Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00917

Experiment: D-Tagatose (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00915 and MPMX20_00916 overlap by 8 nucleotidesMPMX20_00916 and MPMX20_00917 overlap by 8 nucleotidesMPMX20_00917 and MPMX20_00918 are separated by 6 nucleotidesMPMX20_00918 and MPMX20_00919 are separated by 10 nucleotides MPMX20_00915: MPMX20_00915 - Na(+)-translocating NADH-quinone reductase subunit B, at 964,454 to 965,689 _00915 MPMX20_00916: MPMX20_00916 - Na(+)-translocating NADH-quinone reductase subunit C, at 965,682 to 966,476 _00916 MPMX20_00917: MPMX20_00917 - Na(+)-translocating NADH-quinone reductase subunit D, at 966,469 to 967,107 _00917 MPMX20_00918: MPMX20_00918 - Na(+)-translocating NADH-quinone reductase subunit E, at 967,114 to 967,710 _00918 MPMX20_00919: MPMX20_00919 - Na(+)-translocating NADH-quinone reductase subunit F, at 967,721 to 968,944 _00919 Position (kb) 966 967 968Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 965.524 kb on - strand, within MPMX20_00915at 965.555 kb on + strand, within MPMX20_00915at 965.578 kb on + strandat 965.591 kb on + strandat 965.661 kb on + strandat 965.782 kb on + strand, within MPMX20_00916at 965.805 kb on - strand, within MPMX20_00916at 965.816 kb on + strand, within MPMX20_00916at 965.872 kb on - strand, within MPMX20_00916at 965.872 kb on - strand, within MPMX20_00916at 965.875 kb on - strand, within MPMX20_00916at 965.877 kb on - strand, within MPMX20_00916at 965.881 kb on + strand, within MPMX20_00916at 965.913 kb on + strand, within MPMX20_00916at 965.997 kb on - strand, within MPMX20_00916at 966.006 kb on + strand, within MPMX20_00916at 966.054 kb on - strand, within MPMX20_00916at 966.149 kb on - strand, within MPMX20_00916at 966.149 kb on - strand, within MPMX20_00916at 966.149 kb on - strand, within MPMX20_00916at 966.156 kb on - strand, within MPMX20_00916at 966.156 kb on - strand, within MPMX20_00916at 966.187 kb on + strand, within MPMX20_00916at 966.188 kb on - strand, within MPMX20_00916at 966.196 kb on + strand, within MPMX20_00916at 966.214 kb on + strand, within MPMX20_00916at 966.226 kb on + strand, within MPMX20_00916at 966.276 kb on + strand, within MPMX20_00916at 966.309 kb on - strand, within MPMX20_00916at 966.359 kb on + strand, within MPMX20_00916at 966.385 kb on + strand, within MPMX20_00916at 966.414 kb on + strandat 966.542 kb on - strand, within MPMX20_00917at 966.542 kb on - strand, within MPMX20_00917at 966.550 kb on - strand, within MPMX20_00917at 966.557 kb on - strand, within MPMX20_00917at 966.557 kb on - strand, within MPMX20_00917at 966.603 kb on + strand, within MPMX20_00917at 966.603 kb on + strand, within MPMX20_00917at 966.611 kb on - strand, within MPMX20_00917at 966.611 kb on - strand, within MPMX20_00917at 966.611 kb on - strand, within MPMX20_00917at 966.611 kb on - strand, within MPMX20_00917at 966.611 kb on - strand, within MPMX20_00917at 966.627 kb on + strand, within MPMX20_00917at 966.683 kb on + strand, within MPMX20_00917at 966.910 kb on - strand, within MPMX20_00917at 966.910 kb on - strand, within MPMX20_00917at 966.910 kb on - strand, within MPMX20_00917at 966.972 kb on + strand, within MPMX20_00917at 966.978 kb on - strand, within MPMX20_00917at 966.978 kb on - strand, within MPMX20_00917at 966.982 kb on + strand, within MPMX20_00917at 967.067 kb on - strandat 967.082 kb on + strandat 967.090 kb on - strandat 967.090 kb on - strandat 967.090 kb on - strandat 967.141 kb on + strandat 967.234 kb on - strand, within MPMX20_00918at 967.295 kb on + strand, within MPMX20_00918at 967.296 kb on - strand, within MPMX20_00918at 967.320 kb on + strand, within MPMX20_00918at 967.320 kb on + strand, within MPMX20_00918at 967.320 kb on + strand, within MPMX20_00918at 967.391 kb on + strand, within MPMX20_00918at 967.392 kb on - strand, within MPMX20_00918at 967.428 kb on + strand, within MPMX20_00918at 967.628 kb on - strand, within MPMX20_00918at 967.637 kb on + strand, within MPMX20_00918at 967.637 kb on + strand, within MPMX20_00918at 967.637 kb on + strand, within MPMX20_00918at 967.645 kb on - strand, within MPMX20_00918at 967.656 kb on - strandat 967.704 kb on + strandat 967.712 kb on - strandat 967.746 kb on + strandat 967.778 kb on - strandat 967.926 kb on + strand, within MPMX20_00919at 967.949 kb on - strand, within MPMX20_00919at 967.975 kb on + strand, within MPMX20_00919at 968.027 kb on + strand, within MPMX20_00919at 968.032 kb on + strand, within MPMX20_00919at 968.039 kb on + strand, within MPMX20_00919

