Experiment: butyrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02771 and MPMX20_02772 are separated by 264 nucleotides MPMX20_02772 and MPMX20_02773 overlap by 4 nucleotides MPMX20_02773 and MPMX20_02774 are separated by 51 nucleotides
MPMX20_02771: MPMX20_02771 - Aspartate--tRNA ligase, at 2,925,166 to 2,926,953
_02771
MPMX20_02772: MPMX20_02772 - Isochorismatase family protein YecD, at 2,927,218 to 2,927,784
_02772
MPMX20_02773: MPMX20_02773 - hypothetical protein, at 2,927,781 to 2,928,599
_02773
MPMX20_02774: MPMX20_02774 - Inner membrane protein YecN, at 2,928,651 to 2,929,046
_02774
Position (kb)
2927
2928 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2927.082 kb on + strand at 2927.082 kb on + strand at 2927.109 kb on + strand at 2927.174 kb on - strand at 2927.182 kb on + strand at 2927.225 kb on + strand at 2927.278 kb on - strand, within MPMX20_02772 at 2927.293 kb on + strand, within MPMX20_02772 at 2927.303 kb on + strand, within MPMX20_02772 at 2927.311 kb on - strand, within MPMX20_02772 at 2927.360 kb on - strand, within MPMX20_02772 at 2927.411 kb on + strand, within MPMX20_02772 at 2927.425 kb on + strand, within MPMX20_02772 at 2927.557 kb on - strand, within MPMX20_02772 at 2927.648 kb on - strand, within MPMX20_02772 at 2927.715 kb on - strand, within MPMX20_02772 at 2927.717 kb on + strand, within MPMX20_02772 at 2927.756 kb on + strand at 2927.788 kb on + strand at 2927.788 kb on + strand at 2927.788 kb on + strand at 2927.788 kb on + strand at 2927.788 kb on + strand at 2927.788 kb on + strand at 2927.796 kb on - strand at 2927.796 kb on - strand at 2927.796 kb on - strand at 2927.806 kb on - strand at 2927.839 kb on - strand at 2927.840 kb on - strand at 2927.858 kb on - strand at 2927.872 kb on + strand, within MPMX20_02773 at 2927.903 kb on + strand, within MPMX20_02773 at 2927.903 kb on + strand, within MPMX20_02773 at 2927.903 kb on + strand, within MPMX20_02773 at 2927.903 kb on + strand, within MPMX20_02773 at 2927.903 kb on + strand, within MPMX20_02773 at 2927.911 kb on - strand, within MPMX20_02773 at 2927.911 kb on - strand, within MPMX20_02773 at 2927.911 kb on - strand, within MPMX20_02773 at 2927.916 kb on - strand, within MPMX20_02773 at 2927.932 kb on - strand, within MPMX20_02773 at 2927.990 kb on - strand, within MPMX20_02773 at 2927.992 kb on + strand, within MPMX20_02773 at 2928.000 kb on - strand, within MPMX20_02773 at 2928.015 kb on + strand, within MPMX20_02773 at 2928.015 kb on + strand, within MPMX20_02773 at 2928.023 kb on - strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.094 kb on + strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.102 kb on - strand, within MPMX20_02773 at 2928.163 kb on + strand, within MPMX20_02773 at 2928.171 kb on - strand, within MPMX20_02773 at 2928.178 kb on - strand, within MPMX20_02773 at 2928.213 kb on + strand, within MPMX20_02773 at 2928.213 kb on + strand, within MPMX20_02773 at 2928.221 kb on - strand, within MPMX20_02773 at 2928.241 kb on + strand, within MPMX20_02773 at 2928.270 kb on + strand, within MPMX20_02773 at 2928.278 kb on - strand, within MPMX20_02773 at 2928.326 kb on + strand, within MPMX20_02773 at 2928.465 kb on - strand, within MPMX20_02773 at 2928.502 kb on + strand, within MPMX20_02773 at 2928.502 kb on + strand, within MPMX20_02773 at 2928.510 kb on - strand, within MPMX20_02773 at 2928.510 kb on - strand, within MPMX20_02773 at 2928.510 kb on - strand, within MPMX20_02773 at 2928.510 kb on - strand, within MPMX20_02773 at 2928.582 kb on - strand at 2928.605 kb on + strand at 2928.656 kb on - strand at 2928.679 kb on + strand at 2928.729 kb on - strand, within MPMX20_02774
