Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02465

Experiment: D-Tagatose (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02464 and MPMX20_02465 are separated by 28 nucleotidesMPMX20_02465 and MPMX20_02466 overlap by 14 nucleotidesMPMX20_02466 and MPMX20_02467 are separated by 22 nucleotides MPMX20_02464: MPMX20_02464 - L-threonine 3-dehydrogenase, at 2,605,201 to 2,606,253 _02464 MPMX20_02465: MPMX20_02465 - Inner membrane ABC transporter permease protein YcjP, at 2,606,282 to 2,607,124 _02465 MPMX20_02466: MPMX20_02466 - Inner membrane ABC transporter permease protein YcjO, at 2,607,111 to 2,607,992 _02466 MPMX20_02467: MPMX20_02467 - hypothetical protein, at 2,608,015 to 2,609,307 _02467 Position (kb) 2606 2607 2608Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2605.282 kb on + strandat 2605.287 kb on + strandat 2605.297 kb on + strandat 2605.312 kb on + strand, within MPMX20_02464at 2605.320 kb on - strand, within MPMX20_02464at 2605.343 kb on - strand, within MPMX20_02464at 2605.453 kb on + strand, within MPMX20_02464at 2605.524 kb on + strand, within MPMX20_02464at 2605.524 kb on + strand, within MPMX20_02464at 2605.582 kb on - strand, within MPMX20_02464at 2605.611 kb on - strand, within MPMX20_02464at 2605.611 kb on - strand, within MPMX20_02464at 2605.622 kb on - strand, within MPMX20_02464at 2605.629 kb on + strand, within MPMX20_02464at 2605.694 kb on - strand, within MPMX20_02464at 2605.758 kb on + strand, within MPMX20_02464at 2605.818 kb on - strand, within MPMX20_02464at 2605.818 kb on - strand, within MPMX20_02464at 2605.824 kb on + strand, within MPMX20_02464at 2605.824 kb on + strand, within MPMX20_02464at 2605.926 kb on + strand, within MPMX20_02464at 2605.934 kb on - strand, within MPMX20_02464at 2605.952 kb on + strand, within MPMX20_02464at 2605.962 kb on + strand, within MPMX20_02464at 2606.003 kb on + strand, within MPMX20_02464at 2606.050 kb on + strand, within MPMX20_02464at 2606.069 kb on - strand, within MPMX20_02464at 2606.069 kb on - strand, within MPMX20_02464at 2606.069 kb on - strand, within MPMX20_02464at 2606.081 kb on + strand, within MPMX20_02464at 2606.081 kb on + strand, within MPMX20_02464at 2606.089 kb on - strand, within MPMX20_02464at 2606.142 kb on + strand, within MPMX20_02464at 2606.222 kb on + strandat 2606.225 kb on - strandat 2606.293 kb on - strandat 2606.293 kb on - strandat 2606.325 kb on + strandat 2606.326 kb on + strandat 2606.335 kb on + strandat 2606.404 kb on - strand, within MPMX20_02465at 2606.417 kb on - strand, within MPMX20_02465at 2606.578 kb on + strand, within MPMX20_02465at 2606.586 kb on - strand, within MPMX20_02465at 2606.644 kb on + strand, within MPMX20_02465at 2606.644 kb on + strand, within MPMX20_02465at 2606.644 kb on + strand, within MPMX20_02465at 2606.652 kb on - strand, within MPMX20_02465at 2606.652 kb on - strand, within MPMX20_02465at 2606.652 kb on - strand, within MPMX20_02465at 2606.655 kb on + strand, within MPMX20_02465at 2606.675 kb on - strand, within MPMX20_02465at 2606.679 kb on - strand, within MPMX20_02465at 2606.695 kb on - strand, within MPMX20_02465at 2606.768 kb on + strand, within MPMX20_02465at 2606.768 kb on + strand, within MPMX20_02465at 2606.768 kb on + strand, within MPMX20_02465at 2606.768 kb on + strand, within MPMX20_02465at 2606.768 kb on + strand, within MPMX20_02465at 2606.776 kb on - strand, within MPMX20_02465at 2606.776 kb on - strand, within MPMX20_02465at 2606.776 kb on - strand, within MPMX20_02465at 2606.776 kb on - strand, within MPMX20_02465at 