Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01466

Experiment: D-Tagatose (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01464 and MPMX20_01465 are separated by 128 nucleotidesMPMX20_01465 and MPMX20_01466 are separated by 40 nucleotidesMPMX20_01466 and MPMX20_01467 are separated by 1 nucleotides MPMX20_01464: MPMX20_01464 - Choline trimethylamine-lyase activating enzyme, at 1,533,825 to 1,534,724 _01464 MPMX20_01465: MPMX20_01465 - Fructose-6-phosphate aldolase 1, at 1,534,853 to 1,535,515 _01465 MPMX20_01466: MPMX20_01466 - Molybdopterin-synthase adenylyltransferase, at 1,535,556 to 1,536,308 _01466 MPMX20_01467: MPMX20_01467 - Molybdopterin molybdenumtransferase, at 1,536,310 to 1,537,542 _01467 Position (kb) 1535 1536 1537Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1534.556 kb on + strand, within MPMX20_01464at 1534.657 kb on + strandat 1534.699 kb on + strandat 1534.699 kb on + strandat 1534.704 kb on + strandat 1534.707 kb on - strandat 1534.709 kb on + strandat 1534.805 kb on + strandat 1534.820 kb on + strandat 1534.922 kb on + strand, within MPMX20_01465at 1534.936 kb on + strand, within MPMX20_01465at 1535.029 kb on + strand, within MPMX20_01465at 1535.037 kb on - strand, within MPMX20_01465at 1535.037 kb on - strand, within MPMX20_01465at 1535.146 kb on + strand, within MPMX20_01465at 1535.173 kb on + strand, within MPMX20_01465at 1535.183 kb on + strand, within MPMX20_01465at 1535.183 kb on - strand, within MPMX20_01465at 1535.190 kb on + strand, within MPMX20_01465at 1535.193 kb on - strand, within MPMX20_01465at 1535.193 kb on - strand, within MPMX20_01465at 1535.195 kb on + strand, within MPMX20_01465at 1535.198 kb on + strand, within MPMX20_01465at 1535.331 kb on + strand, within MPMX20_01465at 1535.479 kb on + strandat 1535.484 kb on + strandat 1535.487 kb on - strandat 1535.570 kb on + strandat 1535.578 kb on - strandat 1535.615 kb on - strandat 1535.705 kb on + strand, within MPMX20_01466at 1535.746 kb on - strand, within MPMX20_01466at 1535.748 kb on + strand, within MPMX20_01466at 1535.748 kb on + strand, within MPMX20_01466at 1535.920 kb on + strand, within MPMX20_01466at 1535.983 kb on + strand, within MPMX20_01466at 1536.029 kb on - strand, within MPMX20_01466at 1536.034 kb on - strand, within MPMX20_01466at 1536.065 kb on - strand, within MPMX20_01466at 1536.072 kb on + strand, within MPMX20_01466at 1536.154 kb on + strand, within MPMX20_01466at 1536.180 kb on - strand, within MPMX20_01466at 1536.184 kb on + strand, within MPMX20_01466at 1536.259 kb on + strandat 1536.302 kb on - strandat 1536.327 kb on + strandat 1536.335 kb on - strandat 1536.360 kb on + strandat 1536.368 kb on - strandat 1536.398 kb on + strandat 1536.438 kb on + strand, within MPMX20_01467at 1536.449 kb on - strand, within MPMX20_01467at 1536.521 kb on + strand, within MPMX20_01467at 1536.620 kb on - strand, within MPMX20_01467at 1536.622 kb on + strand, within MPMX20_01467at 1536.630 kb on - strand, within MPMX20_01467at 1536.630 kb on - strand, within MPMX20_01467at 1536.639 kb on + strand, within MPMX20_01467at 1536.670 kb on + strand, within MPMX20_01467at 1536.725 kb on - strand, within MPMX20_01467at 1536.743 kb on - strand, within MPMX20_01467at 1536.823 kb on - strand, within MPMX20_01467at 1536.890 kb on + strand, within MPMX20_01467at 1536.890 kb on + strand, within MPMX20_01467at 1536.893 kb on - strand, within MPMX20_01467at 1536.898 kb on - strand, within MPMX20_01467at 1536.898 kb on - strand, within MPMX20_01467at 1536.898 kb on - strand, within MPMX20_01467at 1536.900 kb on - strand, within MPMX20_01467at 1536.912 kb on + strand, within MPMX20_01467at 1537.176 kb on - strand, within MPMX20_01467

