Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03031 and MPMX20_03032 are separated by 3 nucleotides MPMX20_03032 and MPMX20_03033 overlap by 4 nucleotides MPMX20_03033 and MPMX20_03034 overlap by 1 nucleotides
MPMX20_03031: MPMX20_03031 - Mannose-1-phosphate guanylyltransferase 1, at 3,169,005 to 3,170,441
_03031
MPMX20_03032: MPMX20_03032 - hypothetical protein, at 3,170,445 to 3,171,668
_03032
MPMX20_03033: MPMX20_03033 - GDP-mannose mannosyl hydrolase, at 3,171,665 to 3,172,147
_03033
MPMX20_03034: MPMX20_03034 - GDP-L-fucose synthase, at 3,172,147 to 3,173,112
_03034
Position (kb)
3170
3171
3172 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3169.464 kb on + strand, within MPMX20_03031 at 3169.477 kb on - strand, within MPMX20_03031 at 3169.549 kb on + strand, within MPMX20_03031 at 3169.549 kb on + strand, within MPMX20_03031 at 3169.557 kb on - strand, within MPMX20_03031 at 3169.646 kb on - strand, within MPMX20_03031 at 3169.668 kb on + strand, within MPMX20_03031 at 3169.689 kb on + strand, within MPMX20_03031 at 3169.697 kb on - strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.796 kb on + strand, within MPMX20_03031 at 3169.804 kb on - strand, within MPMX20_03031 at 3169.804 kb on - strand, within MPMX20_03031 at 3169.804 kb on - strand, within MPMX20_03031 at 3169.813 kb on + strand, within MPMX20_03031 at 3169.852 kb on + strand, within MPMX20_03031 at 3169.861 kb on + strand, within MPMX20_03031 at 3169.865 kb on - strand, within MPMX20_03031 at 3169.930 kb on + strand, within MPMX20_03031 at 3169.940 kb on + strand, within MPMX20_03031 at 3169.986 kb on + strand, within MPMX20_03031 at 3170.248 kb on - strand, within MPMX20_03031 at 3170.286 kb on + strand, within MPMX20_03031 at 3170.294 kb on - strand, within MPMX20_03031 at 3170.302 kb on + strand at 3170.314 kb on + strand at 3170.451 kb on + strand at 3170.532 kb on - strand at 3170.631 kb on + strand, within MPMX20_03032 at 3170.631 kb on + strand, within MPMX20_03032 at 3170.696 kb on + strand, within MPMX20_03032 at 3170.696 kb on + strand, within MPMX20_03032 at 3170.696 kb on + strand, within MPMX20_03032 at 3170.704 kb on - strand, within MPMX20_03032 at 3170.722 kb on - strand, within MPMX20_03032 at 3170.741 kb on + strand, within MPMX20_03032 at 3170.741 kb on + strand, within MPMX20_03032 at 3170.939 kb on + strand, within MPMX20_03032 at 3170.957 kb on - strand, within MPMX20_03032 at 3171.004 kb on + strand, within MPMX20_03032 at 3171.012 kb on - strand, within MPMX20_03032 at 3171.012 kb on - strand, within MPMX20_03032 at 3171.026 kb on + strand, within MPMX20_03032 at 3171.032 kb on - strand, within MPMX20_03032 at 3171.102 kb on - strand, within MPMX20_03032 at 3171.102 kb on - strand, within MPMX20_03032 at 3171.102 kb on - strand, within MPMX20_03032 at 3171.132 kb on + strand, within MPMX20_03032 at 3171.161 kb on - strand, within MPMX20_03032 at 3171.288 kb on - strand, within MPMX20_03032 at 3171.305 kb on + strand, within MPMX20_03032 at 3171.313 kb on + strand, within MPMX20_03032 at 3171.313 kb on - strand, within MPMX20_03032 at 3171.313 kb on - strand, within MPMX20_03032 at 3171.321 kb on - strand, within MPMX20_03032 at 3171.321 kb on - strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.395 kb on + strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.403 kb on - strand, within MPMX20_03032 at 3171.448 kb on - strand, within MPMX20_03032 at 3171.470 kb on - strand, within MPMX20_03032 at 3171.508 kb on + strand, within MPMX20_03032 at 