Strain Fitness in Pantoea sp. MT58 around IAI47_16705

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
3,532,524	-		IAI47_16700	0.24	-1.6
3,532,524	-		IAI47_16700	0.24	-0.7
3,532,532	-		IAI47_16700	0.24	-2.5
3,532,733	+		IAI47_16700	0.40	+0.0
3,532,756	+		IAI47_16700	0.42	-2.4
3,532,756	+		IAI47_16700	0.42	+1.4
3,532,757	-		IAI47_16700	0.42	+0.5
3,532,757	-		IAI47_16700	0.42	-2.6
3,532,844	+		IAI47_16700	0.49	-1.0
3,532,844	+		IAI47_16700	0.49	-1.4
3,532,844	+		IAI47_16700	0.49	-0.3
3,532,845	-		IAI47_16700	0.49	+0.6
3,532,845	-		IAI47_16700	0.49	+0.4
3,532,845	-		IAI47_16700	0.49	+1.9
3,532,845	-		IAI47_16700	0.49	+1.6
3,532,896	-		IAI47_16700	0.53	-1.5
3,532,933	+		IAI47_16700	0.56	+0.6
3,532,933	+		IAI47_16700	0.56	+0.4
3,532,933	+		IAI47_16700	0.56	+1.0
3,532,933	+		IAI47_16700	0.56	-0.2
3,532,933	+		IAI47_16700	0.56	+0.6
3,532,933	+		IAI47_16700	0.56	+1.9
3,532,934	-		IAI47_16700	0.56	+0.8
3,532,934	-		IAI47_16700	0.56	+2.5
3,532,934	-		IAI47_16700	0.56	-2.6
3,532,934	-		IAI47_16700	0.56	+0.9
3,532,934	-		IAI47_16700	0.56	+1.6
3,532,934	-		IAI47_16700	0.56	-2.6
3,532,934	-		IAI47_16700	0.56	-0.0
3,532,934	-		IAI47_16700	0.56	-0.1
3,532,934	-		IAI47_16700	0.56	+1.6
3,532,985	+		IAI47_16700	0.60	-0.4
3,532,986	-		IAI47_16700	0.60	+0.8
3,533,098	+		IAI47_16700	0.69	+1.9
3,533,098	+		IAI47_16700	0.69	-1.0
3,533,098	+		IAI47_16700	0.69	-0.2
3,533,099	-		IAI47_16700	0.69	+1.3
3,533,099	-		IAI47_16700	0.69	-1.4
3,533,099	-		IAI47_16700	0.69	-0.8
3,533,099	-		IAI47_16700	0.69	-1.2
3,533,099	-		IAI47_16700	0.69	+0.5
3,533,104	+		IAI47_16700	0.70	+1.7
3,533,140	+		IAI47_16700	0.73	+1.7
3,533,141	-		IAI47_16700	0.73	-2.4
3,533,141	-		IAI47_16700	0.73	-0.4
3,533,185	-		IAI47_16700	0.76	+0.3
3,533,227	+		IAI47_16700	0.79	+0.7
3,533,227	+		IAI47_16700	0.79	+0.5
3,533,227	+		IAI47_16700	0.79	+1.3
3,533,227	+		IAI47_16700	0.79	-1.0
3,533,227	+		IAI47_16700	0.79	+0.4
3,533,227	+		IAI47_16700	0.79	-0.2
3,533,227	+		IAI47_16700	0.79	-1.3
3,533,228	-		IAI47_16700	0.79	-0.6
3,533,228	-		IAI47_16700	0.79	+0.8
3,533,228	-		IAI47_16700	0.79	-1.2
3,533,228	-		IAI47_16700	0.79	-0.8
3,533,314	+		IAI47_16700	0.86	-0.4
3,533,371	+				+0.0
3,533,371	+				-0.6
3,533,371	+				-0.2
3,533,372	-				+0.0
3,533,372	-				+1.6
3,533,372	-				+0.0
3,533,372	-				+0.5
3,533,384	+				+1.6
3,533,385	-				-0.8
3,533,385	-				-0.3
3,533,385	-				-0.7
3,533,385	-				-0.6
3,533,385	-				+0.0
3,533,460	-				-2.6
3,533,481	-				+0.9
3,533,481	-				+3.2
3,533,481	-				+1.0
3,533,492	+				+0.9
3,533,492	+				-1.0
3,533,492	+				+0.3
3,533,493	-				-1.6
3,533,493	-				+2.2
3,533,493	-				+0.5
3,533,493	-				+0.5
3,533,500	+				-0.7
3,533,501	-				-0.0
3,533,526	-				-0.1
3,533,526	-				-1.6
3,533,559	+				+1.2
