Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04601

Experiment: D-Salicin (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04600 and MPMX20_04601 are separated by 311 nucleotidesMPMX20_04601 and MPMX20_04602 are separated by 341 nucleotides MPMX20_04600: MPMX20_04600 - putative GTP-binding protein EngB, at 4,816,200 to 4,816,829 _04600 MPMX20_04601: MPMX20_04601 - DNA polymerase I, at 4,817,141 to 4,819,933 _04601 MPMX20_04602: MPMX20_04602 - putative acyltransferase YihG, at 4,820,275 to 4,821,282 _04602 Position (kb) 4817 4818 4819 4820Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4816.824 kb on + strandat 4816.832 kb on - strandat 4816.832 kb on - strandat 4816.897 kb on + strandat 4816.897 kb on + strandat 4816.949 kb on + strandat 4816.957 kb on - strandat 4816.972 kb on - strandat 4816.982 kb on - strandat 4816.982 kb on - strandat 4816.982 kb on - strandat 4816.987 kb on - strandat 4817.138 kb on + strandat 4817.166 kb on + strandat 4817.341 kb on - strandat 4817.498 kb on - strand, within MPMX20_04601at 4817.668 kb on - strand, within MPMX20_04601at 4817.695 kb on - strand, within MPMX20_04601at 4818.198 kb on - strand, within MPMX20_04601at 4818.939 kb on - strand, within MPMX20_04601at 4818.939 kb on - strand, within MPMX20_04601at 4818.987 kb on - strand, within MPMX20_04601at 4819.975 kb on - strandat 4819.989 kb on + strandat 4820.108 kb on + strandat 4820.117 kb on - strandat 4820.210 kb on + strandat 4820.210 kb on + strandat 4820.210 kb on + strandat 4820.218 kb on - strandat 4820.218 kb on - strandat 4820.218 kb on - strandat 4820.218 kb on - strandat 4820.261 kb on - strandat 4820.284 kb on + strandat 4820.322 kb on + strandat 4820.356 kb on - strandat 4820.404 kb on + strand, within MPMX20_04602at 4820.430 kb on + strand, within MPMX20_04602at 4820.439 kb on + strand, within MPMX20_04602at 4820.439 kb on + strand, within MPMX20_04602at 4820.439 kb on + strand, within MPMX20_04602at 4820.439 kb on + strand, within MPMX20_04602at 4820.444 kb on + strand, within MPMX20_04602at 4820.444 kb on + strand, within MPMX20_04602at 4820.444 kb on + strand, within MPMX20_04602at 4820.447 kb on - strand, within MPMX20_04602at 4820.447 kb on - strand, within MPMX20_04602at 4820.447 kb on - strand, within MPMX20_04602at 4820.452 kb on - strand, within MPMX20_04602at 4820.452 kb on - strand, within MPMX20_04602at 4820.452 kb on - strand, within MPMX20_04602at 4820.471 kb on + strand, within MPMX20_04602at 4820.481 kb on + strand, within MPMX20_04602at 4820.549 kb on - strand, within MPMX20_04602at 4820.562 kb on - strand, within MPMX20_04602at 4820.562 kb on - strand, within MPMX20_04602at 4820.581 kb on - strand, within MPMX20_04602at 4820.582 kb on - strand, within MPMX20_04602at 4820.592 kb on - strand, within MPMX20_04602at 4820.606 kb on + strand, within MPMX20_04602at 4820.614 kb on - strand, within MPMX20_04602at 4820.633 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.653 kb on + strand, within MPMX20_04602at 4820.661 kb on - strand, within MPMX20_04602at 4820.661 kb on - strand, within MPMX20_04602at 4820.661 kb on - strand, within MPMX20_04602at 4820.661 kb on - strand, within MPMX20_04602at 4820.661 kb on - strand, within MPMX20_04602at 4820.661 kb on - strand, within MPMX20_04602at 4820.663 kb on + strand, within MPMX20_04602at 4820.670 kb on - strand, within MPMX20_04602at 4820.707 kb on - strand, within MPMX20_04602at 4820.748 kb on + strand, within MPMX20_04602

