Strain Fitness in Pantoea sp. MT58 around IAI47_07725

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,636,934	+				-0.5
1,636,934	+				+1.0
1,636,935	-				-2.3
1,636,935	-				+0.6
1,636,935	-				-0.4
1,636,935	-				-0.8
1,636,951	+				-2.1
1,636,951	+				+1.0
1,636,952	-				-0.7
1,636,952	-				-1.1
1,636,952	-				-2.8
1,636,952	-				-0.1
1,636,952	-				+0.7
1,636,998	+		IAI47_07720	0.22	-0.3
1,636,999	-		IAI47_07720	0.22	-0.1
1,637,020	+		IAI47_07720	0.32	-0.8
1,637,021	-		IAI47_07720	0.33	+0.9
1,637,021	-		IAI47_07720	0.33	+1.3
1,637,063	+		IAI47_07720	0.53	+1.5
1,637,063	+		IAI47_07720	0.53	+0.3
1,637,063	+		IAI47_07720	0.53	-0.3
1,637,063	+		IAI47_07720	0.53	-0.5
1,637,063	+		IAI47_07720	0.53	+0.7
1,637,063	+		IAI47_07720	0.53	+0.7
1,637,063	+		IAI47_07720	0.53	+1.1
1,637,063	+		IAI47_07720	0.53	-0.4
1,637,063	+		IAI47_07720	0.53	+0.2
1,637,063	+		IAI47_07720	0.53	-0.7
1,637,063	+		IAI47_07720	0.53	+0.7
1,637,063	+		IAI47_07720	0.53	-0.6
1,637,064	-		IAI47_07720	0.54	+2.0
1,637,064	-		IAI47_07720	0.54	-1.6
1,637,064	-		IAI47_07720	0.54	-0.8
1,637,064	-		IAI47_07720	0.54	-0.3
1,637,064	-		IAI47_07720	0.54	+2.2
1,637,064	-		IAI47_07720	0.54	-1.3
1,637,064	-		IAI47_07720	0.54	+1.1
1,637,064	-		IAI47_07720	0.54	+0.0
1,637,075	+		IAI47_07720	0.59	+0.9
1,637,075	+		IAI47_07720	0.59	+1.1
1,637,075	+		IAI47_07720	0.59	+0.4
1,637,076	-		IAI47_07720	0.60	+0.0
1,637,076	-		IAI47_07720	0.60	+0.7
1,637,076	-		IAI47_07720	0.60	+0.1
1,637,076	-		IAI47_07720	0.60	-2.3
1,637,111	+		IAI47_07720	0.77	-1.3
1,637,111	+		IAI47_07720	0.77	-2.1
1,637,112	-		IAI47_07720	0.77	-1.1
1,637,138	-				-0.6
1,637,138	-				+0.1
1,637,173	+				-0.1
1,637,173	+				-0.3
1,637,173	+				-0.8
1,637,173	+				+0.6
1,637,173	+				+0.6
1,637,173	+				-1.6
1,637,173	+				-0.1
1,637,173	+				-1.6
1,637,173	+				+1.1
1,637,173	+				+0.7
1,637,173	+				+0.5
1,637,173	+				-1.1
1,637,174	-				-0.4
1,637,174	-				-1.7
1,637,174	-				+0.6
1,637,174	-				+0.4
1,637,174	-				-0.3
1,637,174	-				+0.2
1,637,174	-				+0.7
1,637,174	-				-0.3
1,637,174	-				-0.1
1,637,174	-				+0.2
1,637,250	+				+0.6
1,637,250	+				-0.5
1,637,250	+				+0.8
1,637,251	-				-0.3
1,637,251	-				-0.1
1,637,272	+				+0.7
1,637,273	-				-0.3
1,637,278	-				+0.4
1,637,278	-				-1.7
1,637,298	-				-1.2
1,637,298	-				-1.0
1,637,298	-				+0.5
1,637,395	+				-2.1
1,637,395	+				+0.4
1,637,396	-				+0.2
1,637,396	-				-1.3
1,637,396	-				+0.9
1,637,396	-				-1.6
1,637,403	-				-0.5
1,637,403	-				-1.0
1,637,449	-				-0.5
1,637,452	+				-1.1
1,637,462	+				-0.2
1,637,462	+				+0.2
1,637,462	+				-0.0
1,637,463	-				-0.8
1,637,542	-				-0.7
1,637,577	+				+0.9
1,637,578	-				+0.2
1,637,595	+				-1.3
1,637,595	+				-0.5
1,637,595	+				-1.4
