Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00074

Experiment: D-Tagatose (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00072 and MPMX20_00073 are separated by 99 nucleotidesMPMX20_00073 and MPMX20_00074 are separated by 117 nucleotidesMPMX20_00074 and MPMX20_00075 are separated by 77 nucleotides MPMX20_00072: MPMX20_00072 - 5-hydroxyisourate hydrolase, at 73,092 to 73,502 _00072 MPMX20_00073: MPMX20_00073 - HTH-type transcriptional regulator MlrA, at 73,602 to 74,327 _00073 MPMX20_00074: MPMX20_00074 - Outer membrane lipoprotein Blc, at 74,445 to 74,969 _00074 MPMX20_00075: MPMX20_00075 - hypothetical protein, at 75,047 to 76,093 _00075 Position (kb) 74 75Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 73.454 kb on + strand, within MPMX20_00072at 73.454 kb on + strand, within MPMX20_00072at 73.455 kb on + strand, within MPMX20_00072at 73.455 kb on + strand, within MPMX20_00072at 73.462 kb on - strandat 73.463 kb on - strandat 73.481 kb on + strandat 73.512 kb on - strandat 73.519 kb on - strandat 73.530 kb on + strandat 73.616 kb on + strandat 73.624 kb on - strandat 73.624 kb on - strandat 73.673 kb on + strandat 73.673 kb on + strandat 73.673 kb on + strandat 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.681 kb on - strand, within MPMX20_00073at 73.704 kb on - strand, within MPMX20_00073at 73.779 kb on + strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.787 kb on - strand, within MPMX20_00073at 73.821 kb on - strand, within MPMX20_00073at 73.865 kb on + strand, within MPMX20_00073at 73.865 kb on + strand, within MPMX20_00073at 73.887 kb on + strand, within MPMX20_00073at 73.927 kb on - strand, within MPMX20_00073at 73.930 kb on + strand, within MPMX20_00073at 73.975 kb on + strand, within MPMX20_00073at 73.985 kb on + strand, within MPMX20_00073at 73.985 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.990 kb on + strand, within MPMX20_00073at 73.993 kb on - strand, within MPMX20_00073at 73.996 kb on + strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 73.998 kb on - strand, within MPMX20_00073at 74.089 kb on - strand, within MPMX20_00073at 74.108 kb on + strand, within MPMX20_00073at 74.128 kb on + strand, within MPMX20_00073at 74.184 kb on + strand, within MPMX20_00073at 74.203 kb on + strand, within MPMX20_00073at 74.208 kb on - strand, within MPMX20_00073at 74.247 kb on + strand, within MPMX20_00073at 74.261 kb on + strandat 74.264 kb on - strandat 74.264 kb on - strandat 74.322 kb on + strandat 74.323 kb on + strandat 74.331 kb on - strandat 74.334 kb on + strandat 74.342 kb on - strandat 74.392 kb on + strandat 74.392 kb on + strandat 74.400 kb on - strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.402 kb on + strandat 74.460 kb on + strandat 74.460 kb on + strandat 74.468 kb on - strandat 74.468 kb on - strandat 74.482 kb on + strandat 74.515 kb on - strand, within MPMX20_00074at 74.524 kb on + strand, within MPMX20_00074at 74.525 kb on + strand, within MPMX20_00074at 74.619 kb on - strand, within MPMX20_00074at 74.685 kb on - strand, within MPMX20_00074at 74.785 kb on - strand, within MPMX20_00074at 74.788 kb on + strand, within MPMX20_00074at 74.796 kb on - strand, within MPMX20_00074at 74.826 kb on + strand, within MPMX20_00074at 74.893 kb on + strand, within MPMX20_00074at 74.898 kb on + strand, within MPMX20_00074at 74.917 kb on - strandat 74.917 kb on - strandat 74.946 kb on - strandat 74.951 kb on + strandat 74.951 kb on + strandat 74.951 kb on - strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.956 kb on + strandat 74.959 kb on - strandat 74.964 kb on - strandat 74.991 kb on + strandat 75.008 kb on + strandat 75.147 kb on - strandat 75.171 kb on + strand, within MPMX20_00075at 75.201 kb on + strand, within MPMX20_00075at 75.224 kb on + strand, within MPMX20_00075at 75.243 kb on - strand, within MPMX20_00075at 75.243 kb on - strand, within MPMX20_00075at 75.316 kb on + strand, within MPMX20_00075at 75.352 kb on - strand, within MPMX20_00075at 75.370 kb on + strand, within MPMX20_00075at 75.429 kb on + strand, within MPMX20_00075at 75.442 kb on - strand, within MPMX20_00075at 75.533 kb on - strand, within MPMX20_00075at 75.565 kb on + strand, within MPMX20_00075at 75.619 kb on + strand, within MPMX20_00075at 75.647 kb on + strand, within MPMX20_00075at 75.651 kb on + strand, within MPMX20_00075at 75.651 kb on + strand, within MPMX20_00075at 75.658 kb on - strand, within MPMX20_00075at 75.659 kb on - strand, within MPMX20_00075at 75.668 kb on - strand, within MPMX20_00075at 75.671 kb on - strand, within MPMX20_00075at 75.671 kb on - strand, within MPMX20_00075at 75.671 kb on - strand, within MPMX20_00075at 75.679 kb on + strand, within MPMX20_00075at 75.679 kb on + strand, within MPMX20_00075at 75.679 kb on + strand, within MPMX20_00075at 75.684 kb on + strand, within MPMX20_00075at 75.687 kb on - strand, within MPMX20_00075at 75.743 kb on + strand, within MPMX20_00075at 75.743 kb on + strand, within MPMX20_00075at 75.743 kb on + strand, within MPMX20_00075at 75.747 kb on + strand, within MPMX20_00075at 75.748 kb on + strand, within MPMX20_00075at 75.791 kb on - strand, within MPMX20_00075at 75.846 kb on + strand, within MPMX20_00075at 75.846 kb on + strand, within MPMX20_00075at 75.857 kb on + strand, within MPMX20_00075at 75.861 kb on + strand, within MPMX20_00075at 75.865 kb on - strand, within MPMX20_00075at 75.871 kb on + strand, within MPMX20_00075at 75.914 kb on - strand, within MPMX20_00075at 75.920 kb on - strand, within MPMX20_00075at 75.929 kb on - strand, within MPMX20_00075at 75.929 kb on - strand, within MPMX20_00075at 75.944 kb on - strand, within MPMX20_00075

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Tagatose (N)
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73,454 + MPMX20_00072 0.88 -1.3
73,454 + MPMX20_00072 0.88 -0.3
73,455 + MPMX20_00072 0.88 -1.2
73,455 + MPMX20_00072 0.88 -0.1
73,462 - +1.1
73,463 - -0.6
73,481 + -1.0
73,512 - +2.2
73,519 - +2.1
73,530 + -0.2
73,616 + +0.3
73,624 - -0.8
73,624 - -0.8
73,673 + +1.0
73,673 + +0.4
73,673 + +1.7
73,681 - MPMX20_00073 0.11 -0.4
73,681 - MPMX20_00073 0.11 +0.8
73,681 - MPMX20_00073 0.11 -2.7
73,681 - MPMX20_00073 0.11 +1.9
73,704 - MPMX20_00073 0.14 -0.4
73,779 + MPMX20_00073 0.24 -0.5
73,787 - MPMX20_00073 0.25 -2.1
73,787 - MPMX20_00073 0.25 +0.9
73,787 - MPMX20_00073 0.25 +1.2
