Strain Fitness in Pantoea sp. MT58 around IAI47_21745

Experiment: Ying_OrganicAcid7 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep B; time point 1
91,193	-				+0.9
91,251	-				-1.0
91,272	+				+0.4
91,272	+				-0.0
91,273	-				-0.6
91,273	-				+1.5
91,293	-				-0.6
91,305	+				+0.3
91,359	+				+0.8
91,418	-				-0.5
91,418	-				-2.0
91,418	-				-1.2
91,424	+				-0.4
91,424	+				-0.6
91,425	-				-0.5
91,425	-				+2.2
91,425	-				+1.2
91,425	-				-0.2
91,432	+				+0.5
91,432	+				-0.0
91,433	-				+0.8
91,463	+		IAI47_21740	0.11	+0.8
91,463	+		IAI47_21740	0.11	+0.2
91,464	-		IAI47_21740	0.11	-0.8
91,464	-		IAI47_21740	0.11	+1.4
91,467	+		IAI47_21740	0.11	-1.2
91,468	-		IAI47_21740	0.12	+1.2
91,468	-		IAI47_21740	0.12	+0.2
91,468	-		IAI47_21740	0.12	-1.6
91,506	+		IAI47_21740	0.16	-1.8
91,507	-		IAI47_21740	0.17	+0.4
91,507	-		IAI47_21740	0.17	-0.3
91,514	+		IAI47_21740	0.17	+1.4
91,515	-		IAI47_21740	0.18	-0.8
91,611	+		IAI47_21740	0.30	-0.2
91,611	+		IAI47_21740	0.30	+1.4
91,611	+		IAI47_21740	0.30	-0.4
91,612	-		IAI47_21740	0.30	+0.4
91,790	-		IAI47_21740	0.53	-0.9
91,790	-		IAI47_21740	0.53	-0.0
91,886	+		IAI47_21740	0.65	-0.8
91,886	+		IAI47_21740	0.65	-0.6
91,886	+		IAI47_21740	0.65	-1.3
91,887	-		IAI47_21740	0.65	-0.4
91,887	-		IAI47_21740	0.65	-0.8
91,941	+		IAI47_21740	0.72	+0.4
91,941	+		IAI47_21740	0.72	-0.9
91,941	+		IAI47_21740	0.72	+0.3
91,941	+		IAI47_21740	0.72	+1.4
91,941	+		IAI47_21740	0.72	+0.8
91,941	+		IAI47_21740	0.72	+1.2
91,941	+		IAI47_21740	0.72	-0.2
91,941	+		IAI47_21740	0.72	-2.0
91,942	-		IAI47_21740	0.72	+0.8
91,942	-		IAI47_21740	0.72	-0.4
91,942	-		IAI47_21740	0.72	-1.2
91,942	-		IAI47_21740	0.72	-1.2
91,942	-		IAI47_21740	0.72	+0.7
91,942	-		IAI47_21740	0.72	-1.8
91,943	+		IAI47_21740	0.72	+0.7
91,943	+		IAI47_21740	0.72	+2.2
91,943	+		IAI47_21740	0.72	-1.2
91,943	+		IAI47_21740	0.72	-0.2
91,943	+		IAI47_21740	0.72	+0.2
91,943	+		IAI47_21740	0.72	-0.3
91,943	+		IAI47_21740	0.72	-0.3
91,943	+		IAI47_21740	0.72	+0.7
91,943	+		IAI47_21740	0.72	+0.2
91,943	+		IAI47_21740	0.72	+0.4
91,944	-		IAI47_21740	0.72	+0.9
91,944	-		IAI47_21740	0.72	+0.2
91,944	-		IAI47_21740	0.72	+1.2
91,944	-		IAI47_21740	0.72	+0.8
91,944	-		IAI47_21740	0.72	-0.3
91,944	-		IAI47_21740	0.72	+1.0
91,944	-		IAI47_21740	0.72	-0.1
91,944	-		IAI47_21740	0.72	+0.1
91,944	-		IAI47_21740	0.72	-0.8
91,944	-		IAI47_21740	0.72	+0.5
91,944	-		IAI47_21740	0.72	+0.4
91,944	-		IAI47_21740	0.72	+3.3
91,944	-		IAI47_21740	0.72	+0.6
91,944	-		IAI47_21740	0.72	+0.6
91,955	+		IAI47_21740	0.74	+0.8
91,956	-		IAI47_21740	0.74	+1.2
91,982	+		IAI47_21740	0.77	-0.4
91,983	-		IAI47_21740	0.77	-0.4
91,983	-		IAI47_21740	0.77	-0.6
91,986	-		IAI47_21740	0.78	+2.8
92,150	-				+0.7
92,157	+				+0.6
92,157	+				+0.9
92,157	+				-0.3
92,157	+				+0.6
92,157	+				+0.2
92,157	+				+0.0
92,158	-				-1.3
92,191	+				-3.2