2606.776 kb on - strand, within MPMX20_02465at 2606.846 kb on - strand, within MPMX20_02465at 2606.932 kb on + strand, within MPMX20_02465at 2606.961 kb on + strand, within MPMX20_02465at 2607.014 kb on + strand, within MPMX20_02465at 2607.020 kb on - strand, within MPMX20_02465at 2607.032 kb on - strand, within MPMX20_02465at 2607.050 kb on - strandat 2607.068 kb on - strandat 2607.070 kb on + strandat 2607.082 kb on + strandat 2607.090 kb on - strandat 2607.128 kb on + strandat 2607.204 kb on + strand, within MPMX20_02466at 2607.210 kb on - strand, within MPMX20_02466at 2607.231 kb on + strand, within MPMX20_02466at 2607.233 kb on + strand, within MPMX20_02466at 2607.237 kb on + strand, within MPMX20_02466at 2607.237 kb on - strand, within MPMX20_02466at 2607.241 kb on - strand, within MPMX20_02466at 2607.299 kb on - strand, within MPMX20_02466at 2607.302 kb on + strand, within MPMX20_02466at 2607.317 kb on + strand, within MPMX20_02466at 2607.325 kb on + strand, within MPMX20_02466at 2607.325 kb on - strand, within MPMX20_02466at 2607.326 kb on - strand, within MPMX20_02466at 2607.330 kb on + strand, within MPMX20_02466at 2607.333 kb on - strand, within MPMX20_02466at 2607.341 kb on + strand, within MPMX20_02466at 2607.349 kb on - strand, within MPMX20_02466at 2607.406 kb on + strand, within MPMX20_02466at 2607.500 kb on + strand, within MPMX20_02466at 2607.508 kb on - strand, within MPMX20_02466at 2607.550 kb on - strand, within MPMX20_02466at 2607.560 kb on + strand, within MPMX20_02466at 2607.560 kb on + strand, within MPMX20_02466at 2607.638 kb on + strand, within MPMX20_02466at 2607.646 kb on - strand, within MPMX20_02466at 2607.720 kb on + strand, within MPMX20_02466at 2607.720 kb on + strand, within MPMX20_02466at 2607.720 kb on + strand, within MPMX20_02466at 2607.720 kb on + strand, within MPMX20_02466at 2607.720 kb on + strand, within MPMX20_02466at 2607.720 kb on + strand, within MPMX20_02466at 2607.728 kb on - strand, within MPMX20_02466at 2607.728 kb on - strand, within MPMX20_02466at 2607.728 kb on - strand, within MPMX20_02466at 2607.730 kb on + strand, within MPMX20_02466at 2607.738 kb on - strand, within MPMX20_02466at 2607.738 kb on - strand, within MPMX20_02466at 2607.743 kb on + strand, within MPMX20_02466at 2607.746 kb on - strand, within MPMX20_02466at 2607.747 kb on - strand, within MPMX20_02466at 2607.765 kb on + strand, within MPMX20_02466at 2607.814 kb on + strand, within MPMX20_02466at 2607.814 kb on + strand, within MPMX20_02466at 2607.822 kb on - strand, within MPMX20_02466at 2607.822 kb on - strand, within MPMX20_02466at 2607.838 kb on + strand, within MPMX20_02466at 2607.911 kb on - strandat 2607.960 kb on - strandat 2608.065 kb on - strandat 2608.088 kb on + strandat 2608.096 kb on - strandat 2608.104 kb on + strandat 2608.104 kb on - strandat 2608.109 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (N)
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2,605,282 + -0.2
2,605,287 + -1.2
2,605,297 + +1.0
2,605,312 + MPMX20_02464 0.11 -2.1
2,605,320 - MPMX20_02464 0.11 -3.7
2,605,343 - MPMX20_02464 0.13 -2.9
2,605,453 + MPMX20_02464 0.24 +0.7
2,605,524 + MPMX20_02464 0.31 -0.2
2,605,524 + MPMX20_02464 0.31 -0.4
2,605,582 - MPMX20_02464 0.36 +1.6
2,605,611 - MPMX20_02464 0.39 +0.7
2,605,611 - MPMX20_02464 0.39 +0.2
2,605,622 - MPMX20_02464 0.40 -2.4
2,605,629 + MPMX20_02464 0.41 +0.9
2,605,694 - MPMX20_02464 0.47 +0.3
2,605,758 + MPMX20_02464 0.53 +2.0
2,605,818 - MPMX20_02464 0.59 +0.6
2,605,818 - MPMX20_02464 0.59 -0.3
2,605,824 + MPMX20_02464 0.59 -0.2
