Experiment: butyrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01772 and MPMX20_01773 are separated by 12 nucleotides MPMX20_01773 and MPMX20_01774 are separated by 154 nucleotides MPMX20_01774 and MPMX20_01775 are separated by 89 nucleotides
MPMX20_01772: MPMX20_01772 - Malonyl CoA-acyl carrier protein transacylase, at 1,864,853 to 1,865,782
_01772
MPMX20_01773: MPMX20_01773 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 1,865,795 to 1,866,529
_01773
MPMX20_01774: MPMX20_01774 - Acyl carrier protein, at 1,866,684 to 1,866,920
_01774
MPMX20_01775: MPMX20_01775 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 1,867,010 to 1,868,251
_01775
Position (kb)
1866
1867 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1865.724 kb on + strand at 1867.031 kb on - strand at 1867.031 kb on - strand at 1867.118 kb on - strand at 1867.213 kb on + strand, within MPMX20_01775 at 1867.221 kb on - strand, within MPMX20_01775 at 1867.280 kb on - strand, within MPMX20_01775 at 1867.349 kb on - strand, within MPMX20_01775 at 1867.365 kb on + strand, within MPMX20_01775 at 1867.370 kb on + strand, within MPMX20_01775 at 1867.371 kb on - strand, within MPMX20_01775 at 1867.503 kb on + strand, within MPMX20_01775 at 1867.503 kb on + strand, within MPMX20_01775 at 1867.623 kb on - strand, within MPMX20_01775 at 1867.713 kb on - strand, within MPMX20_01775 at 1867.736 kb on - strand, within MPMX20_01775 at 1867.773 kb on + strand, within MPMX20_01775 at 1867.813 kb on + strand, within MPMX20_01775 at 1867.869 kb on - strand, within MPMX20_01775 at 1867.917 kb on - strand, within MPMX20_01775
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (N) remove 1,865,724 + +0.8 1,867,031 - -2.7 1,867,031 - +0.3 1,867,118 - +1.5 1,867,213 + MPMX20_01775 0.16 -1.8 1,867,221 - MPMX20_01775 0.17 +3.6 1,867,280 - MPMX20_01775 0.22 +1.4 1,867,349 - MPMX20_01775 0.27 +1.7 1,867,365 + MPMX20_01775 0.29 +3.4 1,867,370 + MPMX20_01775 0.29 +0.9 1,867,371 - MPMX20_01775 0.29 +1.1 1,867,503 + MPMX20_01775 0.40 +1.0 1,867,503 + MPMX20_01775 0.40 +2.7 1,867,623 - MPMX20_01775 0.49 +0.6 1,867,713 - MPMX20_01775 0.57 -1.1 1,867,736 - MPMX20_01775 0.58 +1.5 1,867,773 + MPMX20_01775 0.61 +0.8 1,867,813 + MPMX20_01775 0.65 +1.5 1,867,869 - MPMX20_01775 0.69 -0.7 1,867,917 - MPMX20_01775 0.73 -1.7
Or see this region's nucleotide sequence