Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01416

Experiment: D-Mannose (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01414 and MPMX20_01415 are separated by 58 nucleotidesMPMX20_01415 and MPMX20_01416 are separated by 58 nucleotidesMPMX20_01416 and MPMX20_01417 overlap by 1 nucleotides MPMX20_01414: MPMX20_01414 - Molybdopterin synthase catalytic subunit, at 1,477,316 to 1,477,768 _01414 MPMX20_01415: MPMX20_01415 - Inner membrane protein YbhL, at 1,477,827 to 1,478,534 _01415 MPMX20_01416: MPMX20_01416 - Inner membrane protein YbhN, at 1,478,593 to 1,479,555 _01416 MPMX20_01417: MPMX20_01417 - Cardiolipin synthase B, at 1,479,555 to 1,480,796 _01417 Position (kb) 1478 1479 1480Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1477.666 kb on + strand, within MPMX20_01414at 1477.722 kb on + strand, within MPMX20_01414at 1477.776 kb on + strandat 1477.776 kb on + strandat 1477.792 kb on - strandat 1477.798 kb on - strandat 1477.870 kb on + strandat 1477.878 kb on - strandat 1477.898 kb on + strand, within MPMX20_01415at 1478.093 kb on + strand, within MPMX20_01415at 1478.110 kb on - strand, within MPMX20_01415at 1478.112 kb on - strand, within MPMX20_01415at 1478.145 kb on + strand, within MPMX20_01415at 1478.145 kb on + strand, within MPMX20_01415at 1478.153 kb on - strand, within MPMX20_01415at 1478.220 kb on - strand, within MPMX20_01415at 1478.233 kb on - strand, within MPMX20_01415at 1478.235 kb on + strand, within MPMX20_01415at 1478.273 kb on + strand, within MPMX20_01415at 1478.309 kb on + strand, within MPMX20_01415at 1478.317 kb on + strand, within MPMX20_01415at 1478.327 kb on + strand, within MPMX20_01415at 1478.330 kb on - strand, within MPMX20_01415at 1478.431 kb on + strand, within MPMX20_01415at 1478.439 kb on - strand, within MPMX20_01415at 1478.439 kb on - strand, within MPMX20_01415at 1478.439 kb on - strand, within MPMX20_01415at 1478.439 kb on - strand, within MPMX20_01415at 1478.462 kb on - strand, within MPMX20_01415at 1478.472 kb on - strandat 1478.503 kb on - strandat 1478.537 kb on + strandat 1478.565 kb on - strandat 1478.575 kb on - strandat 1478.579 kb on - strandat 1478.644 kb on + strandat 1478.660 kb on - strandat 1478.689 kb on + strandat 1478.695 kb on - strand, within MPMX20_01416at 1478.697 kb on + strand, within MPMX20_01416at 1478.697 kb on + strand, within MPMX20_01416at 1478.705 kb on - strand, within MPMX20_01416at 1478.710 kb on - strand, within MPMX20_01416at 1478.734 kb on - strand, within MPMX20_01416at 1478.855 kb on - strand, within MPMX20_01416at 1478.928 kb on - strand, within MPMX20_01416at 1478.932 kb on + strand, within MPMX20_01416at 1478.969 kb on - strand, within MPMX20_01416at 1479.015 kb on - strand, within MPMX20_01416at 1479.021 kb on - strand, within MPMX20_01416at 1479.021 kb on - strand, within MPMX20_01416at 1479.088 kb on - strand, within MPMX20_01416at 1479.088 kb on - strand, within MPMX20_01416at 1479.088 kb on - strand, within MPMX20_01416at 1479.088 kb on - strand, within MPMX20_01416at 1479.097 kb on + strand, within MPMX20_01416at 1479.138 kb on + strand, within MPMX20_01416at 1479.138 kb on + strand, within MPMX20_01416at 1479.140 kb on + strand, within MPMX20_01416at 1479.140 kb on + strand, within MPMX20_01416at 1479.148 kb on - strand, within MPMX20_01416at 1479.249 kb on + strand, within MPMX20_01416at 1479.257 kb on - strand, within MPMX20_01416at 1479.296 kb on + strand, within MPMX20_01416at 1479.302 kb on + strand, within MPMX20_01416at 1479.308 kb on - strand, within MPMX20_01416at 1479.348 kb on + strand, within MPMX20_01416at 1479.400 kb on + strand, within MPMX20_01416at 1479.408 kb on - strand, within MPMX20_01416at 1479.441 kb on + strand, within MPMX20_01416at 1479.596 kb on - strandat 1479.738 kb on - strand, within MPMX20_01417at 1479.887 kb on + strand, within MPMX20_01417at 1479.919 kb on - strand, within MPMX20_01417at 1479.924 kb on - strand, within MPMX20_01417at 1479.924 kb on - strand, within MPMX20_01417at 1479.964 kb on + strand, within MPMX20_01417at 1480.024 kb on - strand, within MPMX20_01417at 1480.078 kb on + strand, within MPMX20_01417at 1480.138 kb on + strand, within MPMX20_01417at 1480.166 kb on + strand, within MPMX20_01417at 1480.190 kb on - strand, within MPMX20_01417at 1480.197 kb on - strand, within MPMX20_01417at 1480.323 kb on + strand, within MPMX20_01417at 1480.331 kb on - strand, within MPMX20_01417at 1480.331 kb on - strand, within MPMX20_01417at 1480.389 kb on + strand, within MPMX20_01417at 1480.405 kb on - strand, within MPMX20_01417at 1480.468 kb on - strand, within MPMX20_01417at 1480.502 kb on + strand, within MPMX20_01417at 1480.511 kb on - strand, within MPMX20_01417

