Experiment: D-Tagatose (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01464 and MPMX20_01465 are separated by 128 nucleotides MPMX20_01465 and MPMX20_01466 are separated by 40 nucleotides MPMX20_01466 and MPMX20_01467 are separated by 1 nucleotides
MPMX20_01464: MPMX20_01464 - Choline trimethylamine-lyase activating enzyme, at 1,533,825 to 1,534,724
_01464
MPMX20_01465: MPMX20_01465 - Fructose-6-phosphate aldolase 1, at 1,534,853 to 1,535,515
_01465
MPMX20_01466: MPMX20_01466 - Molybdopterin-synthase adenylyltransferase, at 1,535,556 to 1,536,308
_01466
MPMX20_01467: MPMX20_01467 - Molybdopterin molybdenumtransferase, at 1,536,310 to 1,537,542
_01467
Position (kb)
1535
1536
1537 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1534.556 kb on + strand, within MPMX20_01464 at 1534.657 kb on + strand at 1534.699 kb on + strand at 1534.699 kb on + strand at 1534.704 kb on + strand at 1534.707 kb on - strand at 1534.709 kb on + strand at 1534.805 kb on + strand at 1534.820 kb on + strand at 1534.922 kb on + strand, within MPMX20_01465 at 1534.936 kb on + strand, within MPMX20_01465 at 1535.029 kb on + strand, within MPMX20_01465 at 1535.037 kb on - strand, within MPMX20_01465 at 1535.037 kb on - strand, within MPMX20_01465 at 1535.146 kb on + strand, within MPMX20_01465 at 1535.173 kb on + strand, within MPMX20_01465 at 1535.183 kb on + strand, within MPMX20_01465 at 1535.183 kb on - strand, within MPMX20_01465 at 1535.190 kb on + strand, within MPMX20_01465 at 1535.193 kb on - strand, within MPMX20_01465 at 1535.193 kb on - strand, within MPMX20_01465 at 1535.195 kb on + strand, within MPMX20_01465 at 1535.198 kb on + strand, within MPMX20_01465 at 1535.331 kb on + strand, within MPMX20_01465 at 1535.479 kb on + strand at 1535.484 kb on + strand at 1535.487 kb on - strand at 1535.570 kb on + strand at 1535.578 kb on - strand at 1535.615 kb on - strand at 1535.705 kb on + strand, within MPMX20_01466 at 1535.746 kb on - strand, within MPMX20_01466 at 1535.748 kb on + strand, within MPMX20_01466 at 1535.748 kb on + strand, within MPMX20_01466 at 1535.920 kb on + strand, within MPMX20_01466 at 1535.983 kb on + strand, within MPMX20_01466 at 1536.029 kb on - strand, within MPMX20_01466 at 1536.034 kb on - strand, within MPMX20_01466 at 1536.065 kb on - strand, within MPMX20_01466 at 1536.072 kb on + strand, within MPMX20_01466 at 1536.154 kb on + strand, within MPMX20_01466 at 1536.180 kb on - strand, within MPMX20_01466 at 1536.184 kb on + strand, within MPMX20_01466 at 1536.259 kb on + strand at 1536.302 kb on - strand at 1536.327 kb on + strand at 1536.335 kb on - strand at 1536.360 kb on + strand at 1536.368 kb on - strand at 1536.398 kb on + strand at 1536.438 kb on + strand, within MPMX20_01467 at 1536.449 kb on - strand, within MPMX20_01467 at 1536.521 kb on + strand, within MPMX20_01467 at 1536.620 kb on - strand, within MPMX20_01467 at 1536.622 kb on + strand, within MPMX20_01467 at 1536.630 kb on - strand, within MPMX20_01467 at 1536.630 kb on - strand, within MPMX20_01467 at 1536.639 kb on + strand, within MPMX20_01467 at 1536.670 kb on + strand, within MPMX20_01467 at 1536.725 kb on - strand, within MPMX20_01467 at 1536.743 kb on - strand, within MPMX20_01467 at 1536.823 kb on - strand, within MPMX20_01467 at 1536.890 kb on + strand, within MPMX20_01467 at 1536.890 kb on + strand, within MPMX20_01467 at 1536.893 kb on - strand, within MPMX20_01467 at 1536.898 kb on - strand, within MPMX20_01467 at 1536.898 kb on - strand, within MPMX20_01467 at 1536.898 kb on - strand, within MPMX20_01467 at 1536.900 kb on - strand, within MPMX20_01467 at 1536.912 kb on + strand, within MPMX20_01467 at 1537.176 kb on - strand, within MPMX20_01467
Per-strain Table
Position Strand Gene LocusTag Fraction D-Tagatose (N) remove 1,534,556 + MPMX20_01464 0.81 -0.3 1,534,657 + -2.9 1,534,699 + +0.3 1,534,699 + -0.3 1,534,704 + +1.7 1,534,707 - +0.6 1,534,709 + -1.0 1,534,805 + -0.4 1,534,820 + +0.4 1,534,922 + MPMX20_01465 0.10 -0.9 1,534,936 + MPMX20_01465 0.13 -2.7 1,535,029 + MPMX20_01465 0.27 +1.4 1,535,037 - MPMX20_01465 0.28 -0.4 1,535,037 - MPMX20_01465 0.28 -0.8 1,535,146 + MPMX20_01465 0.44 +0.4 1,535,173 + MPMX20_01465 0.48 -3.3 1,535,183 + MPMX20_01465 0.50 +0.5 1,535,183 - MPMX20_01465 0.50 -1.7 1,535,190 + MPMX20_01465 0.51 -1.1 1,535,193 - MPMX20_01465 0.51 +1.8 1,535,193 - MPMX20_01465 0.51 +2.2 1,535,195 + MPMX20_01465 0.52 +0.4 1,535,198 + MPMX20_01465 0.52 -0.1 1,535,331 + MPMX20_01465 0.72 -4.0 1,535,479 + -0.8 1,535,484 + -3.0 1,535,487 - +0.8 1,535,570 + -1.2 1,535,578 - +0.5 1,535,615 - -0.3 1,535,705 + MPMX20_01466 0.20 +1.0 1,535,746 - MPMX20_01466 0.25 -0.1 1,535,748 + MPMX20_01466 0.25 -2.3 1,535,748 + MPMX20_01466 0.25 -2.2 1,535,920 + MPMX20_01466 0.48 -2.8 1,535,983 + MPMX20_01466 0.57 -1.2 1,536,029 - MPMX20_01466 0.63 -0.2 1,536,034 - MPMX20_01466 0.63 -3.0 1,536,065 - MPMX20_01466 0.68 -0.7 1,536,072 + MPMX20_01466 0.69 +0.2 1,536,154 + MPMX20_01466 0.79 -1.6 1,536,180 - MPMX20_01466 0.83 -3.6 1,536,184 + MPMX20_01466 0.83 +1.8 1,536,259 + +0.5 1,536,302 - +0.3 1,536,327 + +1.4 1,536,335 - -1.1 1,536,360 + -3.9 1,536,368 - -1.3 1,536,398 + -0.6 1,536,438 + MPMX20_01467 0.10 -0.7 1,536,449 - MPMX20_01467 0.11 +1.5 1,536,521 + MPMX20_01467 0.17 -3.0 1,536,620 - MPMX20_01467 0.25 -0.0 1,536,622 + MPMX20_01467 0.25 -3.2 1,536,630 - MPMX20_01467 0.26 +1.0 1,536,630 - MPMX20_01467 0.26 -1.9 1,536,639 + MPMX20_01467 0.27 -0.1 1,536,670 + MPMX20_01467 0.29 +0.8 1,536,725 - MPMX20_01467 0.34 -0.6 1,536,743 - MPMX20_01467 0.35 +0.9 1,536,823 - MPMX20_01467 0.42 -1.4 1,536,890 + MPMX20_01467 0.47 +0.7 1,536,890 + MPMX20_01467 0.47 -0.8 1,536,893 - MPMX20_01467 0.47 -2.3 1,536,898 - MPMX20_01467 0.48 -1.4 1,536,898 - MPMX20_01467 0.48 -1.5 1,536,898 - MPMX20_01467 0.48 +0.2 1,536,900 - MPMX20_01467 0.48 -3.4 1,536,912 + MPMX20_01467 0.49 -2.1 1,537,176 - MPMX20_01467 0.70 -2.3
Or see this region's nucleotide sequence