Strain Fitness in Pantoea sp. MT58 around IAI47_02535

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
525,932	-				+1.1
525,932	-				+0.3
525,947	-				-1.7
525,947	-				+0.0
525,966	-				-0.6
525,966	-				-0.6
525,966	-				-0.0
525,991	+				+0.0
525,992	-				-1.5
525,992	-				-1.1
525,992	-				+0.1
525,992	-				-0.3
525,994	-				-0.6
526,080	+				+2.0
526,080	+				-1.3
526,081	-				-0.2
526,081	-				-0.9
526,081	-				-0.3
526,082	+				-0.5
526,090	-				-0.3
526,090	-				-0.8
526,090	-				+0.7
527,186	-				+1.0
527,186	-				-1.6
527,186	-				+0.3
527,190	+				+0.1
527,190	+				-1.3
527,190	+				-1.8
527,190	+				-1.9
527,190	+				-1.7
527,190	+				-2.2
527,190	+				-1.6
527,197	+				-0.0
527,197	+				+1.0
527,197	+				-0.1
527,197	+				+1.2
527,197	+				+0.5
527,197	+				-0.9
527,197	+				-0.5
527,197	+				-0.6
527,217	+				+0.7
527,785	+				-0.1
527,786	-				-0.7
527,786	-				-0.1
527,855	+				-0.7
527,856	-				+2.1
527,856	-				-1.9
527,928	+				+0.2
527,934	+				-0.2
527,934	+				-0.7
528,022	+				+0.1
528,029	+				-0.3
528,029	+				+1.5
528,029	+				+0.2
528,029	+				+0.4
528,036	+				+0.4
528,130	+				-1.9
528,130	+				-0.8
528,130	+				-1.1