Strain Fitness in Pantoea sp. MT58 around IAI47_07650

Experiment: Ying_Others16 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 1
1,619,187	+				+0.9
1,619,187	+				-0.1
1,619,188	-				+0.8
1,619,188	-				-0.0
1,619,188	-				+1.1
1,619,196	+				-0.2
1,619,196	+				-1.4
1,619,257	+				-0.2
1,619,285	-				-0.5
1,619,285	-				+0.8
1,619,285	-				+1.5
1,619,285	-				+1.0
1,619,286	+				+1.4
1,619,287	-				-2.8
1,619,313	-				-1.7
1,619,317	+				-1.4
1,619,318	-				-0.4
1,619,327	+				+1.2
1,619,327	+				+0.5
1,619,327	+				+2.6
1,619,328	-				+0.1
1,619,328	-				+0.3
1,619,329	+				-0.6
1,619,329	+				+0.5
1,619,329	+				+0.8
1,619,330	-				-0.9
1,619,330	-				-1.2
1,619,358	-				-0.2
1,619,398	+				+0.8
1,619,398	+				-0.8
1,619,398	+				+0.2
1,619,398	+				-0.1
1,619,398	+				+0.0
1,619,398	+				+1.1
1,619,398	+				-0.6
1,619,398	+				-0.2
1,619,399	-				+0.8
1,619,399	-				-1.7
1,619,399	-				-3.1
1,619,554	+		IAI47_07645	0.30	-1.2
1,619,554	+		IAI47_07645	0.30	-1.6
1,619,555	-		IAI47_07645	0.31	+0.9
1,619,565	-		IAI47_07645	0.33	+0.2
1,619,565	-		IAI47_07645	0.33	-0.2
1,619,565	-		IAI47_07645	0.33	+1.8
1,619,578	+		IAI47_07645	0.35	-0.2
1,619,578	+		IAI47_07645	0.35	+2.3
1,619,578	+		IAI47_07645	0.35	+0.2
1,619,579	-		IAI47_07645	0.35	+0.5
1,619,579	-		IAI47_07645	0.35	+0.8
1,619,579	-				-0.8
1,619,579	-		IAI47_07645	0.35	-1.6
1,619,593	+		IAI47_07645	0.38	+0.6
1,619,653	+		IAI47_07645	0.50	-0.4
1,619,653	+		IAI47_07645	0.50	+1.1
1,619,654	-		IAI47_07645	0.50	+2.0
1,619,654	-		IAI47_07645	0.50	+0.2
1,619,654	-		IAI47_07645	0.50	-1.2
1,619,720	+		IAI47_07645	0.63	+0.8
1,619,726	+		IAI47_07645	0.64	+0.2
1,619,726	+		IAI47_07645	0.64	-1.6
1,619,726	+		IAI47_07645	0.64	+0.5
1,619,726	+		IAI47_07645	0.64	-1.2
1,619,726	+		IAI47_07645	0.64	+1.6
1,619,726	+		IAI47_07645	0.64	-0.8
1,619,726	+		IAI47_07645	0.64	-1.6
1,619,726	+		IAI47_07645	0.64	-1.1
1,619,726	+		IAI47_07645	0.64	-1.8
1,619,727	-		IAI47_07645	0.64	-0.0
1,619,727	-		IAI47_07645	0.64	+1.3
1,619,727	-		IAI47_07645	0.64	+0.2
1,619,727	-		IAI47_07645	0.64	+0.8
1,619,741	-		IAI47_07645	0.67	+0.0
1,619,762	+		IAI47_07645	0.71	+1.0
1,619,763	-		IAI47_07645	0.71	+0.6
1,619,763	-		IAI47_07645	0.71	+0.3
1,619,809	+		IAI47_07645	0.80	-0.8
1,619,810	-		IAI47_07645	0.81	+0.5
1,619,810	-		IAI47_07645	0.81	+0.9
1,619,810	-		IAI47_07645	0.81	+1.5
1,619,813	+		IAI47_07645	0.81	-1.6
1,619,813	+		IAI47_07645	0.81	-0.8
1,619,813	+		IAI47_07645	0.81	+0.7
1,619,813	+		IAI47_07645	0.81	-0.1
1,619,813	+		IAI47_07645	0.81	-0.5
1,619,814	-		IAI47_07645	0.81	+0.1
1,619,814	-		IAI47_07645	0.81	-1.0
1,619,814	-		IAI47_07645	0.81	+1.3
1,619,814	-		IAI47_07645	0.81	-0.9
1,619,822	+		IAI47_07645	0.83	+0.1
1,619,822	+		IAI47_07645	0.83	+0.6
1,619,822	+		IAI47_07645	0.83	-0.7
1,619,822	+		IAI47_07645	0.83	-1.8
1,619,823	-		IAI47_07645	0.83	-0.2
1,619,823	-		IAI47_07645	0.83	+0.9
1,619,824	+		IAI47_07645	0.83	+0.8
1,619,824	+		IAI47_07645	0.83	-0.8
1,619,825	-		IAI47_07645	0.84	-0.1
1,619,833	+		IAI47_07645	0.85	-1.8
1,619,833	+		IAI47_07645	0.85	+0.5
1,619,833	+		IAI47_07645	0.85	-0.7
1,619,865	+				-0.2
1,619,904	+				+0.1
1,619,904	+				-0.8
1,619,906	+				+0.6
1,619,906	+				-0.1
1,619,906	+				-0.3
1,619,906	+				-0.1
1,619,906	+				-1.7
1,619,907	-				+0.9