92,285	+				+0.3
92,329	-				-0.0
92,329	-				+1.8
92,347	+		IAI47_21745	0.10	-0.2
92,348	-		IAI47_21745	0.10	-0.8
92,348	-		IAI47_21745	0.10	+0.6
92,359	+		IAI47_21745	0.11	+0.8
92,573	+		IAI47_21745	0.24	+0.8
92,573	+		IAI47_21745	0.24	+0.4
92,573	+		IAI47_21745	0.24	+0.3
92,574	-		IAI47_21745	0.24	-1.2
92,574	-		IAI47_21745	0.24	+0.9
92,665	+		IAI47_21745	0.29	-0.4
92,665	+		IAI47_21745	0.29	+0.8
92,666	-		IAI47_21745	0.29	-0.9
92,666	-		IAI47_21745	0.29	-0.8
92,684	-		IAI47_21745	0.30	+0.2
92,684	-		IAI47_21745	0.30	-0.8
92,684	-		IAI47_21745	0.30	-1.2
92,684	-		IAI47_21745	0.30	-0.4
92,722	+		IAI47_21745	0.33	+1.2
92,723	-		IAI47_21745	0.33	-0.4
92,739	+		IAI47_21745	0.34	-0.7
92,739	+		IAI47_21745	0.34	+0.4
92,739	+		IAI47_21745	0.34	-0.7
92,740	-		IAI47_21745	0.34	-0.4
92,740	-		IAI47_21745	0.34	-0.0
92,740	-		IAI47_21745	0.34	+0.6
92,740	-		IAI47_21745	0.34	-2.6
92,740	-		IAI47_21745	0.34	-0.7
92,808	+		IAI47_21745	0.38	-0.3
92,872	+		IAI47_21745	0.42	-1.4
92,872	+		IAI47_21745	0.42	+0.5
92,878	+		IAI47_21745	0.42	-0.4
92,879	-		IAI47_21745	0.42	-2.2
92,897	+		IAI47_21745	0.43	+1.2
92,897	+		IAI47_21745	0.43	+0.9
92,898	-		IAI47_21745	0.43	+0.8
92,898	-		IAI47_21745	0.43	-1.7
92,898	-		IAI47_21745	0.43	+0.8
92,962	+		IAI47_21745	0.47	-0.5
92,962	+		IAI47_21745	0.47	-0.3
92,962	+		IAI47_21745	0.47	+1.4
92,966	-		IAI47_21745	0.47	-0.4
92,966	-		IAI47_21745	0.47	+0.7
93,021	-		IAI47_21745	0.50	+1.2
93,035	+		IAI47_21745	0.51	-1.4
93,035	+		IAI47_21745	0.51	-0.2
93,035	+		IAI47_21745	0.51	+1.0
93,036	-		IAI47_21745	0.51	+0.2
93,036	-		IAI47_21745	0.51	-0.4
93,036	-		IAI47_21745	0.51	-0.2
93,114	-		IAI47_21745	0.56	-0.2
93,161	-		IAI47_21745	0.59	-1.6
93,175	+		IAI47_21745	0.60	+0.2
93,176	-		IAI47_21745	0.60	+0.8
93,178	+		IAI47_21745	0.60	-0.5
93,179	-		IAI47_21745	0.60	-0.8
93,179	-		IAI47_21745	0.60	-0.2
93,179	-		IAI47_21745	0.60	-2.2
93,214	+		IAI47_21745	0.62	-1.0
93,214	+		IAI47_21745	0.62	-1.8
93,214	+		IAI47_21745	0.62	-0.7
93,214	+		IAI47_21745	0.62	-1.5
93,215	-		IAI47_21745	0.62	-0.8
93,215	-		IAI47_21745	0.62	-1.4
93,215	-		IAI47_21745	0.62	+0.9
93,215	-		IAI47_21745	0.62	-0.9
93,215	-		IAI47_21745	0.62	+1.8
93,215	-		IAI47_21745	0.62	+0.5
93,247	-		IAI47_21745	0.64	+0.6
93,322	+		IAI47_21745	0.68	-0.5
93,322	+		IAI47_21745	0.68	+0.5
93,322	+		IAI47_21745	0.68	+0.2
93,322	+		IAI47_21745	0.68	+0.2
93,322	+		IAI47_21745	0.68	+0.2
93,322	+		IAI47_21745	0.68	+0.6
93,322	+		IAI47_21745	0.68	-1.4
93,322	+		IAI47_21745	0.68	-1.4
93,323	-		IAI47_21745	0.68	+1.2
93,323	-		IAI47_21745	0.68	+0.6
93,323	-		IAI47_21745	0.68	-0.2
93,323	-		IAI47_21745	0.68	-0.6
93,325	+		IAI47_21745	0.69	-0.3
93,325	+		IAI47_21745	0.69	-0.2
93,326	-		IAI47_21745	0.69	-0.4
93,326	-		IAI47_21745	0.69	-0.6
93,326	-		IAI47_21745	0.69	+0.4
93,352	+		IAI47_21745	0.70	-0.2
93,352	+		IAI47_21745	0.70	-0.2
