Strain Fitness in Pantoea sp. MT58 around IAI47_06900

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
1,449,210	+		IAI47_06895	0.75	-0.7
1,449,211	-		IAI47_06895	0.75	+0.1
1,449,249	+		IAI47_06895	0.76	+0.4
1,449,250	-		IAI47_06895	0.77	-0.5
1,449,250	-		IAI47_06895	0.77	+0.9
1,449,252	+		IAI47_06895	0.77	+0.9
1,449,252	+		IAI47_06895	0.77	+0.4
1,449,252	+		IAI47_06895	0.77	+0.4
1,449,253	-		IAI47_06895	0.77	-0.6
1,449,253	-		IAI47_06895	0.77	-0.4
1,449,287	+		IAI47_06895	0.78	-0.5
1,449,287	+		IAI47_06895	0.78	-0.1
1,449,288	-		IAI47_06895	0.78	+0.6
1,449,288	-		IAI47_06895	0.78	-0.6
1,449,288	-		IAI47_06895	0.78	-0.0
1,449,360	+		IAI47_06895	0.80	-0.4
1,449,368	+		IAI47_06895	0.80	-0.0
1,449,368	+		IAI47_06895	0.80	-1.0
1,449,368	+		IAI47_06895	0.80	+0.9
1,449,368	+		IAI47_06895	0.80	-0.9
1,449,368	+		IAI47_06895	0.80	+2.5
1,449,374	+		IAI47_06895	0.80	+0.1
1,449,374	+		IAI47_06895	0.80	+0.1
1,449,406	+		IAI47_06895	0.81	+1.5
1,449,406	+		IAI47_06895	0.81	+0.6
1,449,406	+		IAI47_06895	0.81	-0.1
1,449,406	+		IAI47_06895	0.81	-2.6
1,449,406	+		IAI47_06895	0.81	+1.2
1,449,407	-		IAI47_06895	0.81	+1.0
1,449,407	-		IAI47_06895	0.81	-0.8
1,449,520	-		IAI47_06895	0.85	+0.9
1,449,520	-		IAI47_06895	0.85	-0.3
1,449,557	+		IAI47_06895	0.86	+0.9
1,449,557	+		IAI47_06895	0.86	-0.2
1,449,557	+		IAI47_06895	0.86	+0.1
1,449,557	+		IAI47_06895	0.86	+1.5
1,449,557	+		IAI47_06895	0.86	+0.8
1,449,557	+		IAI47_06895	0.86	-1.9
1,449,557	+		IAI47_06895	0.86	+0.5
1,449,557	+		IAI47_06895	0.86	+0.4
1,449,557	+		IAI47_06895	0.86	+1.1
1,449,557	+		IAI47_06895	0.86	+0.1
1,449,558	-		IAI47_06895	0.86	-1.1
1,449,558	-		IAI47_06895	0.86	-0.2
1,449,558	-		IAI47_06895	0.86	+0.6
1,449,558	-		IAI47_06895	0.86	+0.5
1,449,558	-		IAI47_06895	0.86	+0.5
1,449,558	-		IAI47_06895	0.86	+0.3
1,449,558	-		IAI47_06895	0.86	+0.8
1,449,558	-		IAI47_06895	0.86	+1.3
1,449,558	-		IAI47_06895	0.86	-0.5
1,449,558	-		IAI47_06895	0.86	+2.0
1,449,558	-		IAI47_06895	0.86	+1.2
1,449,558	-		IAI47_06895	0.86	+0.9
1,449,559	+		IAI47_06895	0.86	+0.9
1,449,559	+		IAI47_06895	0.86	+0.9
1,449,559	+		IAI47_06895	0.86	+0.5
1,449,559	+		IAI47_06895	0.86	-0.6
1,449,559	+		IAI47_06895	0.86	+0.9
1,449,559	+		IAI47_06895	0.86	-0.7
1,449,559	+		IAI47_06895	0.86	+0.1
1,449,560	-		IAI47_06895	0.86	+0.5
