Strain Fitness in Pantoea sp. MT58 around IAI47_11750

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
2,489,752	+				+0.1
2,489,752	+				+0.7
2,489,752	+				+1.5
2,489,752	+				-0.1
2,489,752	+				+0.8
2,489,752	+				+0.8
2,489,752	+				+1.1
2,489,753	-				+0.8
2,489,753	-				-1.2
2,489,753	-				+0.0
2,489,765	+				+1.2
2,489,765	+				-1.8
2,489,766	-				+0.7
2,489,766	-				+0.5
2,489,766	-				-1.4
2,489,775	+				+0.3
2,489,775	+				+0.5
2,489,775	+				-0.3
2,489,776	-				+0.3
2,489,776	-				+0.3
2,489,776	-				-2.4
2,489,776	-				+2.2
2,489,779	+				-0.8
2,489,779	+				+0.8
2,489,779	+				+0.9
2,489,780	-				+0.4
2,489,780	-				-0.8
2,489,844	+				+0.0
2,489,844	+				+1.8
2,489,844	+				-0.2
2,489,845	-				-0.2
2,489,845	-				+0.4
2,489,850	+				-0.8
2,489,850	+				-0.3
2,489,850	+				-1.4
2,489,850	+				-0.2
2,489,850	+				+0.2
2,489,851	-				-1.6
2,489,851	-				-0.1
2,489,851	-				+0.4
2,489,851	-				+0.7
2,489,852	+				+0.8
2,489,853	-				+0.1
2,489,853	-				+1.0
2,489,887	+				+0.4
2,489,888	-				+1.6
2,489,888	-				+0.6
2,489,892	+				-2.9
2,489,893	-				-0.3
2,489,910	+				+1.0
2,489,910	+				-0.6
2,489,911	-				-0.3
2,489,911	-				+0.3
2,489,940	+				+0.1
2,489,940	+				+1.5
2,489,940	+				+0.8
2,489,940	+				+1.8
2,489,940	+				+0.1
2,489,940	+				-0.4
2,489,940	+				+1.3
2,489,940	+				-0.7
2,489,940	+				+0.2
2,489,941	-				-0.2
2,489,941	-				-1.7
2,489,941	-				-0.5
2,489,941	-				-0.8
2,489,941	-				+2.1
2,489,962	-				-1.6
2,489,984	-				+0.9
2,489,984	-				-0.7
2,489,984	-				+1.7
2,490,173	-		IAI47_11745	0.29	+1.1
2,490,184	+		IAI47_11745	0.30	+1.0
2,490,185	-		IAI47_11745	0.30	-0.5
2,490,185	-		IAI47_11745	0.30	+0.4
2,490,185	-		IAI47_11745	0.30	-0.2
2,490,211	+		IAI47_11745	0.34	-0.5
2,490,211	+		IAI47_11745	0.34	-1.8
2,490,246	+		IAI47_11745	0.39	+1.8
2,490,246	+		IAI47_11745	0.39	-1.8
2,490,246	+		IAI47_11745	0.39	-0.0
2,490,246	+		IAI47_11745	0.39	-1.6
2,490,246	+		IAI47_11745	0.39	+0.7
2,490,247	-		IAI47_11745	0.39	-1.2
2,490,316	+		IAI47_11745	0.48	-0.2
2,490,316	+		IAI47_11745	0.48	-1.2
2,490,317	-		IAI47_11745	0.48	-1.6
2,490,317	-		IAI47_11745	0.48	-1.1
2,490,317	-		IAI47_11745	0.48	+1.2
2,490,317	-		IAI47_11745	0.48	+0.4
2,490,384	+		IAI47_11745	0.57	-0.1
2,490,385	-		IAI47_11745	0.58	+0.8
2,490,413	+		IAI47_11745	0.61	+3.0
2,490,414	-		IAI47_11745	0.62	+1.8
2,490,414	-		IAI47_11745	0.62	-1.8
2,490,470	-		IAI47_11745	0.69	-0.5
2,490,472	+		IAI47_11745	0.69	-0.2
2,490,472	+		IAI47_11745	0.69	-1.1
2,490,473	-		IAI47_11745	0.70	-0.6
2,490,473	-		IAI47_11745	0.70	+0.7
2,490,532	+		IAI47_11745	0.78	+0.8
2,490,533	-		IAI47_11745	0.78	-0.5
2,490,533	-		IAI47_11745	0.78	-1.2
2,490,535	+		IAI47_11745	0.78	-1.8
2,490,535	+		IAI47_11745	0.78	-0.2
2,490,535	+		IAI47_11745	0.78	-2.2
2,490,535	+		IAI47_11745	0.78	+1.1
2,490,536	-		IAI47_11745	0.78	+0.4
2,490,536	-		IAI47_11745	0.78	-2.0
2,490,538	+		IAI47_11745	0.78	+0.0