73,821 - MPMX20_00073 0.30 +1.1
73,865 + MPMX20_00073 0.36 +0.5
73,865 + MPMX20_00073 0.36 -1.2
73,887 + MPMX20_00073 0.39 +1.5
73,927 - MPMX20_00073 0.45 +0.9
73,930 + MPMX20_00073 0.45 -0.2
73,975 + MPMX20_00073 0.51 -0.7
73,985 + MPMX20_00073 0.53 -0.9
73,985 + MPMX20_00073 0.53 -1.7
73,990 + MPMX20_00073 0.53 +0.4
73,990 + MPMX20_00073 0.53 -0.9
73,990 + MPMX20_00073 0.53 -0.9
73,990 + MPMX20_00073 0.53 -2.1
73,990 + MPMX20_00073 0.53 -0.2
73,993 - MPMX20_00073 0.54 +0.1
73,996 + MPMX20_00073 0.54 -0.9
73,998 - MPMX20_00073 0.55 -1.5
73,998 - MPMX20_00073 0.55 -0.5
73,998 - MPMX20_00073 0.55 -0.3
73,998 - MPMX20_00073 0.55 +0.7
74,089 - MPMX20_00073 0.67 -2.5
74,108 + MPMX20_00073 0.70 -0.5
74,128 + MPMX20_00073 0.72 +2.6
74,184 + MPMX20_00073 0.80 -1.6
74,203 + MPMX20_00073 0.83 -0.9
74,208 - MPMX20_00073 0.83 +3.0
74,247 + MPMX20_00073 0.89 -0.9
74,261 + -2.3
74,264 - +0.4
74,264 - +0.0
74,322 + -2.0
74,323 + +0.0
74,331 - -0.3
74,334 + -0.7
74,342 - -1.9
74,392 + -0.4
74,392 + +1.4
74,400 - -0.3
74,402 + -2.3
74,402 + +1.0
74,402 + -2.5
74,402 + +1.2
74,402 + -2.4
74,460 + +1.3
74,460 + +1.1
74,468 - +1.2
74,468 - -1.0
74,482 + -0.7
74,515 - MPMX20_00074 0.13 +0.8
74,524 + MPMX20_00074 0.15 -1.3
74,525 + MPMX20_00074 0.15 -1.0
74,619 - MPMX20_00074 0.33 -0.7
74,685 - MPMX20_00074 0.46 -1.9
74,785 - MPMX20_00074 0.65 +0.4
74,788 + MPMX20_00074 0.65 +0.4
74,796 - MPMX20_00074 0.67 -1.5
74,826 + MPMX20_00074 0.73 -0.4
74,893 + MPMX20_00074 0.85 -0.5
74,898 + MPMX20_00074 0.86 -1.2
74,917 - -3.5
74,917 - +1.3
74,946 - +1.1
74,951 + -0.2
74,951 + -0.7
74,951 - +0.3
74,956 + -2.1
74,956 + -0.4
74,956 + -1.3
74,956 + +1.2
74,956 + +1.4
74,959 - -0.9
74,964 - -1.7
74,991 + -1.5
75,008 + +0.0
75,147 - +0.4
75,171 + MPMX20_00075 0.12 +0.3
75,201 + MPMX20_00075 0.15 +0.7
75,224 + MPMX20_00075 0.17 +0.7
75,243 - MPMX20_00075 0.19 +1.1
75,243 - MPMX20_00075 0.19 +0.7
75,316 + MPMX20_00075 0.26 +0.9
75,352 - MPMX20_00075 0.29 -0.4
75,370 + MPMX20_00075 0.31 -0.2
75,429 + MPMX20_00075 0.36 -1.8
75,442 - MPMX20_00075 0.38 +0.4
75,533 - MPMX20_00075 0.46 +0.5
75,565 + MPMX20_00075 0.49 -2.5
75,619 + MPMX20_00075 0.55 -2.6
75,647 + MPMX20_00075 0.57 -2.1
75,651 + MPMX20_00075 0.58 -0.0
75,651 + MPMX20_00075 0.58 -1.4
75,658 - MPMX20_00075 0.58 +0.3
75,659 - MPMX20_00075 0.58 -2.4
75,668 - MPMX20_00075 0.59 -3.9
75,671 - MPMX20_00075 0.60 -1.1
75,671 - MPMX20_00075 0.60 -1.5
75,671 - MPMX20_00075 0.60 -1.5
75,679 + MPMX20_00075 0.60 -0.8
75,679 + MPMX20_00075 0.60 +0.3
75,679 + MPMX20_00075 0.60 +1.5
75,684 + MPMX20_00075 0.61 -0.0
75,687 - MPMX20_00075 0.61 -0.8
75,743 + MPMX20_00075 0.66 -2.6
75,743 + MPMX20_00075 0.66 -0.7
75,743 + MPMX20_00075 0.66 +0.1
75,747 + MPMX20_00075 0.67 +0.0
75,748 + MPMX20_00075 0.67 +1.4
75,791 - MPMX20_00075 0.71 -1.0
75,846 + MPMX20_00075 0.76 -1.7
75,846 + MPMX20_00075 0.76 -1.3
75,857 + MPMX20_00075 0.77 +0.0
75,861 + MPMX20_00075 0.78 +0.7
75,865 - MPMX20_00075 0.78 +0.3
75,871 + MPMX20_00075 0.79 -1.2
75,914 - MPMX20_00075 0.83 -0.0
75,920 - MPMX20_00075 0.83 +0.4
75,929 - MPMX20_00075 0.84 +0.0
75,929 - MPMX20_00075 0.84 -2.6
75,944 - MPMX20_00075 0.86 -1.0

Or see this region's nucleotide sequence