1,449,560	-		IAI47_06895	0.86	-1.1
1,449,560	-		IAI47_06895	0.86	-0.1
1,449,560	-		IAI47_06895	0.86	-0.4
1,449,560	-		IAI47_06895	0.86	+0.1
1,449,560	-		IAI47_06895	0.86	+2.1
1,449,560	-		IAI47_06895	0.86	+0.3
1,449,639	-		IAI47_06895	0.88	+0.3
1,449,740	+				+0.4
1,449,740	+				-0.1
1,449,740	+				-0.2
1,449,741	-				+1.5
1,449,741	-				+0.7
1,449,748	-				-0.9
1,449,761	+				+0.4
1,449,762	-				+0.0
1,449,840	+				+0.8
1,449,840	+				-1.3
1,449,840	+				-1.9
1,449,840	+				-0.5
1,449,879	+				-0.5
1,449,879	+				-0.3
1,449,880	-				+1.3
1,449,880	-				-0.4
1,449,960	+				+0.9
1,449,960	+				+0.6
1,449,960	+				-0.5
1,449,961	-				+0.3
1,449,961	-				-0.1
1,449,962	+				+0.1
1,449,962	+				-1.8
1,449,962	+				-0.2
1,449,963	-				+0.6
1,449,963	-				-0.6
1,449,963	-				-0.8
1,449,963	-				+0.1
1,449,963	-				-0.5
1,450,026	+				-1.7
1,450,026	+				+1.3
1,450,027	-				-1.3
1,450,104	+				-0.7
1,450,104	+				+0.2
1,450,104	+				-1.0
1,450,104	+				+1.5
1,450,225	-				-1.5
1,450,227	-				-0.3
1,450,227	-				+0.6
1,450,227	-				+1.2
1,450,307	-		IAI47_06900	0.18	-0.4
1,450,309	+		IAI47_06900	0.18	-1.1
1,450,309	+		IAI47_06900	0.18	-0.1
1,450,310	-		IAI47_06900	0.18	-0.4
1,450,350	+		IAI47_06900	0.25	+1.2
1,450,350	+		IAI47_06900	0.25	-1.7
1,450,351	-		IAI47_06900	0.25	-1.1
1,450,351	-		IAI47_06900	0.25	+0.2
1,450,749	+		IAI47_06900	0.90	-1.4
1,450,749	+		IAI47_06900	0.90	+0.5
1,450,750	-		IAI47_06900	0.90	-0.6
1,450,813	-				-0.1
1,450,813	-				+1.9
1,450,845	+				-2.1
1,450,892	-				+0.1
1,450,893	+				+1.2
1,450,893	+				-0.1
1,450,894	-				-1.6
1,450,894	-				+1.3
1,450,896	+				+1.3
1,450,896	+				-0.9
1,450,896	+				+1.2
1,450,896	+				-0.4
1,450,896	+				+0.9
1,450,897	-				-0.0
1,450,897	-				-0.5
1,450,897	-				+0.0
1,450,897	-				+0.2
1,450,897	-				-0.1
1,450,897	-				-1.7
1,450,897	-				-0.4
1,450,897	-				-0.9
1,450,909	+				+0.7
1,450,909	+				-2.3
1,450,909	+				-1.4
1,450,909	+				+0.7
1,450,909	+				-0.3
1,450,910	-				-0.2
1,450,910	-				-0.1
1,450,910	-				-0.2
1,450,910	-				-2.1
1,451,000	+				-1.7
1,451,000	+				-1.4
1,451,000	+				+0.2
1,451,000	+				-0.1
1,451,000	+				-0.1
1,451,000	+				-3.2
1,451,001	-				+1.0
1,451,001	-				-0.9
1,451,001	-				-2.1
1,451,004	+				-0.6
1,451,004	+				-0.1
1,451,004	+				+2.1
