Strain Fitness in Pantoea sp. MT58 around IAI47_18830

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
4,012,745	+		IAI47_18825	0.12	-0.4
4,012,746	-		IAI47_18825	0.12	-3.1
4,012,775	+		IAI47_18825	0.17	-1.6
4,012,776	-		IAI47_18825	0.17	+0.6
4,012,776	-		IAI47_18825	0.17	-2.1
4,012,776	-		IAI47_18825	0.17	+1.0
4,012,875	-		IAI47_18825	0.34	-1.0
4,012,935	+		IAI47_18825	0.44	+0.8
4,012,944	+		IAI47_18825	0.46	+1.3
4,012,985	+		IAI47_18825	0.52	+0.2
4,012,985	+		IAI47_18825	0.52	+0.6
4,012,986	-		IAI47_18825	0.53	-1.8
4,012,986	-		IAI47_18825	0.53	+0.6
4,013,008	+		IAI47_18825	0.56	-2.0
4,013,008	+		IAI47_18825	0.56	+2.2
4,013,009	-		IAI47_18825	0.57	+2.2
4,013,009	-		IAI47_18825	0.57	+0.8
4,013,095	+		IAI47_18825	0.71	+0.1
4,013,156	+		IAI47_18825	0.81	-1.0
4,013,156	+		IAI47_18825	0.81	-0.2
4,013,156	+		IAI47_18825	0.81	-0.5
4,013,156	+		IAI47_18825	0.81	-0.6
4,013,157	-		IAI47_18825	0.82	+1.9
4,013,157	-		IAI47_18825	0.82	+1.1
4,013,157	-		IAI47_18825	0.82	-0.7
4,013,157	-		IAI47_18825	0.82	+1.8
4,013,190	+		IAI47_18825	0.87	+1.8
4,013,190	+		IAI47_18825	0.87	-1.6
4,013,191	-		IAI47_18825	0.87	+0.2
4,013,191	-		IAI47_18825	0.87	+1.6
4,013,191	-		IAI47_18825	0.87	-0.4
4,013,191	-		IAI47_18825	0.87	-1.9
4,013,191	-		IAI47_18825	0.87	+0.4
4,013,191	-		IAI47_18825	0.87	+2.0
4,013,201	+		IAI47_18825	0.89	+1.6
4,013,201	+		IAI47_18825	0.89	+0.3
4,013,223	+				+1.1
4,013,224	-				-1.6
4,013,224	-				-1.2
4,013,224	-				+0.1
4,013,259	+				-1.1
4,013,259	+				+0.7
4,013,259	+				-0.0
4,013,259	+				+1.2
4,013,259	+				-0.6
4,013,260	-				+1.2
4,013,260	-				+1.0
4,013,267	+				+0.2
4,013,267	+				+0.1
4,013,267	+				+0.6
4,013,267	+				+1.7
4,013,267	+				+0.6
4,013,267	+				+0.8
4,013,267	+				+1.6
4,013,267	+				-0.0
4,013,267	+				-0.0
4,013,268	-				+1.0
4,013,268	-				+1.0
4,013,268	-				+0.1
4,013,268	-				+1.6
4,013,279	+				-0.9
4,013,374	+				-1.2
4,013,375	-				+0.6
4,013,375	-				-2.0
4,013,375	-				+0.3
4,013,375	-				+0.2
4,013,405	-				-0.4
4,013,406	+				-0.8
4,013,406	+				+0.2
4,013,406	+				-0.7
4,013,406	+				-0.0
4,013,406	+				-1.6
4,013,406	+				-1.2
4,013,432	+				-0.4
4,013,433	-				+0.7
4,013,437	+				+0.2
4,013,437	+				+0.2
4,013,437	+				+1.6
4,013,438	-				-0.0
4,013,438	-				-1.0
4,013,438	-				+1.0
4,013,467	+				-1.1
4,013,467	+				-1.9
4,013,467	+				-0.2
4,013,478	-				+0.9
4,013,509	+				+2.9
4,013,532	+				+1.8
4,013,533	-				-0.8
4,013,533	-				+1.1
4,013,533	-				-1.8
4,013,533	-				-2.4
4,013,533	-				-0.4
4,013,533	-				+0.8
4,013,533	-				-2.9
4,013,533	-				-0.8
4,014,122	-		IAI47_18830	0.43	-2.0
4,014,122	-		IAI47_18830	0.43	-2.1
4,014,910	+				-1.8
4,014,948	+				-0.0
4,014,949	-				+1.0
4,014,949	-				-1.8
4,014,949	-				-1.0
4,014,949	-				+2.8
4,014,953	+				+1.1
4,014,953	+				-1.6
4,014,953	+				+0.3
4,014,953	+				+0.1
4,014,953	+				+2.1
4,014,953	+				+2.0
4,014,953	+				+0.6
4,014,954	-				+0.7
4,014,954	-				+1.6
4,014,954	-				+1.3
4,014,954	-				-0.4
4,014,954	-				+0.3
4,014,954	-				-1.0
4,014,954	-				-1.4
4,014,957	+				+1.2
4,014,957	+				-2.3
4,014,958	-				-0.4
4,014,958	-				-1.9
4,014,990	-				+2.6
4,014,990	-				-1.5
4,014,990	-				+0.4
4,015,012	-				+1.2