3,533,559	+				+1.0
3,533,560	-				+1.0
3,533,560	-				-0.1
3,533,613	+				+0.6
3,533,634	+				-1.0
3,533,635	-				-0.9
3,533,657	+				+1.6
3,533,657	+				+0.0
3,533,657	+				+1.6
3,533,657	+				+3.1
3,533,657	+				+0.0
3,533,658	-				+1.3
3,533,658	-				-0.0
3,533,658	-				-0.2
3,533,658	-				+0.8
3,533,658	-				-0.6
3,533,686	-		IAI47_16705	0.11	-1.0
3,533,726	+		IAI47_16705	0.13	+2.6
3,533,726	+		IAI47_16705	0.13	+2.6
3,533,726	+		IAI47_16705	0.13	+0.8
3,533,726	+		IAI47_16705	0.13	+1.0
3,533,726	+		IAI47_16705	0.13	-1.1
3,533,726	+		IAI47_16705	0.13	-1.0
3,533,726	+		IAI47_16705	0.13	+1.6
3,533,726	+		IAI47_16705	0.13	+1.7
3,533,726	+		IAI47_16705	0.13	-1.6
3,533,726	+		IAI47_16705	0.13	+0.1
3,533,727	-		IAI47_16705	0.13	+0.9
3,533,727	-		IAI47_16705	0.13	+0.8
3,533,727	-		IAI47_16705	0.13	+2.9
3,533,727	-		IAI47_16705	0.13	-1.8
3,533,727	-		IAI47_16705	0.13	+0.6
3,533,727	-		IAI47_16705	0.13	-0.2
3,533,727	-		IAI47_16705	0.13	-1.8
3,533,727	-		IAI47_16705	0.13	+1.2
3,533,727	-		IAI47_16705	0.13	+0.9
3,533,727	-		IAI47_16705	0.13	-1.2
3,533,727	-		IAI47_16705	0.13	+0.6
3,533,727	-		IAI47_16705	0.13	-0.5
3,533,727	-		IAI47_16705	0.13	-0.4
3,533,727	-		IAI47_16705	0.13	+1.6
3,533,727	-		IAI47_16705	0.13	-1.1
3,533,727	-		IAI47_16705	0.13	-0.2
3,533,727	-		IAI47_16705	0.13	+0.4
3,533,730	+		IAI47_16705	0.14	+0.2
3,533,730	+		IAI47_16705	0.14	+0.6
3,533,731	-		IAI47_16705	0.14	+0.8
3,533,731	-		IAI47_16705	0.14	+0.2
3,533,731	-		IAI47_16705	0.14	+0.9
3,533,731	-		IAI47_16705	0.14	+0.0
3,533,769	+		IAI47_16705	0.16	+0.2
3,533,769	+		IAI47_16705	0.16	+2.0
3,533,769	+		IAI47_16705	0.16	+1.6
3,533,770	-		IAI47_16705	0.16	+0.2
3,533,770	-		IAI47_16705	0.16	-2.8
3,533,859	+		IAI47_16705	0.21	+1.2
3,533,859	+		IAI47_16705	0.21	+0.6
3,533,860	-		IAI47_16705	0.21	+0.8
3,533,901	-		IAI47_16705	0.23	+0.9
3,533,901	-		IAI47_16705	0.23	-1.7
3,533,921	+		IAI47_16705	0.24	-0.4
3,533,921	+		IAI47_16705	0.24	-2.6
3,533,921	+		IAI47_16705	0.24	+0.0
3,533,921	+		IAI47_16705	0.24	+0.6
3,533,921	+		IAI47_16705	0.24	+0.9
3,533,922	-		IAI47_16705	0.24	-1.0
3,533,922	-		IAI47_16705	0.24	-0.4
3,533,922	-		IAI47_16705	0.24	-1.2
3,533,922	-		IAI47_16705	0.24	-0.6
3,533,922	-		IAI47_16705	0.24	+1.2
3,533,922	-		IAI47_16705	0.24	-1.0
3,533,922	-		IAI47_16705	0.24	+0.0
3,533,925	+		IAI47_16705	0.25	-0.4
3,533,925	+		IAI47_16705	0.25	-3.2
3,533,926	-		IAI47_16705	0.25	+0.4
3,533,926	-		IAI47_16705	0.25	-1.6
3,533,926	-		IAI47_16705	0.25	-1.7
3,533,926	-		IAI47_16705	0.25	+1.3
3,533,926	-		IAI47_16705	0.25	-0.1
3,533,926	-		IAI47_16705	0.25	+1.6
3,533,926	-		IAI47_16705	0.25	-1.6
3,533,934	-		IAI47_16705	0.25	-0.3
3,533,978	+		IAI47_16705	0.28	-1.0
3,533,978	+		IAI47_16705	0.28	-2.8
