Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02747

Experiment: octanoate (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02745 and MPMX20_02746 are separated by 406 nucleotidesMPMX20_02746 and MPMX20_02747 are separated by 16 nucleotidesMPMX20_02747 and MPMX20_02748 are separated by 1 nucleotidesMPMX20_02748 and MPMX20_02749 are separated by 137 nucleotidesMPMX20_02749 and MPMX20_02750 are separated by 109 nucleotides MPMX20_02745: MPMX20_02745 - hypothetical protein, at 2,900,666 to 2,901,607 _02745 MPMX20_02746: MPMX20_02746 - hypothetical protein, at 2,902,014 to 2,902,352 _02746 MPMX20_02747: MPMX20_02747 - Inner membrane protein YebZ, at 2,902,369 to 2,903,238 _02747 MPMX20_02748: MPMX20_02748 - Protein YobA, at 2,903,240 to 2,903,611 _02748 MPMX20_02749: MPMX20_02749 - DNA polymerase III subunit theta, at 2,903,749 to 2,903,979 _02749 MPMX20_02750: MPMX20_02750 - hypothetical protein, at 2,904,089 to 2,904,739 _02750 Position (kb) 2902 2903 2904Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2901.393 kb on + strand, within MPMX20_02745at 2901.401 kb on - strand, within MPMX20_02745at 2901.444 kb on + strand, within MPMX20_02745at 2901.457 kb on - strand, within MPMX20_02745at 2901.558 kb on + strandat 2901.558 kb on + strandat 2901.558 kb on + strandat 2901.558 kb on + strandat 2901.558 kb on + strandat 2901.566 kb on + strandat 2901.566 kb on - strandat 2901.566 kb on - strandat 2901.574 kb on - strandat 2901.624 kb on + strandat 2901.823 kb on + strandat 2901.867 kb on - strandat 2902.014 kb on - strandat 2902.054 kb on - strand, within MPMX20_02746at 2902.091 kb on + strand, within MPMX20_02746at 2902.166 kb on + strand, within MPMX20_02746at 2902.198 kb on - strand, within MPMX20_02746at 2902.218 kb on - strand, within MPMX20_02746at 2902.270 kb on - strand, within MPMX20_02746at 2902.287 kb on - strand, within MPMX20_02746at 2902.304 kb on - strand, within MPMX20_02746at 2902.307 kb on + strand, within MPMX20_02746at 2902.317 kb on + strand, within MPMX20_02746at 2902.383 kb on - strandat 2902.421 kb on + strandat 2902.423 kb on - strandat 2902.464 kb on - strand, within MPMX20_02747at 2902.582 kb on - strand, within MPMX20_02747at 2902.582 kb on - strand, within MPMX20_02747at 2902.665 kb on + strand, within MPMX20_02747at 2902.673 kb on + strand, within MPMX20_02747at 2902.700 kb on + strand, within MPMX20_02747at 2902.752 kb on + strand, within MPMX20_02747at 2902.770 kb on - strand, within MPMX20_02747at 2902.777 kb on + strand, within MPMX20_02747at 2902.779 kb on + strand, within MPMX20_02747at 2902.785 kb on - strand, within MPMX20_02747at 2902.785 kb on - strand, within MPMX20_02747at 2902.800 kb on + strand, within MPMX20_02747at 2902.847 kb on - strand, within MPMX20_02747at 2902.866 kb on + strand, within MPMX20_02747at 2902.866 kb on + strand, within MPMX20_02747at 2902.866 kb on + strand, within MPMX20_02747at 2902.874 kb on - strand, within MPMX20_02747at 2902.874 kb on - strand, within MPMX20_02747at 2902.874 kb on - strand, within MPMX20_02747at 