IAI47_00665	0.57	+3.4
143,831	+		IAI47_00665	0.58	-1.2
143,831	+		IAI47_00665	0.58	+0.8
143,831	+		IAI47_00665	0.58	-0.0
143,832	-		IAI47_00665	0.58	-0.7
143,908	+		IAI47_00665	0.65	+1.8
143,908	+		IAI47_00665	0.65	+0.8
143,908	+		IAI47_00665	0.65	+0.3
143,908	+		IAI47_00665	0.65	-0.6
143,908	+		IAI47_00665	0.65	-0.8
143,908	+		IAI47_00665	0.65	+0.5
143,908	+		IAI47_00665	0.65	+0.1
143,908	+		IAI47_00665	0.65	-0.6
143,908	+		IAI47_00665	0.65	+1.6
143,908	+		IAI47_00665	0.65	-0.8
143,908	+		IAI47_00665	0.65	-0.6
143,909	-		IAI47_00665	0.65	-0.4
143,909	-		IAI47_00665	0.65	-0.1
143,909	-		IAI47_00665	0.65	-1.6
143,909	-		IAI47_00665	0.65	-0.3
143,909	-		IAI47_00665	0.65	+1.0
143,909	-		IAI47_00665	0.65	+0.8
143,909	-		IAI47_00665	0.65	-0.5
143,909	-		IAI47_00665	0.65	+0.4
143,909	-		IAI47_00665	0.65	+0.8
143,909	-		IAI47_00665	0.65	+0.5
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