Experiment: D-Salicin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04600 and MPMX20_04601 are separated by 311 nucleotides MPMX20_04601 and MPMX20_04602 are separated by 341 nucleotides
MPMX20_04600: MPMX20_04600 - putative GTP-binding protein EngB, at 4,816,200 to 4,816,829
_04600
MPMX20_04601: MPMX20_04601 - DNA polymerase I, at 4,817,141 to 4,819,933
_04601
MPMX20_04602: MPMX20_04602 - putative acyltransferase YihG, at 4,820,275 to 4,821,282
_04602
Position (kb)
4817
4818
4819
4820 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4816.824 kb on + strand at 4816.832 kb on - strand at 4816.832 kb on - strand at 4816.897 kb on + strand at 4816.897 kb on + strand at 4816.949 kb on + strand at 4816.957 kb on - strand at 4816.972 kb on - strand at 4816.982 kb on - strand at 4816.982 kb on - strand at 4816.982 kb on - strand at 4816.987 kb on - strand at 4817.138 kb on + strand at 4817.166 kb on + strand at 4817.341 kb on - strand at 4817.498 kb on - strand, within MPMX20_04601 at 4817.668 kb on - strand, within MPMX20_04601 at 4817.695 kb on - strand, within MPMX20_04601 at 4818.198 kb on - strand, within MPMX20_04601 at 4818.939 kb on - strand, within MPMX20_04601 at 4818.939 kb on - strand, within MPMX20_04601 at 4818.987 kb on - strand, within MPMX20_04601 at 4819.975 kb on - strand at 4819.989 kb on + strand at 4820.108 kb on + strand at 4820.117 kb on - strand at 4820.210 kb on + strand at 4820.210 kb on + strand at 4820.210 kb on + strand at 4820.218 kb on - strand at 4820.218 kb on - strand at 4820.218 kb on - strand at 4820.218 kb on - strand at 4820.261 kb on - strand at 4820.284 kb on + strand at 4820.322 kb on + strand at 4820.356 kb on - strand at 4820.404 kb on + strand, within MPMX20_04602 at 4820.430 kb on + strand, within MPMX20_04602 at 4820.439 kb on + strand, within MPMX20_04602 at 4820.439 kb on + strand, within MPMX20_04602 at 4820.439 kb on + strand, within MPMX20_04602 at 4820.439 kb on + strand, within MPMX20_04602 at 4820.444 kb on + strand, within MPMX20_04602 at 4820.444 kb on + strand, within MPMX20_04602 at 4820.444 kb on + strand, within MPMX20_04602 at 4820.447 kb on - strand, within MPMX20_04602 at 4820.447 kb on - strand, within MPMX20_04602 at 4820.447 kb on - strand, within MPMX20_04602 at 4820.452 kb on - strand, within MPMX20_04602 at 4820.452 kb on - strand, within MPMX20_04602 at 4820.452 kb on - strand, within MPMX20_04602 at 4820.471 kb on + strand, within MPMX20_04602 at 4820.481 kb on + strand, within MPMX20_04602 at 4820.549 kb on - strand, within MPMX20_04602 at 4820.562 kb on - strand, within MPMX20_04602 at 4820.562 kb on - strand, within MPMX20_04602 at 4820.581 kb on - strand, within MPMX20_04602 at 4820.582 kb on - strand, within MPMX20_04602 at 4820.592 kb on - strand, within MPMX20_04602 at 4820.606 kb on + strand, within MPMX20_04602 at 4820.614 kb on - strand, within MPMX20_04602 at 4820.633 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.653 