1,637,595	+				-0.3
1,637,595	+				-1.6
1,637,596	-				+0.6
1,637,596	-				+0.5
1,637,596	-				-0.8
1,637,596	-				+1.1
1,637,596	-				+1.4
1,637,596	-				-0.4
1,637,692	+				-0.4
1,637,693	-				+2.1
1,637,697	+				+0.3
1,637,698	-				-0.6
1,637,716	+				-0.5
1,637,717	-				+1.1
1,637,733	-				-0.1
1,637,738	+				-0.7
1,637,738	+				+1.0
1,637,738	+				-0.1
1,637,739	-				+0.5
1,637,739	-				+0.0
1,637,765	+				-0.8
1,637,766	-				+0.1
1,637,766	-				+0.9
1,637,778	-				-0.5
1,637,789	+				+0.6
1,637,789	+				-0.7
1,637,801	-				-1.6
1,637,801	-				-1.3
1,637,801	-				+0.3
1,637,850	+				+0.2
1,637,851	-				+0.0
1,637,851	-				-1.0
1,637,862	+				-1.3
1,637,863	-				+0.0
1,637,868	+				-1.1
1,637,868	+				+0.7
1,637,868	+				+1.0
1,637,869	-				+0.7
1,637,869	-				-1.1
1,637,898	+				-1.6
1,637,898	+				+0.1
1,637,899	-				+1.2
1,637,941	+				+1.5
1,637,941	+				-2.3
1,637,941	+				-0.3
1,637,941	+				-0.3
1,637,941	+				+0.8
1,637,942	-				+0.1
1,637,942	-				-0.2
1,637,942	-				-0.1
1,638,020	+		IAI47_07725	0.12	+0.5
1,638,020	+		IAI47_07725	0.12	-1.0
1,638,020	+		IAI47_07725	0.12	+1.4
1,638,020	+		IAI47_07725	0.12	+1.5
1,638,021	-		IAI47_07725	0.12	-1.3
1,638,021	-		IAI47_07725	0.12	+0.2
1,638,053	+		IAI47_07725	0.14	+0.2
1,638,054	-		IAI47_07725	0.15	+0.3
1,638,066	+		IAI47_07725	0.15	+0.0
1,638,066	+		IAI47_07725	0.15	+1.7
1,638,066	+		IAI47_07725	0.15	+1.2
1,638,066	+		IAI47_07725	0.15	+0.7
1,638,066	+		IAI47_07725	0.15	+0.7
1,638,067	-		IAI47_07725	0.15	+0.2
1,638,067	-		IAI47_07725	0.15	-0.1
1,638,085	+		IAI47_07725	0.17	+0.5
1,638,086	-		IAI47_07725	0.17	-0.7
1,638,115	+		IAI47_07725	0.19	-2.4
1,638,115	+		IAI47_07725	0.19	+0.4
1,638,115	+		IAI47_07725	0.19	+0.2
1,638,115	+		IAI47_07725	0.19	-1.3
1,638,116	-		IAI47_07725	0.19	+0.0
1,638,116	-		IAI47_07725	0.19	+0.2
1,638,118	+		IAI47_07725	0.19	+2.2
1,638,118	+		IAI47_07725	0.19	+0.2
1,638,119	-		IAI47_07725	0.19	+0.7
1,638,119	-		IAI47_07725	0.19	+0.7
1,638,120	+		IAI47_07725	0.19	+1.1
1,638,121	-		IAI47_07725	0.19	+0.7
1,638,121	-		IAI47_07725	0.19	-0.8
1,638,121	-		IAI47_07725	0.19	-0.3
1,638,121	-		IAI47_07725	0.19	+0.6
1,638,135	+		IAI47_07725	0.20	-1.1
1,638,136	-		IAI47_07725	0.20	-1.3
1,638,161	+		IAI47_07725	0.22	+0.9
1,638,162	-		IAI47_07725	0.22	-1.0
1,638,162	-		IAI47_07725	0.22	-0.7
1,638,171	+		IAI47_07725	0.22	+1.0
1,638,172	-		IAI47_07725	0.22	+0.6
1,638,190	+		IAI47_07725	0.23	+0.9
1,638,190	+		IAI47_07725	0.23	+1.7
1,638,207	+		IAI47_07725	0.24	-0.3
1,638,207	+		IAI47_07725	0.24	-1.7
1,638,208	-		IAI47_07725	0.25	-0.1
1,638,208	-		IAI47_07725	0.25	+0.2
1,638,208	-		IAI47_07725	0.25	+1.0
1,638,208	-		IAI47_07725	0.25	+0.7
1,638,208	-		IAI47_07725	0.25	+0.1
1,638,223	+		IAI47_07725	0.26	+0.7