3,533,978	+		IAI47_16705	0.28	+0.9
3,533,978	+		IAI47_16705	0.28	-2.2
3,533,979	-		IAI47_16705	0.28	+0.8
3,534,002	+		IAI47_16705	0.29	-0.8
3,534,002	+		IAI47_16705	0.29	-1.4
3,534,002	+		IAI47_16705	0.29	+1.2
3,534,002	+		IAI47_16705	0.29	-0.3
3,534,003	-		IAI47_16705	0.29	-1.4
3,534,003	-		IAI47_16705	0.29	+0.9
3,534,003	-		IAI47_16705	0.29	-1.0
3,534,003	-		IAI47_16705	0.29	+0.0
3,534,043	-		IAI47_16705	0.31	+1.2
3,534,043	-		IAI47_16705	0.31	+0.8
3,534,132	+		IAI47_16705	0.36	+0.4
3,534,132	+		IAI47_16705	0.36	+0.6
3,534,133	-		IAI47_16705	0.36	+0.2
3,534,133	-		IAI47_16705	0.36	-0.4
3,534,138	+		IAI47_16705	0.37	+1.9
3,534,139	-		IAI47_16705	0.37	-2.2
3,534,139	-		IAI47_16705	0.37	-1.6
3,534,139	-		IAI47_16705	0.37	-1.1
3,534,186	+		IAI47_16705	0.39	-0.7
3,534,231	-		IAI47_16705	0.42	+0.5
3,534,234	+		IAI47_16705	0.42	+0.2
3,534,234	+		IAI47_16705	0.42	-1.7
3,534,235	-		IAI47_16705	0.42	-1.6
3,534,241	+		IAI47_16705	0.42	+1.2
3,534,241	+		IAI47_16705	0.42	-1.2
3,534,269	+		IAI47_16705	0.44	+1.0
3,534,269	+		IAI47_16705	0.44	-2.6
3,534,269	+		IAI47_16705	0.44	-0.3
3,534,269	+		IAI47_16705	0.44	+1.3
3,534,270	-		IAI47_16705	0.44	-1.8
3,534,270	-		IAI47_16705	0.44	-0.6
3,534,270	-		IAI47_16705	0.44	-0.2
3,534,270	-		IAI47_16705	0.44	+0.4
3,534,312	-		IAI47_16705	0.46	+0.2
3,534,380	+		IAI47_16705	0.50	+0.0
3,534,380	+		IAI47_16705	0.50	+0.9
3,534,380	+		IAI47_16705	0.50	+1.6
3,534,380	+		IAI47_16705	0.50	+1.6
3,534,380	+		IAI47_16705	0.50	+0.5
3,534,380	+		IAI47_16705	0.50	-0.4
3,534,380	+		IAI47_16705	0.50	-1.0
3,534,381	-		IAI47_16705	0.50	+2.2
3,534,381	-		IAI47_16705	0.50	+0.6
3,534,406	-		IAI47_16705	0.52	-1.4
3,534,406	-		IAI47_16705	0.52	-0.5
3,534,406	-		IAI47_16705	0.52	-0.4
3,534,406	-		IAI47_16705	0.52	+0.8
3,534,449	+		IAI47_16705	0.54	-0.6
3,534,449	+		IAI47_16705	0.54	-0.3
3,534,449	+		IAI47_16705	0.54	+0.0
3,534,450	-		IAI47_16705	0.54	+0.1
3,534,450	-		IAI47_16705	0.54	-1.8
3,534,512	+		IAI47_16705	0.58	+0.7
3,534,512	+		IAI47_16705	0.58	-2.2
3,534,527	+		IAI47_16705	0.59	-1.0
3,534,527	+		IAI47_16705	0.59	+1.9
3,534,528	-		IAI47_16705	0.59	+0.0
3,534,531	+		IAI47_16705	0.59	-1.8
3,534,531	+		IAI47_16705	0.59	-0.6
3,534,531	+		IAI47_16705	0.59	+1.6
3,534,531	+		IAI47_16705	0.59	-0.7
3,534,531	+		IAI47_16705	0.59	-0.7
3,534,531	+		IAI47_16705	0.59	+0.2
3,534,531	+		IAI47_16705	0.59	-1.2
3,534,532	-		IAI47_16705	0.59	-1.2
3,534,532	-		IAI47_16705	0.59	+0.0
3,534,532	-		IAI47_16705	0.59	+0.7
3,534,532	-		IAI47_16705	0.59	-2.6
3,534,540	-		IAI47_16705	0.59	-0.3
3,534,540	-		IAI47_16705	0.59	+0.5
3,534,540	-		IAI47_16705	0.59	-1.2
3,534,548	+		IAI47_16705	0.60	+1.3
3,534,548	+		IAI47_16705	0.60	-0.4
3,534,548	+		IAI47_16705	0.60	+0.9
3,534,548	+		IAI47_16705	0.60	-0.7