kb on + strand, within MPMX20_04602 at 4820.661 kb on - strand, within MPMX20_04602 at 4820.661 kb on - strand, within MPMX20_04602 at 4820.661 kb on - strand, within MPMX20_04602 at 4820.661 kb on - strand, within MPMX20_04602 at 4820.661 kb on - strand, within MPMX20_04602 at 4820.661 kb on - strand, within MPMX20_04602 at 4820.663 kb on + strand, within MPMX20_04602 at 4820.670 kb on - strand, within MPMX20_04602 at 4820.707 kb on - strand, within MPMX20_04602 at 4820.748 kb on + strand, within MPMX20_04602
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (N) remove 4,816,824 + +0.2 4,816,832 - -0.2 4,816,832 - -0.7 4,816,897 + -1.4 4,816,897 + -3.4 4,816,949 + +0.3 4,816,957 - +0.9 4,816,972 - -3.2 4,816,982 - -3.3 4,816,982 - +1.1 4,816,982 - +0.1 4,816,987 - +0.1 4,817,138 + +0.5 4,817,166 + +0.9 4,817,341 - -2.0 4,817,498 - MPMX20_04601 0.13 -0.6 4,817,668 - MPMX20_04601 0.19 +0.9 4,817,695 - MPMX20_04601 0.20 -0.3 4,818,198 - MPMX20_04601 0.38 +0.5 4,818,939 - MPMX20_04601 0.64 -2.5 4,818,939 - MPMX20_04601 0.64 -1.6 4,818,987 - MPMX20_04601 0.66 -0.7 4,819,975 - -2.3 4,819,989 + -1.2 4,820,108 + -0.7 4,820,117 - -3.8 4,820,210 + +1.0 4,820,210 + -0.9 4,820,210 + +1.1 4,820,218 - +1.1 4,820,218 - +1.6 4,820,218 - -2.8 4,820,218 - +0.1 4,820,261 - -1.7 4,820,284 + +0.3 4,820,322 + -2.4 4,820,356 - -1.5 4,820,404 + MPMX20_04602 0.13 +1.4 4,820,430 + MPMX20_04602 0.15 +0.2 4,820,439 + MPMX20_04602 0.16 -0.1 4,820,439 + MPMX20_04602 0.16 +1.7 4,820,439 + MPMX20_04602 0.16 -0.9 4,820,439 + MPMX20_04602 0.16 -0.3 4,820,444 + MPMX20_04602 0.17 -2.1 4,820,444 + MPMX20_04602 0.17 -2.2 4,820,444 + MPMX20_04602 0.17 -0.5 4,820,447 - MPMX20_04602 0.17 -0.6 4,820,447 - MPMX20_04602 0.17 +2.9 4,820,447 - MPMX20_04602 0.17 +3.3 4,820,452 - MPMX20_04602 0.18 -2.4 4,820,452 - MPMX20_04602 0.18 +0.4 4,820,452 - MPMX20_04602 0.18 -1.0 4,820,471 + MPMX20_04602 0.19 -1.1 4,820,481 + MPMX20_04602 0.20 +0.3 4,820,549 - MPMX20_04602 0.27 -2.3 4,820,562 - MPMX20_04602 0.28 +0.4 4,820,562 - MPMX20_04602 0.28 +0.5 4,820,581 - MPMX20_04602 0.30 +2.0 4,820,582 - MPMX20_04602 0.30 -2.7 4,820,592 - MPMX20_04602 0.31 +0.5 4,820,606 + MPMX20_04602 0.33 +0.8 4,820,614 - MPMX20_04602 0.34 +0.1 4,820,633 + MPMX20_04602 0.36 +0.1 4,820,653 + MPMX20_04602 0.38 -0.3 4,820,653 + MPMX20_04602 0.38 -3.1 4,820,653 + MPMX20_04602 0.38 +0.3 4,820,653 + MPMX20_04602 0.38 -1.4 4,820,653 + MPMX20_04602 0.38 -0.4 4,820,653 + MPMX20_04602 0.38 +0.4 4,820,653 + MPMX20_04602 0.38 +0.5 4,820,653 + MPMX20_04602 0.38 +0.8 4,820,661 - MPMX20_04602 0.38 +1.3 4,820,661 - MPMX20_04602 0.38 -0.1 4,820,661 - MPMX20_04602 0.38 +1.1 4,820,661 - MPMX20_04602 0.38 +1.7 4,820,661 - MPMX20_04602 0.38 -0.1 4,820,661 - MPMX20_04602 0.38 +0.5 4,820,663 + MPMX20_04602 0.38 -0.0 4,820,670 - MPMX20_04602 0.39 +1.9 4,820,707 - MPMX20_04602 0.43 +1.5 4,820,748 + MPMX20_04602 0.47 +0.7
Or see this region's nucleotide sequence