Experiment: D-Mannose (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01414 and MPMX20_01415 are separated by 58 nucleotides MPMX20_01415 and MPMX20_01416 are separated by 58 nucleotides MPMX20_01416 and MPMX20_01417 overlap by 1 nucleotides
MPMX20_01414: MPMX20_01414 - Molybdopterin synthase catalytic subunit, at 1,477,316 to 1,477,768
_01414
MPMX20_01415: MPMX20_01415 - Inner membrane protein YbhL, at 1,477,827 to 1,478,534
_01415
MPMX20_01416: MPMX20_01416 - Inner membrane protein YbhN, at 1,478,593 to 1,479,555
_01416
MPMX20_01417: MPMX20_01417 - Cardiolipin synthase B, at 1,479,555 to 1,480,796
_01417
Position (kb)
1478
1479
1480 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1477.666 kb on + strand, within MPMX20_01414 at 1477.722 kb on + strand, within MPMX20_01414 at 1477.776 kb on + strand at 1477.776 kb on + strand at 1477.792 kb on - strand at 1477.798 kb on - strand at 1477.870 kb on + strand at 1477.878 kb on - strand at 1477.898 kb on + strand, within MPMX20_01415 at 1478.093 kb on + strand, within MPMX20_01415 at 1478.110 kb on - strand, within MPMX20_01415 at 1478.112 kb on - strand, within MPMX20_01415 at 1478.145 kb on + strand, within MPMX20_01415 at 1478.145 kb on + strand, within MPMX20_01415 at 1478.153 kb on - strand, within MPMX20_01415 at 1478.220 kb on - strand, within MPMX20_01415 at 1478.233 kb on - strand, within MPMX20_01415 at 1478.235 kb on + strand, within MPMX20_01415 at 1478.273 kb on + strand, within MPMX20_01415 at 1478.309 kb on + strand, within MPMX20_01415 at 1478.317 kb on + strand, within MPMX20_01415 at 1478.327 kb on + strand, within MPMX20_01415 at 1478.330 kb on - strand, within MPMX20_01415 at 1478.431 kb on + strand, within MPMX20_01415 at 1478.439 kb on - strand, within MPMX20_01415 at 1478.439 kb on - strand, within MPMX20_01415 at 1478.439 kb on - strand, within MPMX20_01415 at 1478.439 kb on - strand, within MPMX20_01415 at 1478.462 kb on - strand, within MPMX20_01415 at 1478.472 kb on - strand at 1478.503 kb on - strand at 1478.537 kb on + strand at 1478.565 kb on - strand at 1478.575 kb on - strand at 1478.579 kb on - strand at 1478.644 kb on + strand at 1478.660 kb on - strand at 1478.689 kb on + strand at 1478.695 kb on - strand, within MPMX20_01416 at 1478.697 kb on + strand, within MPMX20_01416 at 1478.697 kb on + strand, within MPMX20_01416 at 1478.705 kb on - strand, within MPMX20_01416 at 1478.710 kb on - strand, within MPMX20_01416 at 1478.734 kb on - strand, within MPMX20_01416 at 1478.855 kb on - strand, within MPMX20_01416 at 1478.928 kb on - strand, within MPMX20_01416 at 1478.932 kb on + strand, within MPMX20_01416 at 1478.969 kb on - strand, within MPMX20_01416 at 1479.015 kb on - strand, within MPMX20_01416 at 1479.021 kb on - strand, within MPMX20_01416 at 1479.021 kb on - strand, within MPMX20_01416 at 1479.088 kb on - strand, within MPMX20_01416 at 1479.088 kb on - strand, within MPMX20_01416 at 1479.088 kb on - strand, within MPMX20_01416 at 1479.088 kb on - strand, within MPMX20_01416 at 1479.097 kb on + strand, within MPMX20_01416 at 1479.138 kb on + strand, within MPMX20_01416 at 1479.138 kb on + strand, within MPMX20_01416 at 1479.140 kb on + strand, within MPMX20_01416 at 1479.140 kb on + strand, within MPMX20_01416 at 1479.148 kb on - strand, within MPMX20_01416 at 1479.249 kb on + strand, within MPMX20_01416 at 1479.257 kb on - strand, within MPMX20_01416 at 1479.296 kb on + strand, within MPMX20_01416 at 1479.302 kb on + strand, within MPMX20_01416 at 1479.308 kb on - strand, within MPMX20_01416 at 1479.348 kb on + strand, within MPMX20_01416 at 1479.400 kb on + strand, within MPMX20_01416 at 1479.408 kb on - strand, within MPMX20_01416 at 1479.441 kb on + strand, within MPMX20_01416 at 1479.596 kb on - strand at 1479.738 kb on - strand, within MPMX20_01417 at 1479.887 kb on + strand, within MPMX20_01417 