2,490,538	+		IAI47_11745	0.78	-0.6
2,490,539	-		IAI47_11745	0.78	+0.2
2,490,539	-		IAI47_11745	0.78	+0.1
2,490,539	-		IAI47_11745	0.78	+0.3
2,490,550	-		IAI47_11745	0.80	-0.6
2,490,550	-		IAI47_11745	0.80	+1.5
2,490,630	+				+1.4
2,490,630	+				-0.5
2,490,630	+				-0.0
2,490,630	+				-0.2
2,490,631	-				-0.2
2,490,631	-				+1.4
2,490,631	-				+0.0
2,490,631	-				-0.9
2,490,648	+				+0.0
2,490,649	-				+0.1
2,490,649	-				+0.4
2,490,649	-				-0.7
2,490,677	-				-0.0
2,490,677	-				-0.4
2,490,677	-				+0.5
2,490,677	-				+1.6
2,490,677	-				+1.2
2,490,687	-				+0.2
2,490,693	+				+0.9
2,490,693	+				+0.2
2,490,693	+				-0.5
2,490,694	-				+0.3
2,490,694	-				-1.4
2,490,694	-				+0.2
2,490,694	-				-0.2
2,490,738	+				+0.3
2,490,739	-				+0.1
2,490,739	-				+0.3
2,490,739	-				+1.2
2,490,739	-				+1.2
2,490,742	-				-0.2
2,490,813	+				-2.2
2,490,814	-				+0.9
2,490,814	-				+0.9
2,490,814	-				-1.8
2,490,820	+				-0.9
2,490,821	-				-0.2
2,490,821	-				+0.2
2,490,833	+		IAI47_11750	0.10	-0.4
2,490,834	-		IAI47_11750	0.10	-1.8
2,490,851	-		IAI47_11750	0.12	-0.4
2,490,851	-		IAI47_11750	0.12	-0.3
2,490,885	-		IAI47_11750	0.16	-0.4
2,491,006	+		IAI47_11750	0.29	-0.2
2,491,006	+		IAI47_11750	0.29	-1.0
2,491,038	-		IAI47_11750	0.32	-0.8
2,491,151	+		IAI47_11750	0.44	-0.8
2,491,151	+		IAI47_11750	0.44	+0.1
2,491,151	+		IAI47_11750	0.44	-0.0
2,491,238	+		IAI47_11750	0.53	+0.2
2,491,238	+		IAI47_11750	0.53	+0.0
2,491,239	-		IAI47_11750	0.53	-0.8
2,491,264	+		IAI47_11750	0.56	-0.8
2,491,264	+		IAI47_11750	0.56	-0.3
2,491,281	+		IAI47_11750	0.58	-1.1
2,491,282	-		IAI47_11750	0.58	-1.9
2,491,326	+		IAI47_11750	0.63	+1.4
2,491,360	+		IAI47_11750	0.66	-0.9
2,491,360	+		IAI47_11750	0.66	-0.4
2,491,360	+		IAI47_11750	0.66	+0.4
2,491,361	-		IAI47_11750	0.66	-0.1
2,491,361	-		IAI47_11750	0.66	-1.8
2,491,371	+		IAI47_11750	0.67	-0.1
2,491,463	-		IAI47_11750	0.77	-0.5
2,491,558	-		IAI47_11750	0.87	+0.2
2,491,558	-		IAI47_11750	0.87	+1.4
2,491,622	+				+0.8
2,491,622	+				+1.2
2,491,630	+				-0.8
2,491,662	+				+0.2
2,491,807	+				-0.5
2,491,807	+				+0.8
2,491,811	+				+0.4
2,491,811	+				-0.0
2,491,811	+				-0.5
2,491,812	-				-1.6
2,491,812	-				+2.0
2,491,819	+				+1.1
2,491,819	+				-0.5
2,491,819	+				-0.8
2,491,819	+				+1.3
2,491,819	+				-2.2
2,491,819	+				+0.1
2,491,819	+				-0.8
2,491,820	-				-1.0
2,491,820	-				+1.4
2,491,820	-				-0.1
2,491,820	-				+0.1
2,491,820	-				+0.8
2,491,826	+				+1.6
2,491,827	-				-0.1
2,491,904	+				+1.1
2,491,905	-				+0.8
2,492,040	-				+0.6
2,492,075	+		IAI47_11755	0.11	+0.2
2,492,077	+		IAI47_11755	0.11	-1.1
2,492,077	+		IAI47_11755	0.11	+0.2
2,492,078	-		IAI47_11755	0.11	+0.8
2,492,193	+		IAI47_11755	0.18	+0.0
2,492,202	+		IAI47_11755	0.19	+0.0
2,492,202	+		IAI47_11755	0.19	-0.2
2,492,202	+		IAI47_11755	0.19	-1.0
2,492,202	+		IAI47_11755	0.19	-0.4
2,492,202	+		IAI47_11755	0.19	-0.7
2,492,202	+		IAI47_11755	0.19	+0.4