1,451,005	-				+1.3
1,451,005	-				+1.5
1,451,005	-				-2.3
1,451,077	+				+0.3
1,451,127	+				+0.4
1,451,127	+				+0.5
1,451,127	+				+2.5
1,451,128	-				+1.3
1,451,128	-				-1.4
1,451,155	+				-0.3
1,451,155	+				+0.2
1,451,180	+		IAI47_06905	0.13	+0.6
1,451,180	+		IAI47_06905	0.13	+1.5
1,451,202	+		IAI47_06905	0.17	-0.2
1,451,202	+		IAI47_06905	0.17	+2.2
1,451,240	+		IAI47_06905	0.22	-0.1
1,451,240	+		IAI47_06905	0.22	+1.7
1,451,240	+		IAI47_06905	0.22	+0.2
1,451,240	+		IAI47_06905	0.22	+0.6
1,451,240	+		IAI47_06905	0.22	-0.3
1,451,240	+		IAI47_06905	0.22	+0.5
1,451,241	-		IAI47_06905	0.23	+2.5
1,451,241	-		IAI47_06905	0.23	+1.5
1,451,241	-		IAI47_06905	0.23	+0.1
1,451,241	-		IAI47_06905	0.23	+1.1
1,451,241	-		IAI47_06905	0.23	+1.3
1,451,243	+		IAI47_06905	0.23	+0.7
1,451,243	+		IAI47_06905	0.23	-1.4
1,451,243	+		IAI47_06905	0.23	-2.3
1,451,244	-		IAI47_06905	0.23	+0.3
1,451,244	-		IAI47_06905	0.23	-1.1
1,451,244	-		IAI47_06905	0.23	+0.7
1,451,244	-		IAI47_06905	0.23	+0.9
1,451,281	+		IAI47_06905	0.29	+2.2
1,451,281	+		IAI47_06905	0.29	-1.3
1,451,282	-		IAI47_06905	0.29	-0.7
1,451,291	+		IAI47_06905	0.30	-1.7
1,451,291	+		IAI47_06905	0.30	+0.4
1,451,291	+		IAI47_06905	0.30	-0.7
1,451,292	-		IAI47_06905	0.31	-3.1
1,451,378	+		IAI47_06905	0.44	-0.4
1,451,378	+		IAI47_06905	0.44	+1.1
1,451,379	-		IAI47_06905	0.44	+2.0
1,451,384	+		IAI47_06905	0.45	+0.6
1,451,384	+		IAI47_06905	0.45	-0.7
1,451,384	+		IAI47_06905	0.45	-2.7
1,451,384	+		IAI47_06905	0.45	-2.1
1,451,385	-		IAI47_06905	0.45	-1.9
1,451,385	-		IAI47_06905	0.45	+1.6
1,451,440	+		IAI47_06905	0.54	-0.4
1,451,491	+		IAI47_06905	0.62	-0.2
1,451,524	+		IAI47_06905	0.67	+0.1
1,451,524	+		IAI47_06905	0.67	+0.9
1,451,524	+		IAI47_06905	0.67	+1.3
1,451,524	+		IAI47_06905	0.67	-1.3
1,451,525	-		IAI47_06905	0.67	+0.1
1,451,542	+		IAI47_06905	0.69	-0.2
1,451,542	+		IAI47_06905	0.69	-1.4
1,451,597	+		IAI47_06905	0.78	+0.4
1,451,598	-		IAI47_06905	0.78	-0.7
1,451,632	+		IAI47_06905	0.83	+1.3
1,451,632	+		IAI47_06905	0.83	+0.6
1,451,651	+		IAI47_06905	0.86	+1.4
1,451,702	-				+0.5
1,451,796	-				+2.5
1,451,801	+				+0.5
1,451,801	+				+1.1
1,451,801	+				+1.6
1,451,801	+				+0.9
1,451,801	+				+0.2
1,451,802	-				+1.7
1,451,802	-				-0.8
1,451,802	-				+0.7
1,451,802	-				+1.6
1,451,802	-				+1.7