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (N)
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1,534,556 + MPMX20_01464 0.81 -0.3
1,534,657 + -2.9
1,534,699 + +0.3
1,534,699 + -0.3
1,534,704 + +1.7
1,534,707 - +0.6
1,534,709 + -1.0
1,534,805 + -0.4
1,534,820 + +0.4
1,534,922 + MPMX20_01465 0.10 -0.9
1,534,936 + MPMX20_01465 0.13 -2.7
1,535,029 + MPMX20_01465 0.27 +1.4
1,535,037 - MPMX20_01465 0.28 -0.4
1,535,037 - MPMX20_01465 0.28 -0.8
1,535,146 + MPMX20_01465 0.44 +0.4
1,535,173 + MPMX20_01465 0.48 -3.3
1,535,183 + MPMX20_01465 0.50 +0.5
1,535,183 - MPMX20_01465 0.50 -1.7
1,535,190 + MPMX20_01465 0.51 -1.1
1,535,193 - MPMX20_01465 0.51 +1.8
1,535,193 - MPMX20_01465 0.51 +2.2
1,535,195 + MPMX20_01465 0.52 +0.4
1,535,198 + MPMX20_01465 0.52 -0.1
1,535,331 + MPMX20_01465 0.72 -4.0
1,535,479 + -0.8
1,535,484 + -3.0
1,535,487 - +0.8
1,535,570 + -1.2
1,535,578 - +0.5
1,535,615 - -0.3
1,535,705 + MPMX20_01466 0.20 +1.0
1,535,746 - MPMX20_01466 0.25 -0.1
1,535,748 + MPMX20_01466 0.25 -2.3
1,535,748 + MPMX20_01466 0.25 -2.2
1,535,920 + MPMX20_01466 0.48 -2.8
1,535,983 + MPMX20_01466 0.57 -1.2
1,536,029 - MPMX20_01466 0.63 -0.2
1,536,034 - MPMX20_01466 0.63 -3.0
1,536,065 - MPMX20_01466 0.68 -0.7
1,536,072 + MPMX20_01466 0.69 +0.2
1,536,154 + MPMX20_01466 0.79 -1.6
1,536,180 - MPMX20_01466 0.83 -3.6
1,536,184 + MPMX20_01466 0.83 +1.8
1,536,259 + +0.5
1,536,302 - +0.3
1,536,327 + +1.4
1,536,335 - -1.1
1,536,360 + -3.9
1,536,368 - -1.3
1,536,398 + -0.6
1,536,438 + MPMX20_01467 0.10 -0.7
1,536,449 - MPMX20_01467 0.11 +1.5
1,536,521 + MPMX20_01467 0.17 -3.0
1,536,620 - MPMX20_01467 0.25 -0.0
1,536,622 + MPMX20_01467 0.25 -3.2
1,536,630 - MPMX20_01467 0.26 +1.0
1,536,630 - MPMX20_01467 0.26 -1.9
1,536,639 + MPMX20_01467 0.27 -0.1
1,536,670 + MPMX20_01467 0.29 +0.8
1,536,725 - MPMX20_01467 0.34 -0.6
1,536,743 - MPMX20_01467 0.35 +0.9
1,536,823 - MPMX20_01467 0.42 -1.4
1,536,890 + MPMX20_01467 0.47 +0.7
1,536,890 + MPMX20_01467 0.47 -0.8
1,536,893 - MPMX20_01467 0.47 -2.3
1,536,898 - MPMX20_01467 0.48 -1.4
1,536,898 - MPMX20_01467 0.48 -1.5
1,536,898 - MPMX20_01467 0.48 +0.2
1,536,900 - MPMX20_01467 0.48 -3.4
1,536,912 + MPMX20_01467 0.49 -2.1
1,537,176 - MPMX20_01467 0.70 -2.3

Or see this region's nucleotide sequence