Strain Fitness in Pantoea sp. MT58 around IAI47_15455

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
3,252,337	-				+2.5
3,252,337	-				+1.6
3,252,342	+				+0.9
3,252,342	+				-0.1
3,252,343	-				+0.2
3,252,343	-				+0.7
3,252,343	-				-0.7
3,252,343	-				-0.7
3,256,811	-				+0.9
3,256,814	-				-0.7
3,256,814	-				-1.5
3,256,821	-				-1.0
3,256,843	-				+0.3
3,256,843	-				-0.3
3,256,866	-				-0.2
3,256,866	-				-0.2
3,256,884	-		IAI47_15460	0.11	+1.5
3,256,910	-		IAI47_15460	0.16	+0.7
3,256,910	-		IAI47_15460	0.16	+0.8
3,256,910	-		IAI47_15460	0.16	-0.7
3,256,910	-		IAI47_15460	0.16	-1.0
3,256,970	-		IAI47_15460	0.25	+1.2
3,257,091	-		IAI47_15460	0.44	-0.7
3,257,091	-		IAI47_15460	0.44	-2.4
3,257,091	-		IAI47_15460	0.44	+1.4
3,257,091	-		IAI47_15460	0.44	+1.1
3,257,129	-		IAI47_15460	0.51	-0.1
3,257,129	-		IAI47_15460	0.51	-1.1
3,257,129	-		IAI47_15460	0.51	+1.5
3,257,129	-		IAI47_15460	0.51	+0.6
3,257,129	-		IAI47_15460	0.51	+0.3
3,257,142	-		IAI47_15460	0.53	-0.1
3,257,181	-		IAI47_15460	0.59	+2.1
3,257,181	-		IAI47_15460	0.59	+1.7
3,257,267	-		IAI47_15460	0.73	+0.9
3,257,427	-				-0.9
3,257,427	-				+0.7
3,257,453	-				+0.3