Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03032

Experiment: Cytosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03031 and MPMX20_03032 are separated by 3 nucleotidesMPMX20_03032 and MPMX20_03033 overlap by 4 nucleotidesMPMX20_03033 and MPMX20_03034 overlap by 1 nucleotides MPMX20_03031: MPMX20_03031 - Mannose-1-phosphate guanylyltransferase 1, at 3,169,005 to 3,170,441 _03031 MPMX20_03032: MPMX20_03032 - hypothetical protein, at 3,170,445 to 3,171,668 _03032 MPMX20_03033: MPMX20_03033 - GDP-mannose mannosyl hydrolase, at 3,171,665 to 3,172,147 _03033 MPMX20_03034: MPMX20_03034 - GDP-L-fucose synthase, at 3,172,147 to 3,173,112 _03034 Position (kb) 3170 3171 3172Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3169.464 kb on + strand, within MPMX20_03031at 3169.477 kb on - strand, within MPMX20_03031at 3169.549 kb on + strand, within MPMX20_03031at 3169.549 kb on + strand, within MPMX20_03031at 3169.557 kb on - strand, within MPMX20_03031at 3169.646 kb on - strand, within MPMX20_03031at 3169.668 kb on + strand, within MPMX20_03031at 3169.689 kb on + strand, within MPMX20_03031at 3169.697 kb on - strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.796 kb on + strand, within MPMX20_03031at 3169.804 kb on - strand, within MPMX20_03031at 3169.804 kb on - strand, within MPMX20_03031at 3169.804 kb on - strand, within MPMX20_03031at 3169.813 kb on + strand, within MPMX20_03031at 3169.852 kb on + strand, within MPMX20_03031at 3169.861 kb on + strand, within MPMX20_03031at 3169.865 kb on - strand, within MPMX20_03031at 3169.930 kb on + strand, within MPMX20_03031at 3169.940 kb on + strand, within MPMX20_03031at 3169.986 kb on + strand, within MPMX20_03031at 3170.248 kb on - strand, within MPMX20_03031at 3170.286 kb on + strand, within MPMX20_03031at 3170.294 kb on - strand, within MPMX20_03031at 3170.302 kb on + strandat 3170.314 kb on + strandat 3170.451 kb on + strandat 3170.532 kb on - strandat 3170.631 kb on + strand, within MPMX20_03032at 3170.631 kb on + strand, within MPMX20_03032at 3170.696 kb on + strand, within MPMX20_03032at 3170.696 kb on + strand, within MPMX20_03032at 3170.696 kb on + strand, within MPMX20_03032at 3170.704 kb on - strand, within MPMX20_03032at 3170.722 kb on - strand, within MPMX20_03032at 3170.741 kb on + strand, within MPMX20_03032at 3170.741 kb on + strand, within MPMX20_03032at 3170.939 kb on + strand, within MPMX20_03032at 3170.957 kb on - strand, within MPMX20_03032at 3171.004 kb on + strand, within MPMX20_03032at 3171.012 kb on - strand, within MPMX20_03032at 3171.012 kb on - strand, within MPMX20_03032at 3171.026 kb on + strand, within MPMX20_03032at 3171.032 kb on - strand, within MPMX20_03032at 3171.102 kb on - strand, within MPMX20_03032at 3171.102 kb on - strand, within MPMX20_03032at 3171.102 kb on - strand, within MPMX20_03032at 3171.132 kb on + strand, within MPMX20_03032at 3171.161 kb on - strand, within MPMX20_03032at 3171.288 kb on - strand, within MPMX20_03032at 3171.305 kb on + strand, within MPMX20_03032at 3171.313 kb on + strand, within MPMX20_03032at 3171.313 kb on - strand, within MPMX20_03032at 3171.313 kb on - strand, within MPMX20_03032at 3171.321 kb on - strand, within MPMX20_03032at 3171.321 kb on - strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.395 kb on + strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.403 kb on - strand, within MPMX20_03032at 3171.448 kb on - strand, within MPMX20_03032at 3171.470 kb on - strand, within MPMX20_03032at 3171.508 kb on + strand, within MPMX20_03032at 3171.561 kb on - strandat 3171.564 kb on + strandat 3171.572 kb on - strandat 3171.609 kb on + strandat 3171.683 kb on + strandat 3171.686 kb on - strandat 3171.686 kb on - strandat 3171.687 kb on - strandat 3171.691 kb on - strandat 3171.783 kb on + strand, within MPMX20_03033at 3171.786 kb on - strand, within MPMX20_03033at 3171.897 kb on + strand, within MPMX20_03033at 3171.897 kb on + strand, within MPMX20_03033at 3171.897 kb on + strand, within MPMX20_03033at 3171.897 kb on - strand, within MPMX20_03033at 3171.939 kb on - strand, within MPMX20_03033at 3172.016 kb on + strand, within MPMX20_03033at 3172.021 kb on + strand, within MPMX20_03033at 3172.021 kb on + strand, within MPMX20_03033at 3172.086 kb on + strand, within MPMX20_03033at 3172.086 kb on + strand, within MPMX20_03033at 3172.099 kb on + strandat 3172.175 kb on - strandat 3172.188 kb on - strandat 3172.209 kb on - strandat 3172.220 kb on - strandat 3172.226 kb on + strandat 3172.247 kb on - strand, within MPMX20_03034at 3172.253 kb on - strand, within MPMX20_03034at 3172.302 kb on - strand, within MPMX20_03034at 3172.319 kb on + strand, within MPMX20_03034at 3172.329 kb on + strand, within MPMX20_03034at 3172.336 kb on + strand, within MPMX20_03034at 3172.336 kb on + strand, within MPMX20_03034at 3172.363 kb on + strand, within MPMX20_03034at 3172.368 kb on + strand, within MPMX20_03034at 3172.371 kb on - strand, within MPMX20_03034at 3172.387 kb on - strand, within MPMX20_03034at 3172.387 kb on - strand, within MPMX20_03034at 3172.504 kb on + strand, within MPMX20_03034at 3172.504 kb on + strand, within MPMX20_03034at 3172.512 kb on - strand, within MPMX20_03034at 3172.571 kb on - strand, within MPMX20_03034at 3172.590 kb on + strand, within MPMX20_03034at 3172.598 kb on - strand, within MPMX20_03034at 3172.646 kb on + strand, within MPMX20_03034at 3172.646 kb on + strand, within MPMX20_03034

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytosine (N)
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3,169,464 + MPMX20_03031 0.32 +0.3
3,169,477 - MPMX20_03031 0.33 +1.0
3,169,549 + MPMX20_03031 0.38 -0.1
3,169,549 + MPMX20_03031 0.38 +0.8
3,169,557 - MPMX20_03031 0.38 +1.1
3,169,646 - MPMX20_03031 0.45 +0.6
3,169,668 + MPMX20_03031 0.46 +1.1
3,169,689 + MPMX20_03031 0.48 -0.3
3,169,697 - MPMX20_03031 0.48 +0.8
3,169,796 + MPMX20_03031 0.55 +0.3
3,169,796 + MPMX20_03031 0.55 +0.2
3,169,796 + MPMX20_03031 0.55 -0.5
3,169,796 + MPMX20_03031 0.55 +0.5
3,169,804 - MPMX20_03031 0.56 +0.4
3,169,804 - MPMX20_03031 0.56 -0.7
3,169,804 - MPMX20_03031 0.56 +0.9
3,169,813 + MPMX20_03031 0.56 +1.0
3,169,852 + MPMX20_03031 0.59 -0.6
3,169,861 + MPMX20_03031 0.60 +0.3
3,169,865 - MPMX20_03031 0.60 -0.3
3,169,930 + MPMX20_03031 0.64 -0.3