93,358	+		IAI47_21745	0.70	+0.4
93,358	+		IAI47_21745	0.70	-0.6
93,358	+		IAI47_21745	0.70	-0.6
93,358	+		IAI47_21745	0.70	-0.6
93,358	+		IAI47_21745	0.70	-0.7
93,359	-		IAI47_21745	0.71	+2.8
93,384	-		IAI47_21745	0.72	-0.7
93,389	+		IAI47_21745	0.72	-0.2
93,389	+		IAI47_21745	0.72	+0.8
93,571	+		IAI47_21745	0.83	-0.4
93,572	-		IAI47_21745	0.83	+0.3
93,572	-		IAI47_21745	0.83	-0.8
93,602	+		IAI47_21745	0.85	+1.2
93,602	+		IAI47_21745	0.85	-0.1
93,602	+		IAI47_21745	0.85	+1.5
93,603	-		IAI47_21745	0.85	-0.2
93,635	+		IAI47_21745	0.87	+0.8
93,676	+		IAI47_21745	0.89	-0.7
93,683	+		IAI47_21745	0.90	-0.9
93,742	+				-1.6
93,800	+				+0.8
93,800	+				+0.9
93,800	+				+2.8
93,800	+				-0.6
93,801	-				+1.6
93,801	-				+0.7
93,801	-				+1.4
93,851	+				+0.8
93,851	+				-2.2
93,851	+				-1.8
93,851	+				+0.2
93,852	-				+2.5
93,861	+				-0.6
93,862	-				+0.2
93,862	-				+0.2
94,040	+		IAI47_21750	0.21	-0.4
94,041	-		IAI47_21750	0.21	-0.4
94,143	+		IAI47_21750	0.34	+1.2
94,143	+		IAI47_21750	0.34	-0.0
94,143	+		IAI47_21750	0.34	+0.6
94,143	+		IAI47_21750	0.34	+1.2
94,144	-		IAI47_21750	0.34	+1.5
94,144	-		IAI47_21750	0.34	-1.0
94,144	-		IAI47_21750	0.34	+0.3
94,144	-		IAI47_21750	0.34	+0.5
94,144	-		IAI47_21750	0.34	-0.8
94,198	+		IAI47_21750	0.41	+3.5
94,198	+		IAI47_21750	0.41	-2.4
94,198	+		IAI47_21750	0.41	+0.6
94,198	+		IAI47_21750	0.41	+0.2
94,198	+		IAI47_21750	0.41	-0.4
94,199	-		IAI47_21750	0.42	-0.2
94,199	-		IAI47_21750	0.42	-1.2
94,199	-		IAI47_21750	0.42	-0.5
94,199	-		IAI47_21750	0.42	+0.4
94,230	+		IAI47_21750	0.46	+1.2
94,231	-		IAI47_21750	0.46	-0.4
94,245	+		IAI47_21750	0.48	+0.6
94,409	+		IAI47_21750	0.69	-0.3
94,409	+		IAI47_21750	0.69	+0.4
94,409	+		IAI47_21750	0.69	+1.9
94,409	+		IAI47_21750	0.69	+1.8
94,410	-		IAI47_21750	0.69	+1.2
94,410	-		IAI47_21750	0.69	-0.2
94,410	-		IAI47_21750	0.69	-1.0
94,524	+		IAI47_21750	0.84	-1.2
94,524	+		IAI47_21750	0.84	-0.2
94,524	+		IAI47_21750	0.84	-0.6
94,525	-		IAI47_21750	0.84	-0.1
94,527	+		IAI47_21750	0.84	+1.8
94,527	+		IAI47_21750	0.84	-0.4
94,527	+		IAI47_21750	0.84	-0.4
94,528	-		IAI47_21750	0.84	+0.6
94,528	-		IAI47_21750	0.84	+0.6
94,528	-		IAI47_21750	0.84	+0.3
94,528	-		IAI47_21750	0.84	-0.8
94,576	+				+0.8
94,576	+				+0.9
94,576	+				+0.8
94,576	+				+0.2
94,576	+				+1.8
94,577	-				+1.8
94,600	+				-0.1
94,601	-				+0.9
94,601	-				+0.9
94,644	+				-0.4
94,644	+				-0.6
94,644	+				+3.2
94,644	+				+2.2
94,644	+				+0.3
94,645	-				-0.3
94,712	-				+0.2
94,712	-				+1.0
94,759	+				-1.0
94,759	+				+0.3
94,759	+				-0.8
94,759	+				-0.1
94,759	+				+0.9
94,759	+				-0.1
94,759	+				-0.9
94,760	-				-1.2
94,760	-				+0.2
94,760	-				-0.2
94,760	-				-1.2
94,760	-				+0.5
94,760	-				-0.4
94,807	+				+3.0
94,807	+				+0.4
94,808	-				-0.8
94,808	-				+1.2
94,808	-				-0.1
94,811	-				+0.2
94,811	-				+0.4
94,846	+				+0.5
94,846	+				+0.4