2902.874 kb on - strand, within MPMX20_02747at 2902.876 kb on - strand, within MPMX20_02747at 2902.894 kb on + strand, within MPMX20_02747at 2902.894 kb on + strand, within MPMX20_02747at 2902.955 kb on + strand, within MPMX20_02747at 2902.964 kb on + strand, within MPMX20_02747at 2902.986 kb on - strand, within MPMX20_02747at 2902.986 kb on - strand, within MPMX20_02747at 2902.988 kb on - strand, within MPMX20_02747at 2902.997 kb on + strand, within MPMX20_02747at 2903.064 kb on - strand, within MPMX20_02747at 2903.088 kb on - strand, within MPMX20_02747at 2903.150 kb on + strand, within MPMX20_02747at 2903.159 kb on + strandat 2903.169 kb on - strandat 2903.169 kb on - strandat 2903.209 kb on + strandat 2903.214 kb on + strandat 2903.214 kb on + strandat 2903.214 kb on + strandat 2903.217 kb on - strandat 2903.217 kb on - strandat 2903.222 kb on - strandat 2903.222 kb on - strandat 2903.222 kb on - strandat 2903.227 kb on - strandat 2903.399 kb on + strand, within MPMX20_02748at 2903.404 kb on + strand, within MPMX20_02748at 2903.443 kb on + strand, within MPMX20_02748at 2903.443 kb on + strand, within MPMX20_02748at 2903.451 kb on - strand, within MPMX20_02748at 2903.510 kb on + strand, within MPMX20_02748at 2903.510 kb on + strand, within MPMX20_02748at 2903.523 kb on + strand, within MPMX20_02748at 2903.546 kb on + strand, within MPMX20_02748at 2903.554 kb on - strand, within MPMX20_02748at 2903.600 kb on + strandat 2903.600 kb on + strandat 2903.600 kb on + strandat 2903.608 kb on - strandat 2903.608 kb on - strandat 2903.609 kb on - strandat 2903.609 kb on - strandat 2903.656 kb on - strandat 2903.690 kb on + strandat 2903.768 kb on + strandat 2903.833 kb on - strand, within MPMX20_02749at 2903.835 kb on + strand, within MPMX20_02749at 2903.835 kb on + strand, within MPMX20_02749at 2903.865 kb on + strand, within MPMX20_02749at 2903.865 kb on + strand, within MPMX20_02749at 2903.882 kb on + strand, within MPMX20_02749at 2903.908 kb on - strand, within MPMX20_02749at 2903.936 kb on + strand, within MPMX20_02749at 2903.944 kb on - strand, within MPMX20_02749at 2903.987 kb on - strandat 2903.998 kb on - strandat 2904.005 kb on + strandat 2904.062 kb on + strandat 2904.072 kb on + strandat 2904.072 kb on + strandat 2904.072 kb on + strandat 2904.080 kb on - strandat 2904.080 kb on - strandat 2904.080 kb on - strandat 2904.080 kb on - strandat 2904.080 kb on - strandat 2904.080 kb on - strandat 2904.080 kb on - strandat 2904.128 kb on + strandat 2904.138 kb on + strandat 2904.138 kb on + strandat 2904.228 kb on - strand, within MPMX20_02750

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Per-strain Table

Position Strand Gene LocusTag Fraction octanoate (N)
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2,901,393 + MPMX20_02745 0.77 -1.1
2,901,401 - MPMX20_02745 0.78 +0.3
2,901,444 + MPMX20_02745 0.83 +1.0
2,901,457 - MPMX20_02745 0.84 +3.2
2,901,558 + -1.2
2,901,558 + -0.6
2,901,558 + -0.8
2,901,558 + -1.3
2,901,558 + -0.2
2,901,566 + +1.7
2,901,566 - -1.3
2,901,566 - +1.5
2,901,574 - +0.3