1,638,224	-		IAI47_07725	0.26	-0.6
1,638,255	+		IAI47_07725	0.28	-0.2
1,638,255	+		IAI47_07725	0.28	-0.2
1,638,299	+		IAI47_07725	0.30	+1.1
1,638,328	+		IAI47_07725	0.32	+1.0
1,638,328	+		IAI47_07725	0.32	+0.3
1,638,328	+		IAI47_07725	0.32	+0.9
1,638,329	-		IAI47_07725	0.32	-1.0
1,638,329	-		IAI47_07725	0.32	-0.6
1,638,329	-		IAI47_07725	0.32	+0.7
1,638,329	-		IAI47_07725	0.32	+0.7
1,638,329	-		IAI47_07725	0.32	-1.1
1,638,329	-		IAI47_07725	0.32	+2.5
1,638,330	+		IAI47_07725	0.32	+0.7
1,638,330	+		IAI47_07725	0.32	-0.1
1,638,330	+		IAI47_07725	0.32	+0.7
1,638,330	+		IAI47_07725	0.32	-0.1
1,638,330	+		IAI47_07725	0.32	-0.3
1,638,330	+		IAI47_07725	0.32	-1.5
1,638,330	+		IAI47_07725	0.32	+1.5
1,638,330	+		IAI47_07725	0.32	+0.6
1,638,330	+		IAI47_07725	0.32	+2.6
1,638,330	+		IAI47_07725	0.32	+0.7
1,638,330	+		IAI47_07725	0.32	+0.8
1,638,331	-		IAI47_07725	0.33	-0.2
1,638,331	-		IAI47_07725	0.33	+1.0
1,638,331	-		IAI47_07725	0.33	+0.5
1,638,331	-		IAI47_07725	0.33	+1.7
1,638,331	-		IAI47_07725	0.33	+0.1
1,638,331	-		IAI47_07725	0.33	+0.7
1,638,331	-		IAI47_07725	0.33	-0.5
1,638,331	-		IAI47_07725	0.33	-1.6
1,638,331	-		IAI47_07725	0.33	+0.2
1,638,334	+		IAI47_07725	0.33	+1.0
1,638,334	+		IAI47_07725	0.33	-0.5
1,638,335	-		IAI47_07725	0.33	-1.3
1,638,335	-		IAI47_07725	0.33	+0.4
1,638,335	-		IAI47_07725	0.33	+0.7
1,638,376	+		IAI47_07725	0.35	-0.5
1,638,377	-		IAI47_07725	0.36	+1.4
1,638,377	-		IAI47_07725	0.36	-0.6
1,638,384	+		IAI47_07725	0.36	+0.7
1,638,384	+		IAI47_07725	0.36	+0.6
1,638,384	+		IAI47_07725	0.36	+0.1
1,638,384	+		IAI47_07725	0.36	-0.6
1,638,384	+		IAI47_07725	0.36	+1.3
1,638,384	+		IAI47_07725	0.36	-0.4
1,638,384	+		IAI47_07725	0.36	+1.2
1,638,384	+		IAI47_07725	0.36	+0.2
1,638,384	+		IAI47_07725	0.36	-0.3
1,638,384	+		IAI47_07725	0.36	-0.5
1,638,385	-		IAI47_07725	0.36	+0.3
1,638,385	-		IAI47_07725	0.36	-0.7
1,638,385	-		IAI47_07725	0.36	+0.5
1,638,385	-		IAI47_07725	0.36	-0.4
1,638,385	-		IAI47_07725	0.36	+0.4
1,638,385	-		IAI47_07725	0.36	-0.6
1,638,385	-		IAI47_07725	0.36	+1.1
1,638,385	-		IAI47_07725	0.36	+0.6
1,638,385	-		IAI47_07725	0.36	+1.0
1,638,385	-		IAI47_07725	0.36	-1.4
1,638,385	-		IAI47_07725	0.36	+0.7
1,638,385	-		IAI47_07725	0.36	+0.1
1,638,389	+		IAI47_07725	0.36	+1.0
1,638,389	+		IAI47_07725	0.36	+0.3
1,638,408	+		IAI47_07725	0.38	-1.1
1,638,408	+		IAI47_07725	0.38	-0.2
1,638,409	-		IAI47_07725	0.38	-0.4
1,638,409	-		IAI47_07725	0.38	-0.5
1,638,409	-		IAI47_07725	0.38	-0.3
1,638,425	+		IAI47_07725	0.39	-1.1
1,638,425	+		IAI47_07725	0.39	-0.5
1,638,445	+		IAI47_07725	0.40	+0.7
1,638,446	-		IAI47_07725	0.40	+0.3
1,638,446	-		IAI47_07725	0.40	-2.3
1,638,446	-		IAI47_07725	0.40	-0.1
1,638,460	+		IAI47_07725	0.41	-0.4
1,638,460	+		IAI47_07725	0.41	+0.1
