Strain Fitness in Pantoea sp. MT58 around IAI47_09360

Experiment: Ying_AminoAcid20 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 1
1,976,386	-				-0.5
1,977,275	-				+0.9
1,977,307	-				+0.1
1,977,307	-				+0.7
1,977,339	+				+0.1
1,977,340	-				+1.1
1,977,720	-		IAI47_09360	0.46	-1.3
1,977,720	-		IAI47_09360	0.46	+0.5
1,977,743	-		IAI47_09360	0.49	+0.7
1,977,890	-		IAI47_09360	0.67	-0.3
1,978,159	-				+1.6
1,978,171	+				+0.1
1,978,171	+				+1.1
1,978,172	-				+1.7
1,978,172	-				-0.3
1,979,155	-				-0.4
1,979,155	-				+1.3