Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01774

Experiment: butyrate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01772 and MPMX20_01773 are separated by 12 nucleotidesMPMX20_01773 and MPMX20_01774 are separated by 154 nucleotidesMPMX20_01774 and MPMX20_01775 are separated by 89 nucleotides MPMX20_01772: MPMX20_01772 - Malonyl CoA-acyl carrier protein transacylase, at 1,864,853 to 1,865,782 _01772 MPMX20_01773: MPMX20_01773 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 1,865,795 to 1,866,529 _01773 MPMX20_01774: MPMX20_01774 - Acyl carrier protein, at 1,866,684 to 1,866,920 _01774 MPMX20_01775: MPMX20_01775 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 1,867,010 to 1,868,251 _01775 Position (kb) 1866 1867Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1865.724 kb on + strandat 1867.031 kb on - strandat 1867.031 kb on - strandat 1867.118 kb on - strandat 1867.213 kb on + strand, within MPMX20_01775at 1867.221 kb on - strand, within MPMX20_01775at 1867.280 kb on - strand, within MPMX20_01775at 1867.349 kb on - strand, within MPMX20_01775at 1867.365 kb on + strand, within MPMX20_01775at 1867.370 kb on + strand, within MPMX20_01775at 1867.371 kb on - strand, within MPMX20_01775at 1867.503 kb on + strand, within MPMX20_01775at 1867.503 kb on + strand, within MPMX20_01775at 1867.623 kb on - strand, within MPMX20_01775at 1867.713 kb on - strand, within MPMX20_01775at 1867.736 kb on - strand, within MPMX20_01775at 1867.773 kb on + strand, within MPMX20_01775at 1867.813 kb on + strand, within MPMX20_01775at 1867.869 kb on - strand, within MPMX20_01775at 1867.917 kb on - strand, within MPMX20_01775

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Per-strain Table

Position Strand Gene LocusTag Fraction butyrate (N)
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1,865,724 + +0.8
1,867,031 - -2.7
1,867,031 - +0.3
1,867,118 - +1.5
1,867,213 + MPMX20_01775 0.16 -1.8
1,867,221 - MPMX20_01775 0.17 +3.6
1,867,280 - MPMX20_01775 0.22 +1.4
1,867,349 - MPMX20_01775 0.27 +1.7
1,867,365 + MPMX20_01775 0.29 +3.4
1,867,370 + MPMX20_01775 0.29 +0.9
1,867,371 - MPMX20_01775 0.29 +1.1
1,867,503 + MPMX20_01775 0.40 +1.0
1,867,503 + MPMX20_01775 0.40 +2.7
1,867,623 - MPMX20_01775 0.49 +0.6
1,867,713 - MPMX20_01775 0.57 -1.1
1,867,736 - MPMX20_01775 0.58 +1.5
1,867,773 + MPMX20_01775 0.61 +0.8
1,867,813 + MPMX20_01775 0.65 +1.5
1,867,869 - MPMX20_01775 0.69 -0.7
1,867,917 - MPMX20_01775 0.73 -1.7

Or see this region's nucleotide sequence