at 1479.919 kb on - strand, within MPMX20_01417 at 1479.924 kb on - strand, within MPMX20_01417 at 1479.924 kb on - strand, within MPMX20_01417 at 1479.964 kb on + strand, within MPMX20_01417 at 1480.024 kb on - strand, within MPMX20_01417 at 1480.078 kb on + strand, within MPMX20_01417 at 1480.138 kb on + strand, within MPMX20_01417 at 1480.166 kb on + strand, within MPMX20_01417 at 1480.190 kb on - strand, within MPMX20_01417 at 1480.197 kb on - strand, within MPMX20_01417 at 1480.323 kb on + strand, within MPMX20_01417 at 1480.331 kb on - strand, within MPMX20_01417 at 1480.331 kb on - strand, within MPMX20_01417 at 1480.389 kb on + strand, within MPMX20_01417 at 1480.405 kb on - strand, within MPMX20_01417 at 1480.468 kb on - strand, within MPMX20_01417 at 1480.502 kb on + strand, within MPMX20_01417 at 1480.511 kb on - strand, within MPMX20_01417
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (N) remove 1,477,666 + MPMX20_01414 0.77 +1.1 1,477,722 + MPMX20_01414 0.90 -0.1 1,477,776 + -1.6 1,477,776 + -3.0 1,477,792 - -0.4 1,477,798 - -3.0 1,477,870 + -0.7 1,477,878 - -3.3 1,477,898 + MPMX20_01415 0.10 -2.1 1,478,093 + MPMX20_01415 0.38 -1.2 1,478,110 - MPMX20_01415 0.40 -0.8 1,478,112 - MPMX20_01415 0.40 +0.3 1,478,145 + MPMX20_01415 0.45 -0.1 1,478,145 + MPMX20_01415 0.45 +0.2 1,478,153 - MPMX20_01415 0.46 -2.0 1,478,220 - MPMX20_01415 0.56 -0.4 1,478,233 - MPMX20_01415 0.57 -0.2 1,478,235 + MPMX20_01415 0.58 +1.3 1,478,273 + MPMX20_01415 0.63 -0.6 1,478,309 + MPMX20_01415 0.68 -2.5 1,478,317 + MPMX20_01415 0.69 -0.4 1,478,327 + MPMX20_01415 0.71 -0.1 1,478,330 - MPMX20_01415 0.71 -0.1 1,478,431 + MPMX20_01415 0.85 -1.8 1,478,439 - MPMX20_01415 0.86 +0.3 1,478,439 - MPMX20_01415 0.86 -2.8 1,478,439 - MPMX20_01415 0.86 -1.4 1,478,439 - MPMX20_01415 0.86 -0.3 1,478,462 - MPMX20_01415 0.90 -1.6 1,478,472 - -4.1 1,478,503 - -0.2 1,478,537 + +0.9 1,478,565 - -0.7 1,478,575 - +0.9 1,478,579 - -0.7 1,478,644 + -2.0 1,478,660 - +0.6 1,478,689 + +0.2 1,478,695 - MPMX20_01416 0.11 +0.9 1,478,697 + MPMX20_01416 0.11 +0.1 1,478,697 + MPMX20_01416 0.11 +0.5 1,478,705 - MPMX20_01416 0.12 +1.1 1,478,710 - MPMX20_01416 0.12 -2.0 1,478,734 - MPMX20_01416 0.15 +1.1 1,478,855 - MPMX20_01416 0.27 +3.0 1,478,928 - MPMX20_01416 0.35 -1.9 1,478,932 + MPMX20_01416 0.35 -1.2 1,478,969 - MPMX20_01416 0.39 -0.7 1,479,015 - MPMX20_01416 0.44 -0.1 1,479,021 - MPMX20_01416 0.44 -0.6 1,479,021 - MPMX20_01416 0.44 -0.4 1,479,088 - MPMX20_01416 0.51 -3.1 1,479,088 - MPMX20_01416 0.51 +0.6 1,479,088 - MPMX20_01416 0.51 +0.1 1,479,088 - MPMX20_01416 0.51 +3.3 1,479,097 + MPMX20_01416 0.52 +1.7 1,479,138 + MPMX20_01416 0.57 +0.3 1,479,138 + MPMX20_01416 0.57 +1.7 1,479,140 + MPMX20_01416 0.57 -1.8 1,479,140 + MPMX20_01416 0.57 -2.1 1,479,148 - MPMX20_01416 0.58 -0.4 1,479,249 + MPMX20_01416 0.68 -0.7 1,479,257 - MPMX20_01416 0.69 +1.3 1,479,296 + MPMX20_01416 0.73 +0.1 1,479,302 + MPMX20_01416 0.74 +1.7 1,479,308 - MPMX20_01416 0.74 -0.0 1,479,348 + MPMX20_01416 0.78 +0.8 1,479,400 + MPMX20_01416 0.84 -4.1 1,479,408 - MPMX20_01416 0.85 -0.4 1,479,441 + MPMX20_01416 0.88 -1.0 1,479,596 - -0.4 1,479,738 - MPMX20_01417 0.15 +2.1 1,479,887 + MPMX20_01417 0.27 +0.8 1,479,919 - MPMX20_01417 0.29 -0.3 1,479,924 - MPMX20_01417 0.30 +0.0 1,479,924 - MPMX20_01417 0.30 -2.6 1,479,964 + MPMX20_01417 0.33 +0.5 1,480,024 - MPMX20_01417 0.38 +0.1 1,480,078 + MPMX20_01417 0.42 +2.2 1,480,138 + MPMX20_01417 0.47 +1.1 1,480,166 + MPMX20_01417 0.49 -0.7 1,480,190 - MPMX20_01417 0.51 +1.9 1,480,197 - MPMX20_01417 0.52 -0.8 1,480,323 + MPMX20_01417 0.62 +2.3 1,480,331 - MPMX20_01417 0.62 +1.5 1,480,331 - MPMX20_01417 0.62 +1.8 1,480,389 + MPMX20_01417 0.67 -0.9 1,480,405 - MPMX20_01417 0.68 +1.0 1,480,468 - MPMX20_01417 0.74 -1.4 1,480,502 + MPMX20_01417 0.76 -3.3 1,480,511 - MPMX20_01417 0.77 +0.4
Or see this region's nucleotide sequence