Strain Fitness in Pantoea sp. MT58 around IAI47_06260

Experiment: Ying_sugar7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep A; time point 2
1,272,865	+				+1.3
1,272,865	+				-0.3
1,272,865	+				+0.4
1,272,891	+				+1.2
1,272,891	+				+0.4
1,272,891	+				-0.1
1,272,891	+				-1.1
1,272,904	+				-0.5
1,272,904	+				-1.2
1,272,906	+				+0.1
1,272,929	+				-0.1
1,272,929	+				-0.3
1,272,929	+				+1.5
1,272,931	+				-0.4
1,272,931	+				+0.4
1,272,931	+				+0.5
1,272,931	+				-1.4
1,272,931	+				-1.4
1,272,931	+				-1.5
1,272,931	+				+0.1
1,272,931	+				+0.1
1,272,935	+				-1.7
1,272,935	+				+0.7
1,272,935	+				-1.1
1,272,951	+				+0.9
1,272,951	+				-1.2
1,272,951	+				+1.9
1,274,218	+				+0.1
1,274,218	+				-0.6
1,274,218	+				-0.6
1,274,235	+				+1.5
1,274,248	+				-2.1
1,274,248	+				+1.0
1,274,309	+		IAI47_06265	0.13	-1.4
1,274,309	+		IAI47_06265	0.13	-0.7
1,274,309	+		IAI47_06265	0.13	+0.4
1,274,443	+		IAI47_06265	0.30	+0.4
1,274,443	+		IAI47_06265	0.30	+1.0
1,274,444	-		IAI47_06265	0.30	-0.4
1,274,449	+		IAI47_06265	0.31	-0.3
1,274,449	+		IAI47_06265	0.31	-0.9
1,274,450	-		IAI47_06265	0.31	+0.2
1,274,450	-		IAI47_06265	0.31	+2.2
1,274,450	-		IAI47_06265	0.31	-0.0
1,274,452	+		IAI47_06265	0.31	+1.3
1,274,452	+		IAI47_06265	0.31	+0.2
1,274,452	+		IAI47_06265	0.31	+0.5
1,274,452	+		IAI47_06265	0.31	-0.1
1,274,453	-		IAI47_06265	0.31	-1.1
1,274,503	+		IAI47_06265	0.37	+0.6
1,274,504	-		IAI47_06265	0.38	-2.4
1,274,596	+		IAI47_06265	0.49	+0.5
1,274,597	-		IAI47_06265	0.49	+0.1
1,274,597	-		IAI47_06265	0.49	+0.8
1,274,614	+		IAI47_06265	0.52	+0.3
1,274,614	+		IAI47_06265	0.52	-1.8
1,274,615	-		IAI47_06265	0.52	+0.6
1,274,645	-		IAI47_06265	0.56	+1.7
1,274,645	-		IAI47_06265	0.56	+1.5
1,274,645	-		IAI47_06265	0.56	-0.1
1,274,645	-		IAI47_06265	0.56	-0.2
1,274,645	-		IAI47_06265	0.56	-0.9
1,274,759	+		IAI47_06265	0.70	+0.9
1,274,759	+		IAI47_06265	0.70	+2.5
1,274,759	+		IAI47_06265	0.70	+0.7
1,274,759	+		IAI47_06265	0.70	-0.6
1,274,759	+		IAI47_06265	0.70	+0.9
1,274,759	+		IAI47_06265	0.70	+0.3
1,274,759	+		IAI47_06265	0.70	-0.9
1,274,759	+		IAI47_06265	0.70	-1.1
1,274,760	-		IAI47_06265	0.70	-0.5
1,274,760	-		IAI47_06265	0.70	-0.3
1,274,760	-		IAI47_06265	0.70	+1.5
1,274,772	+		IAI47_06265	0.72	+0.1
1,274,772	+		IAI47_06265	0.72	-0.3
1,274,772	+		IAI47_06265	0.72	+0.9
1,274,773	-		IAI47_06265	0.72	+2.3
1,274,773	-		IAI47_06265	0.72	+1.2
1,274,773	-		IAI47_06265	0.72	+0.8
1,274,773	-		IAI47_06265	0.72	-0.4
1,274,773	-		IAI47_06265	0.72	-0.5
1,274,845	+		IAI47_06265	0.81	-0.5
1,274,845	+		IAI47_06265	0.81	+0.3
1,274,845	+		IAI47_06265	0.81	-0.7
1,274,846	-		IAI47_06265	0.81	-0.4
1,274,846	-		IAI47_06265	0.81	-0.2
1,274,879	-		IAI47_06265	0.85	+1.7
1,274,888	+		IAI47_06265	0.87	+0.1
1,274,888	+		IAI47_06265	0.87	-1.2
1,274,888	+		IAI47_06265	0.87	+1.4
1,274,888	+		IAI47_06265	0.87	-0.1
1,274,889	-		IAI47_06265	0.87	-0.9
1,274,978	+				+0.6
1,274,978	+				+0.2
1,274,979	-				+0.6
1,275,015	-				-0.3
1,275,015	-				-0.1
1,275,020	+				+0.9
1,275,046	+				-0.1
1,275,070	-				+2.1
1,275,080	+				-1.4
1,275,152	+				+1.5
1,275,153	-				+1.5
1,275,201	+				+1.5
1,275,201	+				-1.4
1,275,201	+				-2.1
1,275,202	-				-3.3
1,275,202	-				-2.7
1,275,202	-				-1.9