2,605,824 + MPMX20_02464 0.59 -2.9
2,605,926 + MPMX20_02464 0.69 +3.2
2,605,934 - MPMX20_02464 0.70 -3.1
2,605,952 + MPMX20_02464 0.71 +2.6
2,605,962 + MPMX20_02464 0.72 +0.3
2,606,003 + MPMX20_02464 0.76 +1.8
2,606,050 + MPMX20_02464 0.81 -0.7
2,606,069 - MPMX20_02464 0.82 -1.4
2,606,069 - MPMX20_02464 0.82 -0.2
2,606,069 - MPMX20_02464 0.82 +0.2
2,606,081 + MPMX20_02464 0.84 -0.8
2,606,081 + MPMX20_02464 0.84 -2.1
2,606,089 - MPMX20_02464 0.84 +2.3
2,606,142 + MPMX20_02464 0.89 +0.2
2,606,222 + -0.9
2,606,225 - -0.2
2,606,293 - -0.8
2,606,293 - +0.5
2,606,325 + -0.6
2,606,326 + -1.4
2,606,335 + -0.8
2,606,404 - MPMX20_02465 0.14 +0.9
2,606,417 - MPMX20_02465 0.16 -1.2
2,606,578 + MPMX20_02465 0.35 +2.7
2,606,586 - MPMX20_02465 0.36 -2.1
2,606,644 + MPMX20_02465 0.43 +0.1
2,606,644 + MPMX20_02465 0.43 +1.3
2,606,644 + MPMX20_02465 0.43 +0.8
2,606,652 - MPMX20_02465 0.44 -2.9
2,606,652 - MPMX20_02465 0.44 -2.1
2,606,652 - MPMX20_02465 0.44 -0.1
2,606,655 + MPMX20_02465 0.44 +0.9
2,606,675 - MPMX20_02465 0.47 -0.8
2,606,679 - MPMX20_02465 0.47 +0.7
2,606,695 - MPMX20_02465 0.49 +2.3
2,606,768 + MPMX20_02465 0.58 +1.5
2,606,768 + MPMX20_02465 0.58 +0.8
2,606,768 + MPMX20_02465 0.58 -1.6
2,606,768 + MPMX20_02465 0.58 +0.8
2,606,768 + MPMX20_02465 0.58 -3.2
2,606,776 - MPMX20_02465 0.59 +0.5
2,606,776 - MPMX20_02465 0.59 +0.9
2,606,776 - MPMX20_02465 0.59 -3.1
2,606,776 - MPMX20_02465 0.59 +2.6
2,606,776 - MPMX20_02465 0.59 +0.4
2,606,846 - MPMX20_02465 0.67 +2.3
2,606,932 + MPMX20_02465 0.77 -1.9
2,606,961 + MPMX20_02465 0.81 -0.6
2,607,014 + MPMX20_02465 0.87 +0.6
2,607,020 - MPMX20_02465 0.88 -3.1
2,607,032 - MPMX20_02465 0.89 +0.3
2,607,050 - -2.3
2,607,068 - -0.9
2,607,070 + +2.6
2,607,082 + +0.1
2,607,090 - +1.8
2,607,128 + -0.6
2,607,204 + MPMX20_02466 0.11 +0.4
2,607,210 - MPMX20_02466 0.11 +0.2
2,607,231 + MPMX20_02466 0.14 +2.0
2,607,233 + MPMX20_02466 0.14 -0.5
2,607,237 + MPMX20_02466 0.14 -1.0
2,607,237 - MPMX20_02466 0.14 +1.7
2,607,241 - MPMX20_02466 0.15 +0.8
2,607,299 - MPMX20_02466 0.21 -1.5
2,607,302 + MPMX20_02466 0.22 -1.8
2,607,317 + MPMX20_02466 0.23 -0.7
2,607,325 + MPMX20_02466 0.24 -2.9
2,607,325 - MPMX20_02466 0.24 +0.8
2,607,326 - MPMX20_02466 0.24 -2.4
2,607,330 + MPMX20_02466 0.25 -0.4
2,607,333 - MPMX20_02466 0.25 -0.2
2,607,341 + MPMX20_02466 0.26 -2.3
2,607,349 - MPMX20_02466 0.27 +2.0
2,607,406 + MPMX20_02466 0.33 +0.5
2,607,500 + MPMX20_02466 0.44 +0.5
2,607,508 - MPMX20_02466 0.45 -1.4
2,607,550 - MPMX20_02466 0.50 +0.0
2,607,560 + MPMX20_02466 0.51 -1.0
2,607,560 + MPMX20_02466 0.51 +0.2
2,607,638 + MPMX20_02466 0.60 +0.6
2,607,646 - MPMX20_02466 0.61 -0.0
2,607,720 + MPMX20_02466 0.69 -0.6
2,607,720 + MPMX20_02466 0.69 +0.3
2,607,720 + MPMX20_02466 0.69 -0.8
2,607,720 + MPMX20_02466 0.69 -1.3
2,607,720 + MPMX20_02466 0.69 -0.7
2,607,720 + MPMX20_02466 0.69 +0.1
2,607,728 - MPMX20_02466 0.70 -3.4
2,607,728 - MPMX20_02466 0.70 +1.6
2,607,728 - MPMX20_02466 0.70 -0.7
2,607,730 + MPMX20_02466 0.70 -2.0
2,607,738 - MPMX20_02466 0.71 -0.7
2,607,738 - MPMX20_02466 0.71 +0.6
2,607,743 + MPMX20_02466 0.72 -0.8
2,607,746 - MPMX20_02466 0.72 -0.8
2,607,747 - MPMX20_02466 0.72 -2.3
2,607,765 + MPMX20_02466 0.74 -2.1
2,607,814 + MPMX20_02466 0.80 -2.0
2,607,814 + MPMX20_02466 0.80 +0.3
2,607,822 - MPMX20_02466 0.81 -1.1
2,607,822 - MPMX20_02466 0.81 -0.8
2,607,838 + MPMX20_02466 0.82 -0.3
2,607,911 - -2.2
2,607,960 - +1.1
2,608,065 - -3.0
2,608,088 + +0.3
2,608,096 - +1.0
2,608,104 + +3.6
2,608,104 - +1.9
2,608,109 + +1.1

Or see this region's nucleotide sequence