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (N) remove 2,927,082 + +1.2 2,927,082 + -3.9 2,927,109 + +1.2 2,927,174 - +0.6 2,927,182 + -1.9 2,927,225 + -2.2 2,927,278 - MPMX20_02772 0.11 -2.6 2,927,293 + MPMX20_02772 0.13 +0.7 2,927,303 + MPMX20_02772 0.15 +0.7 2,927,311 - MPMX20_02772 0.16 +0.6 2,927,360 - MPMX20_02772 0.25 +0.9 2,927,411 + MPMX20_02772 0.34 +1.6 2,927,425 + MPMX20_02772 0.37 +0.3 2,927,557 - MPMX20_02772 0.60 -2.9 2,927,648 - MPMX20_02772 0.76 +1.7 2,927,715 - MPMX20_02772 0.88 -0.8 2,927,717 + MPMX20_02772 0.88 +1.0 2,927,756 + -2.4 2,927,788 + +0.6 2,927,788 + +0.5 2,927,788 + +1.0 2,927,788 + +0.6 2,927,788 + -0.8 2,927,788 + -1.3 2,927,796 - -0.4 2,927,796 - -1.7 2,927,796 - +0.0 2,927,806 - -1.7 2,927,839 - -2.1 2,927,840 - -3.6 2,927,858 - -0.7 2,927,872 + MPMX20_02773 0.11 -1.8 2,927,903 + MPMX20_02773 0.15 -1.5 2,927,903 + MPMX20_02773 0.15 +0.3 2,927,903 + MPMX20_02773 0.15 -0.8 2,927,903 + MPMX20_02773 0.15 -2.2 2,927,903 + MPMX20_02773 0.15 -2.2 2,927,911 - MPMX20_02773 0.16 -0.6 2,927,911 - MPMX20_02773 0.16 -0.8 2,927,911 - MPMX20_02773 0.16 +1.4 2,927,916 - MPMX20_02773 0.16 -4.2 2,927,932 - MPMX20_02773 0.18 +0.7 2,927,990 - MPMX20_02773 0.26 +1.6 2,927,992 + MPMX20_02773 0.26 -1.5 2,928,000 - MPMX20_02773 0.27 -2.8 2,928,015 + MPMX20_02773 0.29 +1.1 2,928,015 + MPMX20_02773 0.29 +0.5 2,928,023 - MPMX20_02773 0.30 -1.7 2,928,094 + MPMX20_02773 0.38 +0.1 2,928,094 + MPMX20_02773 0.38 -0.6 2,928,094 + MPMX20_02773 0.38 -0.3 2,928,094 + MPMX20_02773 0.38 -0.2 2,928,094 + MPMX20_02773 0.38 +2.1 2,928,094 + MPMX20_02773 0.38 +1.5 2,928,094 + MPMX20_02773 0.38 -0.7 2,928,102 - MPMX20_02773 0.39 +1.0 2,928,102 - MPMX20_02773 0.39 -1.7 2,928,102 - MPMX20_02773 0.39 +0.0 2,928,102 - MPMX20_02773 0.39 +1.4 2,928,102 - MPMX20_02773 0.39 -1.3 2,928,102 - MPMX20_02773 0.39 +0.6 2,928,102 - MPMX20_02773 0.39 +1.4 2,928,102 - MPMX20_02773 0.39 -3.4 2,928,102 - MPMX20_02773 0.39 -0.9 2,928,102 - MPMX20_02773 0.39 -0.7 2,928,102 - MPMX20_02773 0.39 -0.1 2,928,102 - MPMX20_02773 0.39 -3.7 2,928,163 + MPMX20_02773 0.47 +0.5 2,928,171 - MPMX20_02773 0.48 -1.4 2,928,178 - MPMX20_02773 0.48 +1.3 2,928,213 + MPMX20_02773 0.53 -0.7 2,928,213 + MPMX20_02773 0.53 +2.4 2,928,221 - MPMX20_02773 0.54 -2.6 2,928,241 + MPMX20_02773 0.56 +0.2 2,928,270 + MPMX20_02773 0.60 +2.1 2,928,278 - MPMX20_02773 0.61 +1.4 2,928,326 + MPMX20_02773 0.67 -1.2 2,928,465 - MPMX20_02773 0.84 +0.5 2,928,502 + MPMX20_02773 0.88 -1.0 2,928,502 + MPMX20_02773 0.88 +0.6 2,928,510 - MPMX20_02773 0.89 +1.2 2,928,510 - MPMX20_02773 0.89 +2.1 2,928,510 - MPMX20_02773 0.89 -3.1 2,928,510 - MPMX20_02773 0.89 -3.2 2,928,582 - +0.1 2,928,605 + -0.2 2,928,656 - -0.4 2,928,679 + -1.2 2,928,729 - MPMX20_02774 0.20 -1.3
Or see this region's nucleotide sequence