2,901,624 + -3.2
2,901,823 + +1.1
2,901,867 - +2.1
2,902,014 - +0.4
2,902,054 - MPMX20_02746 0.12 +3.1
2,902,091 + MPMX20_02746 0.23 +0.6
2,902,166 + MPMX20_02746 0.45 -0.9
2,902,198 - MPMX20_02746 0.54 -0.0
2,902,218 - MPMX20_02746 0.60 +0.9
2,902,270 - MPMX20_02746 0.76 +1.8
2,902,287 - MPMX20_02746 0.81 +1.6
2,902,304 - MPMX20_02746 0.86 -1.7
2,902,307 + MPMX20_02746 0.86 +1.4
2,902,317 + MPMX20_02746 0.89 +1.5
2,902,383 - +3.5
2,902,421 + +0.2
2,902,423 - -0.2
2,902,464 - MPMX20_02747 0.11 -1.1
2,902,582 - MPMX20_02747 0.24 +0.9
2,902,582 - MPMX20_02747 0.24 -0.6
2,902,665 + MPMX20_02747 0.34 +0.9
2,902,673 + MPMX20_02747 0.35 +0.4
2,902,700 + MPMX20_02747 0.38 +0.2
2,902,752 + MPMX20_02747 0.44 +0.1
2,902,770 - MPMX20_02747 0.46 -0.9
2,902,777 + MPMX20_02747 0.47 -3.6
2,902,779 + MPMX20_02747 0.47 +1.2
2,902,785 - MPMX20_02747 0.48 +0.9
2,902,785 - MPMX20_02747 0.48 -1.3
2,902,800 + MPMX20_02747 0.50 +1.4
2,902,847 - MPMX20_02747 0.55 +0.9
2,902,866 + MPMX20_02747 0.57 -1.6
2,902,866 + MPMX20_02747 0.57 +0.7
2,902,866 + MPMX20_02747 0.57 -0.3
2,902,874 - MPMX20_02747 0.58 -0.2
2,902,874 - MPMX20_02747 0.58 +0.9
2,902,874 - MPMX20_02747 0.58 -3.0
2,902,874 - MPMX20_02747 0.58 +1.7
2,902,876 - MPMX20_02747 0.58 -0.4
2,902,894 + MPMX20_02747 0.60 -2.7
2,902,894 + MPMX20_02747 0.60 +0.2
2,902,955 + MPMX20_02747 0.67 -0.8
2,902,964 + MPMX20_02747 0.68 -3.8
2,902,986 - MPMX20_02747 0.71 -1.9
2,902,986 - MPMX20_02747 0.71 -0.2
2,902,988 - MPMX20_02747 0.71 -1.6
2,902,997 + MPMX20_02747 0.72 -1.4
2,903,064 - MPMX20_02747 0.80 -2.1
2,903,088 - MPMX20_02747 0.83 +0.7
2,903,150 + MPMX20_02747 0.90 +0.6
2,903,159 + -1.5
2,903,169 - +0.5
2,903,169 - +0.4
2,903,209 + -3.1
2,903,214 + -0.1
2,903,214 + -1.6
2,903,214 + +1.8
2,903,217 - -2.0
2,903,217 - +1.3
2,903,222 - +2.2
2,903,222 - -3.8
2,903,222 - +1.0
2,903,227 - +1.3
2,903,399 + MPMX20_02748 0.43 +0.1
2,903,404 + MPMX20_02748 0.44 -1.8
2,903,443 + MPMX20_02748 0.55 +0.7
2,903,443 + MPMX20_02748 0.55 +0.0
2,903,451 - MPMX20_02748 0.57 +1.2
2,903,510 + MPMX20_02748 0.73 -1.8
2,903,510 + MPMX20_02748 0.73 +1.1
2,903,523 + MPMX20_02748 0.76 -0.4
2,903,546 + MPMX20_02748 0.82 +1.7
2,903,554 - MPMX20_02748 0.84 +0.3
2,903,600 + +0.6
2,903,600 + +0.2
2,903,600 + +1.0
2,903,608 - -1.8
2,903,608 - +1.2
2,903,609 - -0.6
2,903,609 - +0.2
2,903,656 - -2.9
2,903,690 + +0.1
2,903,768 + +0.7
2,903,833 - MPMX20_02749 0.36 -1.9
2,903,835 + MPMX20_02749 0.37 -1.3
2,903,835 + MPMX20_02749 0.37 +0.7
2,903,865 + MPMX20_02749 0.50 +0.1
2,903,865 + MPMX20_02749 0.50 -0.9
2,903,882 + MPMX20_02749 0.58 +0.7
2,903,908 - MPMX20_02749 0.69 +1.4
2,903,936 + MPMX20_02749 0.81 +2.4
2,903,944 - MPMX20_02749 0.84 +1.8
2,903,987 - -1.8
2,903,998 - +1.3
2,904,005 + -0.0
2,904,062 + +1.2
2,904,072 + -1.0
2,904,072 + +0.1
2,904,072 + +0.4
2,904,080 - -1.3
2,904,080 - -3.2
2,904,080 - +0.7
2,904,080 - +0.2
2,904,080 - +0.3
2,904,080 - -0.6
2,904,080 - -2.6
2,904,128 + -2.5
2,904,138 + +1.9
2,904,138 + +0.9
2,904,228 - MPMX20_02750 0.21 -0.3

Or see this region's nucleotide sequence