Strain Fitness in Pantoea sp. MT58 around IAI47_00515

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
118,088	-				-1.4
118,088	-				-1.8
118,088	-				-1.0
118,197	-		IAI47_00515	0.31	-1.0
118,250	-		IAI47_00515	0.50	+0.0
118,250	-		IAI47_00515	0.50	-2.0
118,250	-		IAI47_00515	0.50	-0.9
118,256	-		IAI47_00515	0.52	+0.6
118,388	-				-2.0
118,388	-				-2.1
118,388	-				-0.7
118,388	-				-0.7
118,388	-				+0.6
118,388	-				+0.1
118,388	-				+2.0
118,388	-				-0.1
118,397	-				+0.3
118,397	-				+1.6
118,397	-				-1.7
118,429	-				-1.3
118,429	-				+0.0
118,429	-				-0.6
118,429	-				-1.0
118,440	-				-1.4
118,440	-				+1.4
119,111	-				+2.9
119,111	-				-2.9
119,111	-				+4.3
119,113	-				+0.6
119,113	-				+1.6
119,113	-				+1.8
119,113	-				+0.8
119,113	-				-0.7
119,113	-				-1.4
119,113	-				-2.1
119,201	+				+3.3
119,201	+				-0.1
119,201	+				+2.1
119,201	+				+2.2
119,202	-				-0.5
119,202	-				-0.7
119,217	-				+1.3
119,262	+				+0.2
119,262	+				+0.0
119,262	+				-0.7
119,263	-				+0.9
119,263	-				-0.7
119,305	+				-1.2
119,305	+				+0.2
119,305	+				+0.6
119,305	+				-0.2
119,306	-				+0.5
119,306	-				-0.2
119,306	-				+0.1
119,306	-				-1.3