1,638,460	+		IAI47_07725	0.41	+0.0
1,638,460	+		IAI47_07725	0.41	-0.4
1,638,460	+		IAI47_07725	0.41	-1.8
1,638,460	+		IAI47_07725	0.41	-1.6
1,638,460	+		IAI47_07725	0.41	-0.3
1,638,460	+		IAI47_07725	0.41	+0.6
1,638,461	-		IAI47_07725	0.41	-0.3
1,638,461	-		IAI47_07725	0.41	+1.5
1,638,461	-		IAI47_07725	0.41	+0.7
1,638,461	-		IAI47_07725	0.41	-1.1
1,638,461	-		IAI47_07725	0.41	-0.0
1,638,461	-		IAI47_07725	0.41	-2.7
1,638,461	-		IAI47_07725	0.41	+1.3
1,638,461	-		IAI47_07725	0.41	+0.0
1,638,461	-		IAI47_07725	0.41	-1.1
1,638,461	-		IAI47_07725	0.41	-1.0
1,638,461	-		IAI47_07725	0.41	-0.7
1,638,462	+		IAI47_07725	0.41	-0.3
1,638,536	+		IAI47_07725	0.46	-3.0
1,638,582	+		IAI47_07725	0.49	-1.0
1,638,582	+		IAI47_07725	0.49	+0.6
1,638,582	+		IAI47_07725	0.49	-1.3
1,638,583	-		IAI47_07725	0.49	+1.4
1,638,583	-		IAI47_07725	0.49	+0.2
1,638,583	-		IAI47_07725	0.49	+1.0
1,638,738	+		IAI47_07725	0.59	+0.1
1,638,739	-		IAI47_07725	0.59	-0.3
1,638,771	+		IAI47_07725	0.61	-0.8
1,638,771	+		IAI47_07725	0.61	-0.8
1,638,771	+		IAI47_07725	0.61	-1.6
1,638,771	+		IAI47_07725	0.61	+0.1
1,638,772	-		IAI47_07725	0.61	+0.7
1,638,795	+		IAI47_07725	0.63	-0.0
1,638,795	+		IAI47_07725	0.63	-1.8
1,638,807	+		IAI47_07725	0.63	+1.1
1,638,831	+		IAI47_07725	0.65	-1.1
1,638,831	+		IAI47_07725	0.65	-0.0
1,638,832	-		IAI47_07725	0.65	+0.7
1,638,854	+		IAI47_07725	0.67	+0.3
1,638,855	-		IAI47_07725	0.67	+1.0
1,638,855	-		IAI47_07725	0.67	+0.6
1,638,855	-		IAI47_07725	0.67	-1.0
1,638,873	+		IAI47_07725	0.68	-1.5
1,638,873	+		IAI47_07725	0.68	-0.5
1,638,873	+		IAI47_07725	0.68	+0.7
1,638,873	+		IAI47_07725	0.68	+1.3
1,638,873	+		IAI47_07725	0.68	-0.8
1,638,874	-		IAI47_07725	0.68	+0.3
1,638,874	-		IAI47_07725	0.68	+0.4
1,638,891	+		IAI47_07725	0.69	+0.3
1,638,906	+		IAI47_07725	0.70	+0.1
1,638,907	-		IAI47_07725	0.70	-1.6
1,638,954	+		IAI47_07725	0.73	+0.9
1,638,955	-		IAI47_07725	0.73	-1.3
1,639,049	+		IAI47_07725	0.79	-0.7
1,639,049	+		IAI47_07725	0.79	+0.5
1,639,050	-		IAI47_07725	0.79	-1.3
1,639,050	-		IAI47_07725	0.79	-0.5
1,639,062	+		IAI47_07725	0.80	-1.3
1,639,112	+		IAI47_07725	0.83	+0.9
1,639,112	+		IAI47_07725	0.83	+3.3
1,639,113	-		IAI47_07725	0.83	+0.3
1,639,113	-		IAI47_07725	0.83	-1.6
1,639,113	-		IAI47_07725	0.83	+0.2
1,639,114	+		IAI47_07725	0.83	+0.0
1,639,114	+		IAI47_07725	0.83	+0.7
1,639,114	+		IAI47_07725	0.83	+1.0
1,639,114	+		IAI47_07725	0.83	+0.9
1,639,115	-		IAI47_07725	0.83	+0.6
1,639,182	+		IAI47_07725	0.88	-0.8
1,639,194	+		IAI47_07725	0.89	-0.5
1,639,194	+		IAI47_07725	0.89	-0.3
1,639,195	-		IAI47_07725	0.89	-0.3
1,639,195	-		IAI47_07725	0.89	+0.2
1,639,204	-		IAI47_07725	0.89	+0.5
1,639,204	-		IAI47_07725	0.89	+0.1
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