1,619,907	-				+1.8
1,619,907	-				+2.1
1,620,006	-				+1.0
1,620,011	+				+0.5
1,620,011	+				-1.8
1,620,011	+				-0.4
1,620,012	-				-0.8
1,620,012	-				-0.5
1,620,012	-				+0.8
1,620,014	-				+0.4
1,620,014	-				-0.6
1,620,022	-				-0.1
1,620,022	-				+0.2
1,620,022	-				+0.1
1,620,046	+				-0.8
1,620,046	+				-1.2
1,620,100	+				+0.0
1,620,101	-				-0.2
1,620,148	-				+0.0
1,620,148	-				-1.8
1,620,172	-				-1.1
1,620,172	-				+0.2
1,620,172	-				-0.2
1,620,172	-				+0.3
1,620,172	-				-0.8
1,620,202	+				+0.4
1,620,202	+				-1.2
1,620,202	+				-0.7
1,620,202	+				+1.6
1,620,203	-				-0.4
1,620,217	+		IAI47_07650	0.13	-0.6
1,620,218	-		IAI47_07650	0.13	+0.8
1,620,218	-		IAI47_07650	0.13	-1.2
1,620,253	+		IAI47_07650	0.21	-1.2
1,620,253	+		IAI47_07650	0.21	+1.3
1,620,254	-		IAI47_07650	0.21	+0.0
1,620,254	-		IAI47_07650	0.21	-0.1
1,620,344	+		IAI47_07650	0.41	-0.8
1,620,344	+		IAI47_07650	0.41	+0.8
1,620,363	+		IAI47_07650	0.45	-0.0
1,620,363	+		IAI47_07650	0.45	+0.3
1,620,363	+		IAI47_07650	0.45	+1.2
1,620,389	+		IAI47_07650	0.51	+0.2
1,620,390	-		IAI47_07650	0.51	+1.0
1,620,390	-		IAI47_07650	0.51	+0.8
1,620,390	-		IAI47_07650	0.51	+0.0
1,620,390	-		IAI47_07650	0.51	+0.5
1,620,390	-		IAI47_07650	0.51	+0.3
1,620,390	-		IAI47_07650	0.51	+0.5
1,620,501	+		IAI47_07650	0.76	+0.1
1,620,542	+		IAI47_07650	0.85	-0.9
1,620,543	-		IAI47_07650	0.85	-0.4
1,620,605	+				+0.2
1,620,605	+				-0.7
1,620,606	-				+0.0
1,620,606	-				-0.4
1,620,606	-				+0.8
1,620,606	-				+0.0
1,620,649	+				-0.1
1,620,649	+				-0.5
1,620,706	+				-2.6
1,620,706	+				+1.0
1,620,815	-				-0.8
1,620,934	+		IAI47_07655	0.15	-1.8
1,620,935	-		IAI47_07655	0.15	+0.3
1,620,935	-		IAI47_07655	0.15	+0.2
1,620,987	+		IAI47_07655	0.18	-1.2
1,621,096	+		IAI47_07655	0.23	+1.5
1,621,097	-		IAI47_07655	0.23	-0.6
1,621,121	+		IAI47_07655	0.24	+0.2
1,621,122	-		IAI47_07655	0.24	-0.1
1,621,122	-		IAI47_07655	0.24	-0.0
1,621,135	+		IAI47_07655	0.25	+0.2
1,621,136	-		IAI47_07655	0.25	+0.5
1,621,136	-		IAI47_07655	0.25	-0.8
1,621,149	+		IAI47_07655	0.26	+0.5
1,621,149	+		IAI47_07655	0.26	+1.0
1,621,149	+		IAI47_07655	0.26	-0.4
1,621,149	+		IAI47_07655	0.26	-2.1
1,621,150	-		IAI47_07655	0.26	+1.2
1,621,216	+		IAI47_07655	0.29	-0.5
1,621,216	+		IAI47_07655	0.29	+0.0
1,621,217	-		IAI47_07655	0.29	-1.1
1,621,217	-		IAI47_07655	0.29	+0.9
1,621,226	+		IAI47_07655	0.29	-0.1
1,621,227	-		IAI47_07655	0.29	-0.2
1,621,227	-		IAI47_07655	0.29	-0.9
1,621,259	+		IAI47_07655	0.31	+0.5
1,621,259	+		IAI47_07655	0.31	-0.8
1,621,259	+		IAI47_07655	0.31	-1.7
1,621,259	+		IAI47_07655	0.31	+0.1
1,621,260	-		IAI47_07655	0.31	-1.0
1,621,260	-		IAI47_07655	0.31	-0.1
1,621,283	+		IAI47_07655	0.32	-0.1
1,621,283	+		IAI47_07655	0.32	+0.7
1,621,283	+		IAI47_07655	0.32	+1.0
1,621,283	+		IAI47_07655	0.32	+0.0
1,621,339	+		IAI47_07655	0.35	+0.6
1,621,340	-		IAI47_07655	0.35	+0.6
1,621,363	-		IAI47_07655	0.36	+1.0
1,621,442	+		IAI47_07655	0.40	+0.8
1,621,442	+		IAI47_07655	0.40	-0.6
1,621,442	+		IAI47_07655	0.40	+0.0
1,621,442	+		IAI47_07655	0.40	-0.2
1,621,442	+		IAI47_07655	0.40	+2.5
1,621,442	+		IAI47_07655	0.40	+0.8
1,621,442	+		IAI47_07655	0.40	-0.2
1,621,443	-		IAI47_07655	0.40	+1.6
1,621,487	-		IAI47_07655	0.42	-0.1
1,621,577	-		IAI47_07655	0.46	-0.2