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (N)
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965,524 - MPMX20_00915 0.87 +0.8
965,555 + MPMX20_00915 0.89 -0.7
965,578 + +0.2
965,591 + -3.0
965,661 + +1.9
965,782 + MPMX20_00916 0.13 -0.9
965,805 - MPMX20_00916 0.15 +1.0
965,816 + MPMX20_00916 0.17 +0.9
965,872 - MPMX20_00916 0.24 -1.2
965,872 - MPMX20_00916 0.24 -1.2
965,875 - MPMX20_00916 0.24 +0.1
965,877 - MPMX20_00916 0.25 +0.2
965,881 + MPMX20_00916 0.25 -1.3
965,913 + MPMX20_00916 0.29 +3.4
965,997 - MPMX20_00916 0.40 -1.9
966,006 + MPMX20_00916 0.41 -0.9
966,054 - MPMX20_00916 0.47 -1.6
966,149 - MPMX20_00916 0.59 -1.1
966,149 - MPMX20_00916 0.59 -0.2
966,149 - MPMX20_00916 0.59 -3.0
966,156 - MPMX20_00916 0.60 -1.2
966,156 - MPMX20_00916 0.60 -0.6
966,187 + MPMX20_00916 0.64 -0.2
966,188 - MPMX20_00916 0.64 +0.3
966,196 + MPMX20_00916 0.65 -0.4
966,214 + MPMX20_00916 0.67 -0.1
966,226 + MPMX20_00916 0.68 -1.7
966,276 + MPMX20_00916 0.75 +0.3
966,309 - MPMX20_00916 0.79 -0.6
966,359 + MPMX20_00916 0.85 -1.7
966,385 + MPMX20_00916 0.88 -1.0
966,414 + -1.2
966,542 - MPMX20_00917 0.11 +0.3
966,542 - MPMX20_00917 0.11 -2.2
966,550 - MPMX20_00917 0.13 -0.2
966,557 - MPMX20_00917 0.14 -2.1
966,557 - MPMX20_00917 0.14 +0.5
966,603 + MPMX20_00917 0.21 -1.7
966,603 + MPMX20_00917 0.21 -0.8
966,611 - MPMX20_00917 0.22 -3.8
966,611 - MPMX20_00917 0.22 +0.9
966,611 - MPMX20_00917 0.22 -0.2
966,611 - MPMX20_00917 0.22 +0.8
966,611 - MPMX20_00917 0.22 -0.3
966,627 + MPMX20_00917 0.25 -1.4
966,683 + MPMX20_00917 0.33 -1.1
966,910 - MPMX20_00917 0.69 +0.5
966,910 - MPMX20_00917 0.69 -1.7
966,910 - MPMX20_00917 0.69 -0.7
966,972 + MPMX20_00917 0.79 -1.2
966,978 - MPMX20_00917 0.80 +2.8
966,978 - MPMX20_00917 0.80 -0.3
966,982 + MPMX20_00917 0.80 +0.1
967,067 - -1.6
967,082 + -0.5
967,090 - -0.4
967,090 - -0.2
967,090 - +2.5
967,141 + +1.4
967,234 - MPMX20_00918 0.20 -2.4
967,295 + MPMX20_00918 0.30 -0.4
967,296 - MPMX20_00918 0.30 +0.1
967,320 + MPMX20_00918 0.35 -0.9
967,320 + MPMX20_00918 0.35 -4.6
967,320 + MPMX20_00918 0.35 +0.9
967,391 + MPMX20_00918 0.46 -0.3
967,392 - MPMX20_00918 0.47 +0.1
967,428 + MPMX20_00918 0.53 -0.1
967,628 - MPMX20_00918 0.86 -2.4
967,637 + MPMX20_00918 0.88 -0.2
967,637 + MPMX20_00918 0.88 -2.3
967,637 + MPMX20_00918 0.88 -0.0
967,645 - MPMX20_00918 0.89 +0.6
967,656 - -1.6
967,704 + +0.1
967,712 - +0.5
967,746 + +0.2
967,778 - +0.5
967,926 + MPMX20_00919 0.17 +1.7
967,949 - MPMX20_00919 0.19 -1.4
967,975 + MPMX20_00919 0.21 -0.1
968,027 + MPMX20_00919 0.25 +0.0
968,032 + MPMX20_00919 0.25 -0.9
968,039 + MPMX20_00919 0.26 -0.4

Or see this region's nucleotide sequence