3,169,940 + MPMX20_03031 0.65 +2.7
3,169,986 + MPMX20_03031 0.68 -0.3
3,170,248 - MPMX20_03031 0.86 +0.4
3,170,286 + MPMX20_03031 0.89 +1.0
3,170,294 - MPMX20_03031 0.90 +0.4
3,170,302 + +0.8
3,170,314 + +1.6
3,170,451 + +0.4
3,170,532 - -0.9
3,170,631 + MPMX20_03032 0.15 +2.9
3,170,631 + MPMX20_03032 0.15 +1.5
3,170,696 + MPMX20_03032 0.21 +0.3
3,170,696 + MPMX20_03032 0.21 +1.4
3,170,696 + MPMX20_03032 0.21 -1.1
3,170,704 - MPMX20_03032 0.21 -0.1
3,170,722 - MPMX20_03032 0.23 -2.2
3,170,741 + MPMX20_03032 0.24 -0.2
3,170,741 + MPMX20_03032 0.24 -1.5
3,170,939 + MPMX20_03032 0.40 +2.6
3,170,957 - MPMX20_03032 0.42 -2.0
3,171,004 + MPMX20_03032 0.46 +0.6
3,171,012 - MPMX20_03032 0.46 +0.6
3,171,012 - MPMX20_03032 0.46 -0.5
3,171,026 + MPMX20_03032 0.47 +0.4
3,171,032 - MPMX20_03032 0.48 +0.6
3,171,102 - MPMX20_03032 0.54 +2.0
3,171,102 - MPMX20_03032 0.54 -0.9
3,171,102 - MPMX20_03032 0.54 +1.2
3,171,132 + MPMX20_03032 0.56 +0.6
3,171,161 - MPMX20_03032 0.58 -0.4
3,171,288 - MPMX20_03032 0.69 +0.0
3,171,305 + MPMX20_03032 0.70 +0.4
3,171,313 + MPMX20_03032 0.71 -0.5
3,171,313 - MPMX20_03032 0.71 +0.6
3,171,313 - MPMX20_03032 0.71 -1.1
3,171,321 - MPMX20_03032 0.72 -0.4
3,171,321 - MPMX20_03032 0.72 -1.5
3,171,395 + MPMX20_03032 0.78 -0.7
3,171,395 + MPMX20_03032 0.78 +0.0
3,171,395 + MPMX20_03032 0.78 +1.5
3,171,395 + MPMX20_03032 0.78 -1.4
3,171,395 + MPMX20_03032 0.78 +1.5
3,171,395 + MPMX20_03032 0.78 -0.9
3,171,403 - MPMX20_03032 0.78 +0.1
3,171,403 - MPMX20_03032 0.78 +0.7
3,171,403 - MPMX20_03032 0.78 -0.1
3,171,403 - MPMX20_03032 0.78 -0.6
3,171,403 - MPMX20_03032 0.78 -0.1
3,171,448 - MPMX20_03032 0.82 +1.1
3,171,470 - MPMX20_03032 0.84 -0.9
3,171,508 + MPMX20_03032 0.87 -0.7
3,171,561 - +1.3
3,171,564 + -1.2
3,171,572 - +0.1
3,171,609 + +0.9
3,171,683 + +0.4
3,171,686 - -0.9
3,171,686 - -0.1
3,171,687 - +0.4
3,171,691 - +0.1
3,171,783 + MPMX20_03033 0.24 +1.0
3,171,786 - MPMX20_03033 0.25 -0.0
3,171,897 + MPMX20_03033 0.48 +1.4
3,171,897 + MPMX20_03033 0.48 -0.2
3,171,897 + MPMX20_03033 0.48 +1.7
3,171,897 - MPMX20_03033 0.48 -0.7
3,171,939 - MPMX20_03033 0.57 -0.8
3,172,016 + MPMX20_03033 0.73 +2.7
3,172,021 + MPMX20_03033 0.74 +2.3
3,172,021 + MPMX20_03033 0.74 +0.5
3,172,086 + MPMX20_03033 0.87 +0.1
3,172,086 + MPMX20_03033 0.87 +1.2
3,172,099 + +0.5
3,172,175 - +0.3
3,172,188 - +1.0
3,172,209 - -0.9
3,172,220 - -1.1
3,172,226 + +0.9
3,172,247 - MPMX20_03034 0.10 -0.9
3,172,253 - MPMX20_03034 0.11 -0.5
3,172,302 - MPMX20_03034 0.16 -2.6
3,172,319 + MPMX20_03034 0.18 -1.7
3,172,329 + MPMX20_03034 0.19 -2.5
3,172,336 + MPMX20_03034 0.20 +0.8
3,172,336 + MPMX20_03034 0.20 -0.5
3,172,363 + MPMX20_03034 0.22 -1.5
3,172,368 + MPMX20_03034 0.23 -0.8
3,172,371 - MPMX20_03034 0.23 -2.0
3,172,387 - MPMX20_03034 0.25 -0.5
3,172,387 - MPMX20_03034 0.25 -1.8
3,172,504 + MPMX20_03034 0.37 -0.0
3,172,504 + MPMX20_03034 0.37 -1.4
3,172,512 - MPMX20_03034 0.38 +1.0
3,172,571 - MPMX20_03034 0.44 -0.9
3,172,590 + MPMX20_03034 0.46 -0.2
3,172,598 - MPMX20_03034 0.47 +0.0
3,172,646 + MPMX20_03034 0.52 -2.2
3,172,646 + MPMX20_03034 0.52 -1.3

Or see this region's nucleotide sequence