Experiment: butyrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03284 and MPMX20_03285 are separated by 127 nucleotides MPMX20_03285 and MPMX20_03286 are separated by 61 nucleotides
MPMX20_03284: MPMX20_03284 - L-glyceraldehyde 3-phosphate reductase, at 3,456,997 to 3,457,995
_03284
MPMX20_03285: MPMX20_03285 - hypothetical protein, at 3,458,123 to 3,458,470
_03285
MPMX20_03286: MPMX20_03286 - Divalent metal cation transporter MntH, at 3,458,532 to 3,459,770
_03286
Position (kb)
3458
3459 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3457.209 kb on - strand, within MPMX20_03284 at 3457.283 kb on - strand, within MPMX20_03284 at 3457.290 kb on + strand, within MPMX20_03284 at 3457.298 kb on - strand, within MPMX20_03284 at 3457.298 kb on - strand, within MPMX20_03284 at 3457.311 kb on + strand, within MPMX20_03284 at 3457.337 kb on + strand, within MPMX20_03284 at 3457.372 kb on - strand, within MPMX20_03284 at 3457.388 kb on - strand, within MPMX20_03284 at 3457.434 kb on + strand, within MPMX20_03284 at 3457.442 kb on + strand, within MPMX20_03284 at 3457.462 kb on + strand, within MPMX20_03284 at 3457.474 kb on + strand, within MPMX20_03284 at 3457.513 kb on + strand, within MPMX20_03284 at 3457.521 kb on - strand, within MPMX20_03284 at 3457.548 kb on + strand, within MPMX20_03284 at 3457.590 kb on + strand, within MPMX20_03284 at 3457.598 kb on - strand, within MPMX20_03284 at 3457.748 kb on + strand, within MPMX20_03284 at 3457.748 kb on + strand, within MPMX20_03284 at 3457.850 kb on - strand, within MPMX20_03284 at 3457.871 kb on + strand, within MPMX20_03284 at 3457.871 kb on + strand, within MPMX20_03284 at 3457.881 kb on + strand, within MPMX20_03284 at 3457.975 kb on + strand at 3457.975 kb on + strand at 3457.983 kb on - strand at 3457.985 kb on + strand at 3457.985 kb on + strand at 3458.119 kb on + strand at 3458.385 kb on - strand, within MPMX20_03285 at 3458.441 kb on + strand at 3458.450 kb on + strand at 3458.538 kb on + strand at 3458.543 kb on + strand at 3458.546 kb on - strand at 3458.546 kb on - strand at 3458.546 kb on - strand at 3458.548 kb on + strand at 3458.625 kb on + strand at 3458.625 kb on + strand at 3458.625 kb on + strand at 3458.625 kb on + strand at 3458.689 kb on - strand, within MPMX20_03286 at 3458.739 kb on + strand, within MPMX20_03286 at 3458.794 kb on + strand, within MPMX20_03286 at 3458.824 kb on - strand, within MPMX20_03286 at 3458.861 kb on - strand, within MPMX20_03286 at 3458.869 kb on - strand, within MPMX20_03286 at 3458.936 kb on + strand, within MPMX20_03286 at 3458.941 kb on + strand, within MPMX20_03286 at 3458.943 kb on - strand, within MPMX20_03286 at 3459.010 kb on + strand, within MPMX20_03286 at 3459.091 kb on - strand, within MPMX20_03286 at 3459.159 kb on - strand, within MPMX20_03286 at 3459.193 kb on + strand, within MPMX20_03286 at 3459.193 kb on - strand, within MPMX20_03286 at 3459.193 kb on - strand, within MPMX20_03286 at 3459.273 kb on - strand, within MPMX20_03286 at 3459.273 kb on - strand, within MPMX20_03286 at 3459.364 kb on + strand, within MPMX20_03286 at 3459.379 kb on + strand, within MPMX20_03286 at 3459.387 kb on - strand, within MPMX20_03286 at 3459.397 kb on - strand, within MPMX20_03286
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (N) remove 3,457,209 - MPMX20_03284 0.21 -0.9 3,457,283 - MPMX20_03284 0.29 -0.0 3,457,290 + MPMX20_03284 0.29 -0.8 3,457,298 - MPMX20_03284 0.30 -3.6 3,457,298 - MPMX20_03284 0.30 +1.0 3,457,311 + MPMX20_03284 0.31 -0.4 3,457,337 + MPMX20_03284 0.34 +1.4 3,457,372 - MPMX20_03284 0.38 -3.2 3,457,388 - MPMX20_03284 0.39 +1.2 3,457,434 + MPMX20_03284 0.44 -1.9 3,457,442 + MPMX20_03284 0.45 +0.6 3,457,462 + MPMX20_03284 0.47 +0.8 3,457,474 + MPMX20_03284 0.48 -1.8 3,457,513 + MPMX20_03284 0.52 -0.6 3,457,521 - MPMX20_03284 0.52 -2.3 3,457,548 + MPMX20_03284 0.55 -0.4 3,457,590 + MPMX20_03284 0.59 -2.6 3,457,598 - MPMX20_03284 0.60 -0.3 3,457,748 + MPMX20_03284 0.75 -3.1 3,457,748 + MPMX20_03284 0.75 -0.5 3,457,850 - MPMX20_03284 0.85 +2.7 3,457,871 + MPMX20_03284 0.87 +1.6 3,457,871 + MPMX20_03284 0.87 -0.0 3,457,881 + MPMX20_03284 0.88 +0.3 3,457,975 + -1.3 3,457,975 + -0.4 3,457,983 - -2.6 3,457,985 + -3.1 3,457,985 + +0.2 3,458,119 + -0.4 3,458,385 - MPMX20_03285 0.75 -2.8 3,458,441 + +0.8 3,458,450 + +0.5 3,458,538 + -3.6 3,458,543 + -3.0 3,458,546 - +0.3 3,458,546 - -1.4 3,458,546 - -0.6 3,458,548 + -2.1 3,458,625 + +1.4 3,458,625 + +0.5 3,458,625 + -3.0 3,458,625 + -1.9 3,458,689 - MPMX20_03286 0.13 +0.0 3,458,739 + MPMX20_03286 0.17 -0.7 3,458,794 + MPMX20_03286 0.21 +0.0 3,458,824 - MPMX20_03286 0.24 +0.3 3,458,861 - MPMX20_03286 0.27 +0.4 3,458,869 - MPMX20_03286 0.27 +0.2 3,458,936 + MPMX20_03286 0.33 +0.9 3,458,941 + MPMX20_03286 0.33 -0.5 3,458,943 - MPMX20_03286 0.33 -0.8 3,459,010 + MPMX20_03286 0.39 +0.7 3,459,091 - MPMX20_03286 0.45 -1.5 3,459,159 - MPMX20_03286 0.51 -2.0 3,459,193 + MPMX20_03286 0.53 -0.8 3,459,193 - MPMX20_03286 0.53 +0.1 3,459,193 - MPMX20_03286 0.53 -1.3 3,459,273 - MPMX20_03286 0.60 +0.6 3,459,273 - MPMX20_03286 0.60 +0.7 3,459,364 + MPMX20_03286 0.67 +0.6 3,459,379 + MPMX20_03286 0.68 -2.0 3,459,387 - MPMX20_03286 0.69 +0.8 3,459,397 - MPMX20_03286 0.70 -3.5
Or see this region's nucleotide sequence