Strain Fitness in Pantoea sp. MT58 around IAI47_12930

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
2,734,187	-		IAI47_12925	0.45	+1.4
2,734,201	+		IAI47_12925	0.46	+1.6
2,734,368	+		IAI47_12925	0.55	-1.5
2,734,368	+		IAI47_12925	0.55	+3.0
2,734,369	-		IAI47_12925	0.55	+0.5
2,734,554	+		IAI47_12925	0.66	+1.0
2,734,555	-		IAI47_12925	0.66	+2.1
2,734,636	-		IAI47_12925	0.71	-0.7
2,734,638	-		IAI47_12925	0.71	-0.2
2,734,691	+		IAI47_12925	0.74	+1.2
2,735,007	+				+2.4
2,735,007	+				+2.4
2,735,008	-				+1.0
2,735,008	-				+1.9
2,735,238	-				+1.6
2,735,319	+				+1.6
2,735,321	+				+2.2
2,735,322	-				+0.6
2,735,331	+		IAI47_12930	0.10	+3.0
2,735,389	-		IAI47_12930	0.13	+3.2
2,735,556	+		IAI47_12930	0.23	+2.4
2,735,557	-		IAI47_12930	0.23	+1.1
2,735,673	-		IAI47_12930	0.30	+1.5
2,735,700	+		IAI47_12930	0.31	-1.8
2,735,884	+		IAI47_12930	0.42	-0.7
2,736,065	+		IAI47_12930	0.52	+0.6
2,736,233	+		IAI47_12930	0.62	-0.7
2,736,234	-		IAI47_12930	0.62	+1.3
2,736,453	-		IAI47_12930	0.75	+1.0
2,736,458	-		IAI47_12930	0.75	+1.9
2,736,458	-		IAI47_12930	0.75	+1.6
2,736,625	+		IAI47_12930	0.85	+2.4
2,736,662	+		IAI47_12930	0.87	+2.8
2,736,797	+				+0.2
2,736,836	-				+0.6
2,736,836	-				+0.6
2,736,885	+				+0.3
2,736,885	+				+1.8
2,736,885	+				+0.6
2,736,885	+				+0.6
2,736,885	+				-0.4
2,736,885	+				-0.2
2,736,885	+				-0.7
2,736,885	+				+0.2
2,736,885	+				-0.7
2,736,885	+				+0.1
2,736,885	+				-1.9
2,736,886	-				-0.1
2,736,886	-				-0.9
2,736,886	-				-0.5
2,736,886	-				+1.6
2,736,886	-				+3.1
2,736,886	-				+1.6
2,736,932	-				-1.2
2,736,932	-				+0.1
2,736,997	+		IAI47_12935	0.11	+0.1
2,736,998	-		IAI47_12935	0.11	+0.1
2,737,005	-				+0.6
2,737,036	+		IAI47_12935	0.17	+1.1
2,737,037	-		IAI47_12935	0.17	+1.6
2,737,044	+		IAI47_12935	0.18	+0.9
2,737,148	+		IAI47_12935	0.33	+1.1
2,737,148	+		IAI47_12935	0.33	+0.4
2,737,149	-		IAI47_12935	0.33	-2.5
2,737,149	-		IAI47_12935	0.33	-0.7
2,737,256	+		IAI47_12935	0.48	-1.5
2,737,257	-		IAI47_12935	0.48	+0.1
2,737,257	-		IAI47_12935	0.48	+0.1
2,737,290	+		IAI47_12935	0.53	-1.9
2,737,291	-		IAI47_12935	0.53	-0.3
2,737,291	-		IAI47_12935	0.53	+0.1
2,737,291	-		IAI47_12935	0.53	+0.9
2,737,291	-		IAI47_12935	0.53	-0.9
2,737,353	+		IAI47_12935	0.62	-3.0
2,737,353	+		IAI47_12935	0.62	-0.9
2,737,353	+		IAI47_12935	0.62	-1.5
2,737,353	+		IAI47_12935	0.62	+0.5
2,737,354	-		IAI47_12935	0.62	-1.4
2,737,354	-		IAI47_12935	0.62	+0.1
2,737,354	-		IAI47_12935	0.62	+0.4
2,737,490	+		IAI47_12935	0.82	+0.6
2,737,490	+		IAI47_12935	0.82	+1.3
2,737,491	-		IAI47_12935	0.82	-1.9
2,737,510	+		IAI47_12935	0.85	-2.3
2,737,539	+		IAI47_12935	0.89	+3.4
2,737,548	+				+1.6
2,737,548	+				-0.2
2,737,549	-				+1.6
2,737,549	-				-1.4
2,737,549	-				-0.6
2,737,549	-				+3.0
2,737,552	+				+1.6
2,737,552	+				-1.9
2,737,552	+				-0.9
2,737,552	+				+0.1
2,737,552	+				+0.6
2,737,553	-				-0.4
2,737,553	-				+0.6
2,737,553	-				-0.3
2,737,553	-				+0.3
2,737,553	-				-0.8
2,737,617	+				-0.0
2,737,638	+				+1.1
2,737,648	+				-1.7
2,737,648	+				-1.4
2,737,656	-				-2.6
2,737,656	-				-0.1
2,737,660	+				-1.2
2,737,674	-				-0.4
2,737,694	+				-0.8
2,737,773	+				-1.2
2,737,773	+				+0.6
2,737,783	+				-1.4
2,737,784	-				+1.3
2,737,792	-				-0.4
2,737,813	+				-0.2
2,737,813	+				-1.7
2,737,813	+				+0.1
2,737,813	+				+1.2
2,737,813	+				+0.6
2,737,814	-				-0.4
2,737,814	-				+0.6
2,737,814	-				-1.8
2,737,822	+				-0.2
2,737,841	+				+2.0
2,737,841	+				+2.9
2,737,841	+				-0.8
2,737,841	+				-1.2
2,737,842	-				+0.4
2,737,842	-				+0.6