2,492,203	-		IAI47_11755	0.19	+0.7
2,492,203	-		IAI47_11755	0.19	+0.5
2,492,227	+		IAI47_11755	0.20	-1.2
2,492,227	+		IAI47_11755	0.20	-1.4
2,492,227	+		IAI47_11755	0.20	+0.8
2,492,227	+		IAI47_11755	0.20	+0.7
2,492,227	+		IAI47_11755	0.20	-0.2
2,492,227	+		IAI47_11755	0.20	+0.2
2,492,227	+		IAI47_11755	0.20	+2.2
2,492,228	-		IAI47_11755	0.20	+0.8
2,492,228	-		IAI47_11755	0.20	+0.1
2,492,228	-		IAI47_11755	0.20	+1.2
2,492,228	-		IAI47_11755	0.20	+0.3
2,492,228	-		IAI47_11755	0.20	+0.2
2,492,228	-		IAI47_11755	0.20	-0.6
2,492,283	-		IAI47_11755	0.23	+1.5
2,492,283	-		IAI47_11755	0.23	-0.4
2,492,314	+		IAI47_11755	0.25	+0.8
2,492,344	+		IAI47_11755	0.27	+0.2
2,492,344	+		IAI47_11755	0.27	-0.2
2,492,344	+		IAI47_11755	0.27	+0.4
2,492,344	+		IAI47_11755	0.27	+0.2
2,492,344	+		IAI47_11755	0.27	+1.3
2,492,377	+		IAI47_11755	0.29	-0.6
2,492,377	+		IAI47_11755	0.29	-1.3
2,492,377	+		IAI47_11755	0.29	-0.7
2,492,378	-		IAI47_11755	0.29	+0.6
2,492,378	-		IAI47_11755	0.29	+1.4
2,492,381	-		IAI47_11755	0.29	-0.6
2,492,381	-		IAI47_11755	0.29	-0.6
2,492,392	+		IAI47_11755	0.30	+0.3
2,492,392	+		IAI47_11755	0.30	-0.6
2,492,392	+		IAI47_11755	0.30	-1.5
2,492,392	+		IAI47_11755	0.30	+0.5
2,492,392	+		IAI47_11755	0.30	+0.7
2,492,392	+		IAI47_11755	0.30	-0.7
2,492,392	+		IAI47_11755	0.30	-2.4
2,492,392	+		IAI47_11755	0.30	+0.5
2,492,393	-		IAI47_11755	0.30	+0.3
2,492,393	-		IAI47_11755	0.30	-1.1
2,492,393	-		IAI47_11755	0.30	-0.8
2,492,393	-		IAI47_11755	0.30	-2.4
2,492,393	-		IAI47_11755	0.30	+0.5
2,492,433	+		IAI47_11755	0.32	+0.4
2,492,446	-		IAI47_11755	0.33	-1.1
2,492,509	+		IAI47_11755	0.37	+1.0
2,492,509	+		IAI47_11755	0.37	+0.8
2,492,509	+		IAI47_11755	0.37	-1.4
2,492,509	+		IAI47_11755	0.37	-1.0
2,492,509	+		IAI47_11755	0.37	+0.6
2,492,509	+		IAI47_11755	0.37	-1.8
2,492,510	-		IAI47_11755	0.37	+0.3
2,492,510	-		IAI47_11755	0.37	+0.0
2,492,510	-		IAI47_11755	0.37	+0.1
2,492,510	-		IAI47_11755	0.37	-0.4
2,492,512	+		IAI47_11755	0.37	+0.8
2,492,512	+		IAI47_11755	0.37	-2.2
2,492,512	+		IAI47_11755	0.37	-0.7
2,492,512	+		IAI47_11755	0.37	-0.5
2,492,512	+		IAI47_11755	0.37	-1.2
2,492,512	+		IAI47_11755	0.37	+1.0
2,492,513	-		IAI47_11755	0.37	-0.2
2,492,513	-		IAI47_11755	0.37	+1.5
2,492,513	-		IAI47_11755	0.37	+0.0
2,492,513	-		IAI47_11755	0.37	+1.0
2,492,513	-		IAI47_11755	0.37	-0.1
2,492,513	-		IAI47_11755	0.37	+0.6
2,492,513	-		IAI47_11755	0.37	+0.5
2,492,518	-		IAI47_11755	0.37	+1.2
2,492,587	+		IAI47_11755	0.41	-0.7
2,492,587	+		IAI47_11755	0.41	-1.2
2,492,588	-		IAI47_11755	0.42	-0.2
2,492,620	+		IAI47_11755	0.43	+0.6
2,492,620	+		IAI47_11755	0.43	-0.0
2,492,620	+		IAI47_11755	0.43	+0.2
2,492,620	+		IAI47_11755	0.43	+1.5
2,492,621	-		IAI47_11755	0.43	-0.4
2,492,621	-		IAI47_11755	0.43	-0.6
2,492,621	-		IAI47_11755	0.43	+0.2
2,492,621	-		IAI47_11755	0.43	-0.2
2,492,626	+		IAI47_11755	0.44	-0.0
2,492,627	-		IAI47_11755	0.44	-0.1
2,492,646	+		IAI47_11755	0.45	-1.8