Strain Fitness in Pantoea sp. MT58 around IAI47_12070

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
2,554,680	+		IAI47_12060	0.60	-2.5
2,554,681	-		IAI47_12060	0.60	-2.2
2,554,722	-		IAI47_12060	0.64	-3.0
2,554,722	-		IAI47_12060	0.64	-2.3
2,554,752	+		IAI47_12060	0.66	-0.3
2,554,815	+		IAI47_12060	0.71	-0.3
2,554,816	-		IAI47_12060	0.71	-0.9
2,554,816	-		IAI47_12060	0.71	-1.3
2,554,927	-		IAI47_12060	0.80	-1.7
2,554,934	-		IAI47_12060	0.81	-1.3
2,554,988	+		IAI47_12060	0.85	-0.9
2,554,989	-		IAI47_12060	0.85	-2.5
2,555,104	-				-0.3
2,555,111	-				-1.5
2,555,156	-				-3.3
2,555,156	-				-1.3
2,555,167	-				-1.3
2,555,196	+				-2.2
2,555,197	-				-0.5
2,555,197	-				-0.3
2,555,204	+				-1.3
2,555,205	-				-2.2
2,555,205	-				-1.7
2,555,205	-				-1.3
2,555,205	-				-1.7
2,555,205	-				-1.9
2,555,205	-				-1.7
2,555,205	-				-2.8
2,555,205	-				-2.9
2,555,603	-				-0.3
2,555,647	+				-1.3
2,555,648	-				-0.5
2,555,648	-				-1.1
2,555,648	-				-0.7
2,555,660	-				-0.3
2,555,660	-				-0.9
2,556,396	-				+0.2
2,556,396	-				+1.7
2,556,430	-				-1.3
2,556,430	-				+0.3