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (N)
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4,816,824 + +0.2
4,816,832 - -0.2
4,816,832 - -0.7
4,816,897 + -1.4
4,816,897 + -3.4
4,816,949 + +0.3
4,816,957 - +0.9
4,816,972 - -3.2
4,816,982 - -3.3
4,816,982 - +1.1
4,816,982 - +0.1
4,816,987 - +0.1
4,817,138 + +0.5
4,817,166 + +0.9
4,817,341 - -2.0
4,817,498 - MPMX20_04601 0.13 -0.6
4,817,668 - MPMX20_04601 0.19 +0.9
4,817,695 - MPMX20_04601 0.20 -0.3
4,818,198 - MPMX20_04601 0.38 +0.5
4,818,939 - MPMX20_04601 0.64 -2.5
4,818,939 - MPMX20_04601 0.64 -1.6
4,818,987 - MPMX20_04601 0.66 -0.7
4,819,975 - -2.3
4,819,989 + -1.2
4,820,108 + -0.7
4,820,117 - -3.8
4,820,210 + +1.0
4,820,210 + -0.9
4,820,210 + +1.1
4,820,218 - +1.1
4,820,218 - +1.6
4,820,218 - -2.8
4,820,218 - +0.1
4,820,261 - -1.7
4,820,284 + +0.3
4,820,322 + -2.4
4,820,356 - -1.5
4,820,404 + MPMX20_04602 0.13 +1.4
4,820,430 + MPMX20_04602 0.15 +0.2
4,820,439 + MPMX20_04602 0.16 -0.1
4,820,439 + MPMX20_04602 0.16 +1.7
4,820,439 + MPMX20_04602 0.16 -0.9
4,820,439 + MPMX20_04602 0.16 -0.3
4,820,444 + MPMX20_04602 0.17 -2.1
4,820,444 + MPMX20_04602 0.17 -2.2
4,820,444 + MPMX20_04602 0.17 -0.5
4,820,447 - MPMX20_04602 0.17 -0.6
4,820,447 - MPMX20_04602 0.17 +2.9
4,820,447 - MPMX20_04602 0.17 +3.3
4,820,452 - MPMX20_04602 0.18 -2.4
4,820,452 - MPMX20_04602 0.18 +0.4
4,820,452 - MPMX20_04602 0.18 -1.0
4,820,471 + MPMX20_04602 0.19 -1.1
4,820,481 + MPMX20_04602 0.20 +0.3
4,820,549 - MPMX20_04602 0.27 -2.3
4,820,562 - MPMX20_04602 0.28 +0.4
4,820,562 - MPMX20_04602 0.28 +0.5
4,820,581 - MPMX20_04602 0.30 +2.0
4,820,582 - MPMX20_04602 0.30 -2.7
4,820,592 - MPMX20_04602 0.31 +0.5
4,820,606 + MPMX20_04602 0.33 +0.8
4,820,614 - MPMX20_04602 0.34 +0.1
4,820,633 + MPMX20_04602 0.36 +0.1
4,820,653 + MPMX20_04602 0.38 -0.3
4,820,653 + MPMX20_04602 0.38 -3.1
4,820,653 + MPMX20_04602 0.38 +0.3
4,820,653 + MPMX20_04602 0.38 -1.4
4,820,653 + MPMX20_04602 0.38 -0.4
4,820,653 + MPMX20_04602 0.38 +0.4
4,820,653 + MPMX20_04602 0.38 +0.5
4,820,653 + MPMX20_04602 0.38 +0.8
4,820,661 - MPMX20_04602 0.38 +1.3
4,820,661 - MPMX20_04602 0.38 -0.1
4,820,661 - MPMX20_04602 0.38 +1.1
4,820,661 - MPMX20_04602 0.38 +1.7
4,820,661 - MPMX20_04602 0.38 -0.1
4,820,661 - MPMX20_04602 0.38 +0.5
4,820,663 + MPMX20_04602 0.38 -0.0
4,820,670 - MPMX20_04602 0.39 +1.9
4,820,707 - MPMX20_04602 0.43 +1.5
4,820,748 + MPMX20_04602 0.47 +0.7

Or see this region's nucleotide sequence