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannose (N)
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1,477,666 + MPMX20_01414 0.77 +1.1
1,477,722 + MPMX20_01414 0.90 -0.1
1,477,776 + -1.6
1,477,776 + -3.0
1,477,792 - -0.4
1,477,798 - -3.0
1,477,870 + -0.7
1,477,878 - -3.3
1,477,898 + MPMX20_01415 0.10 -2.1
1,478,093 + MPMX20_01415 0.38 -1.2
1,478,110 - MPMX20_01415 0.40 -0.8
1,478,112 - MPMX20_01415 0.40 +0.3
1,478,145 + MPMX20_01415 0.45 -0.1
1,478,145 + MPMX20_01415 0.45 +0.2
1,478,153 - MPMX20_01415 0.46 -2.0
1,478,220 - MPMX20_01415 0.56 -0.4
1,478,233 - MPMX20_01415 0.57 -0.2
1,478,235 + MPMX20_01415 0.58 +1.3
1,478,273 + MPMX20_01415 0.63 -0.6
1,478,309 + MPMX20_01415 0.68 -2.5
1,478,317 + MPMX20_01415 0.69 -0.4
1,478,327 + MPMX20_01415 0.71 -0.1
1,478,330 - MPMX20_01415 0.71 -0.1
1,478,431 + MPMX20_01415 0.85 -1.8
1,478,439 - MPMX20_01415 0.86 +0.3
1,478,439 - MPMX20_01415 0.86 -2.8
1,478,439 - MPMX20_01415 0.86 -1.4
1,478,439 - MPMX20_01415 0.86 -0.3
1,478,462 - MPMX20_01415 0.90 -1.6
1,478,472 - -4.1
1,478,503 - -0.2
1,478,537 + +0.9
1,478,565 - -0.7
1,478,575 - +0.9
1,478,579 - -0.7
1,478,644 + -2.0
1,478,660 - +0.6
1,478,689 + +0.2
1,478,695 - MPMX20_01416 0.11 +0.9
1,478,697 + MPMX20_01416 0.11 +0.1
1,478,697 + MPMX20_01416 0.11 +0.5
1,478,705 - MPMX20_01416 0.12 +1.1
1,478,710 - MPMX20_01416 0.12 -2.0
1,478,734 - MPMX20_01416 0.15 +1.1
1,478,855 - MPMX20_01416 0.27 +3.0
1,478,928 - MPMX20_01416 0.35 -1.9
1,478,932 + MPMX20_01416 0.35 -1.2
1,478,969 - MPMX20_01416 0.39 -0.7
1,479,015 - MPMX20_01416 0.44 -0.1
1,479,021 - MPMX20_01416 0.44 -0.6
1,479,021 - MPMX20_01416 0.44 -0.4
1,479,088 - MPMX20_01416 0.51 -3.1
1,479,088 - MPMX20_01416 0.51 +0.6
1,479,088 - MPMX20_01416 0.51 +0.1
1,479,088 - MPMX20_01416 0.51 +3.3
1,479,097 + MPMX20_01416 0.52 +1.7
1,479,138 + MPMX20_01416 0.57 +0.3
1,479,138 + MPMX20_01416 0.57 +1.7
1,479,140 + MPMX20_01416 0.57 -1.8
1,479,140 + MPMX20_01416 0.57 -2.1
1,479,148 - MPMX20_01416 0.58 -0.4
1,479,249 + MPMX20_01416 0.68 -0.7
1,479,257 - MPMX20_01416 0.69 +1.3
1,479,296 + MPMX20_01416 0.73 +0.1
1,479,302 + MPMX20_01416 0.74 +1.7
1,479,308 - MPMX20_01416 0.74 -0.0
1,479,348 + MPMX20_01416 0.78 +0.8
1,479,400 + MPMX20_01416 0.84 -4.1
1,479,408 - MPMX20_01416 0.85 -0.4
1,479,441 + MPMX20_01416 0.88 -1.0
1,479,596 - -0.4
1,479,738 - MPMX20_01417 0.15 +2.1
1,479,887 + MPMX20_01417 0.27 +0.8
1,479,919 - MPMX20_01417 0.29 -0.3
1,479,924 - MPMX20_01417 0.30 +0.0
1,479,924 - MPMX20_01417 0.30 -2.6
1,479,964 + MPMX20_01417 0.33 +0.5
1,480,024 - MPMX20_01417 0.38 +0.1
1,480,078 + MPMX20_01417 0.42 +2.2
1,480,138 + MPMX20_01417 0.47 +1.1
1,480,166 + MPMX20_01417 0.49 -0.7
1,480,190 - MPMX20_01417 0.51 +1.9
1,480,197 - MPMX20_01417 0.52 -0.8
1,480,323 + MPMX20_01417 0.62 +2.3
1,480,331 - MPMX20_01417 0.62 +1.5
1,480,331 - MPMX20_01417 0.62 +1.8
1,480,389 + MPMX20_01417 0.67 -0.9
1,480,405 - MPMX20_01417 0.68 +1.0
1,480,468 - MPMX20_01417 0.74 -1.4
1,480,502 + MPMX20_01417 0.76 -3.3
1,480,511 - MPMX20_01417 0.77 +0.4

Or see this region's nucleotide sequence