3,534,549	-		IAI47_16705	0.60	+0.0
3,534,549	-		IAI47_16705	0.60	-0.7
3,534,661	+		IAI47_16705	0.66	+0.3
3,534,661	+		IAI47_16705	0.66	-1.2
3,534,661	+		IAI47_16705	0.66	+1.0
3,534,661	+		IAI47_16705	0.66	+0.2
3,534,661	+		IAI47_16705	0.66	-0.4
3,534,661	+		IAI47_16705	0.66	-0.6
3,534,661	+		IAI47_16705	0.66	+0.2
3,534,662	-		IAI47_16705	0.66	-0.7
3,534,662	-		IAI47_16705	0.66	+1.6
3,534,662	-		IAI47_16705	0.66	-0.4
3,534,662	-		IAI47_16705	0.66	+0.0
3,534,662	-		IAI47_16705	0.66	-0.1
3,534,662	-		IAI47_16705	0.66	-1.6
3,534,662	-		IAI47_16705	0.66	+0.2
3,534,662	-		IAI47_16705	0.66	-0.9
3,534,800	+		IAI47_16705	0.74	+0.4
3,534,800	+		IAI47_16705	0.74	-1.2
3,534,801	-		IAI47_16705	0.74	-1.2
3,534,803	+		IAI47_16705	0.74	+0.5
3,534,803	+		IAI47_16705	0.74	-0.6
3,534,804	-		IAI47_16705	0.74	-0.1
3,534,804	-		IAI47_16705	0.74	-1.6
3,534,806	+		IAI47_16705	0.74	-0.2
3,534,806	+		IAI47_16705	0.74	-2.5
3,534,806	+		IAI47_16705	0.74	-1.7
3,534,806	+		IAI47_16705	0.74	-1.4
3,534,806	+		IAI47_16705	0.74	+3.1
3,534,806	+		IAI47_16705	0.74	+2.2
3,534,807	-		IAI47_16705	0.74	+1.1
3,534,807	-		IAI47_16705	0.74	+1.0
3,534,807	-		IAI47_16705	0.74	-1.0
3,534,807	-		IAI47_16705	0.74	+1.3
3,534,807	-		IAI47_16705	0.74	+0.0
3,534,807	-		IAI47_16705	0.74	-1.2
3,534,852	+		IAI47_16705	0.77	-2.0
3,534,852	+		IAI47_16705	0.77	+2.0
3,534,852	+		IAI47_16705	0.77	+0.2
3,534,852	+		IAI47_16705	0.77	+1.8
3,534,852	+		IAI47_16705	0.77	+0.0
3,534,852	+		IAI47_16705	0.77	+0.5
3,534,853	-		IAI47_16705	0.77	+0.1
3,534,876	+		IAI47_16705	0.78	+1.6
3,534,877	-		IAI47_16705	0.78	+0.5
3,534,878	+		IAI47_16705	0.78	-0.2
3,534,878	+		IAI47_16705	0.78	-2.0
3,534,878	+		IAI47_16705	0.78	+0.8
3,534,878	+		IAI47_16705	0.78	+0.4
3,534,878	+		IAI47_16705	0.78	-0.4
3,534,878	+		IAI47_16705	0.78	-2.0
3,534,878	+		IAI47_16705	0.78	+0.2
3,534,878	+		IAI47_16705	0.78	+1.7
3,534,878	+		IAI47_16705	0.78	-1.0
3,534,879	-		IAI47_16705	0.78	+0.0
3,534,879	-		IAI47_16705	0.78	+0.6
3,534,879	-		IAI47_16705	0.78	-0.2
3,534,879	-		IAI47_16705	0.78	-1.4
3,534,893	+		IAI47_16705	0.79	-0.6
3,534,893	+		IAI47_16705	0.79	-1.4
3,534,893	+		IAI47_16705	0.79	+0.9
3,534,893	+		IAI47_16705	0.79	-1.8
3,534,893	+		IAI47_16705	0.79	-1.2
3,534,893	+		IAI47_16705	0.79	+0.7
3,534,893	+		IAI47_16705	0.79	-1.0
3,534,893	+		IAI47_16705	0.79	+1.2
3,534,893	+		IAI47_16705	0.79	-0.8
3,534,893	+		IAI47_16705	0.79	-1.4
3,534,893	+		IAI47_16705	0.79	+0.9
3,534,894	-		IAI47_16705	0.79	+1.9
3,534,894	-		IAI47_16705	0.79	+0.0
3,534,894	-		IAI47_16705	0.79	-0.1
3,534,894	-		IAI47_16705	0.79	+0.2
3,534,894	-		IAI47_16705	0.79	-1.6
3,534,894	-		IAI47_16705	0.79	-2.8
3,534,894	-		IAI47_16705	0.79	-1.8
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