3171.561 kb on - strand at 3171.564 kb on + strand at 3171.572 kb on - strand at 3171.609 kb on + strand at 3171.683 kb on + strand at 3171.686 kb on - strand at 3171.686 kb on - strand at 3171.687 kb on - strand at 3171.691 kb on - strand at 3171.783 kb on + strand, within MPMX20_03033 at 3171.786 kb on - strand, within MPMX20_03033 at 3171.897 kb on + strand, within MPMX20_03033 at 3171.897 kb on + strand, within MPMX20_03033 at 3171.897 kb on + strand, within MPMX20_03033 at 3171.897 kb on - strand, within MPMX20_03033 at 3171.939 kb on - strand, within MPMX20_03033 at 3172.016 kb on + strand, within MPMX20_03033 at 3172.021 kb on + strand, within MPMX20_03033 at 3172.021 kb on + strand, within MPMX20_03033 at 3172.086 kb on + strand, within MPMX20_03033 at 3172.086 kb on + strand, within MPMX20_03033 at 3172.099 kb on + strand at 3172.175 kb on - strand at 3172.188 kb on - strand at 3172.209 kb on - strand at 3172.220 kb on - strand at 3172.226 kb on + strand at 3172.247 kb on - strand, within MPMX20_03034 at 3172.253 kb on - strand, within MPMX20_03034 at 3172.302 kb on - strand, within MPMX20_03034 at 3172.319 kb on + strand, within MPMX20_03034 at 3172.329 kb on + strand, within MPMX20_03034 at 3172.336 kb on + strand, within MPMX20_03034 at 3172.336 kb on + strand, within MPMX20_03034 at 3172.363 kb on + strand, within MPMX20_03034 at 3172.368 kb on + strand, within MPMX20_03034 at 3172.371 kb on - strand, within MPMX20_03034 at 3172.387 kb on - strand, within MPMX20_03034 at 3172.387 kb on - strand, within MPMX20_03034 at 3172.504 kb on + strand, within MPMX20_03034 at 3172.504 kb on + strand, within MPMX20_03034 at 3172.512 kb on - strand, within MPMX20_03034 at 3172.571 kb on - strand, within MPMX20_03034 at 3172.590 kb on + strand, within MPMX20_03034 at 3172.598 kb on - strand, within MPMX20_03034 at 3172.646 kb on + strand, within MPMX20_03034 at 3172.646 kb on + strand, within MPMX20_03034
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 3,169,464 + MPMX20_03031 0.32 +0.3 3,169,477 - MPMX20_03031 0.33 +1.0 3,169,549 + MPMX20_03031 0.38 -0.1 3,169,549 + MPMX20_03031 0.38 +0.8 3,169,557 - MPMX20_03031 0.38 +1.1 3,169,646 - MPMX20_03031 0.45 +0.6 3,169,668 + MPMX20_03031 0.46 +1.1 3,169,689 + MPMX20_03031 0.48 -0.3 3,169,697 - MPMX20_03031 0.48 +0.8 3,169,796 + MPMX20_03031 0.55 +0.3 3,169,796 + MPMX20_03031 0.55 +0.2 3,169,796 + MPMX20_03031 0.55 -0.5 3,169,796 + MPMX20_03031 0.55 +0.5 3,169,804 - MPMX20_03031 0.56 +0.4 3,169,804 - MPMX20_03031 0.56 -0.7 3,169,804 - MPMX20_03031 0.56 +0.9 3,169,813 + MPMX20_03031 0.56 +1.0 3,169,852 + MPMX20_03031 0.59 -0.6 3,169,861 + MPMX20_03031 0.60 +0.3 3,169,865 - MPMX20_03031 0.60 -0.3 3,169,930 + MPMX20_03031 0.64 -0.3 3,169,940 + MPMX20_03031 0.65 +2.7 3,169,986 + MPMX20_03031 0.68 -0.3 3,170,248 - MPMX20_03031 0.86 +0.4 3,170,286 + MPMX20_03031 0.89 +1.0 3,170,294 - MPMX20_03031 0.90 +0.4 3,170,302 + +0.8 3,170,314 + +1.6 3,170,451 + +0.4 3,170,532 - -0.9 3,170,631 + MPMX20_03032 0.15 +2.9 3,170,631 + MPMX20_03032 0.15 +1.5 3,170,696 + MPMX20_03032 0.21 +0.3 3,170,696 + MPMX20_03032 0.21 +1.4 3,170,696 + MPMX20_03032 0.21 -1.1 3,170,704 - MPMX20_03032 0.21 -0.1 3,170,722 - MPMX20_03032 0.23 -2.2 3,170,741 + MPMX20_03032 0.24 -0.2 3,170,741 + MPMX20_03032 0.24 -1.5 3,170,939 + MPMX20_03032 0.40 +2.6 3,170,957 - MPMX20_03032 0.42 -2.0 3,171,004 + MPMX20_03032 0.46 +0.6 3,171,012 - MPMX20_03032 0.46 +0.6 3,171,012 - MPMX20_03032 0.46 -0.5 3,171,026 + MPMX20_03032 0.47 +0.4 3,171,032 - MPMX20_03032 0.48 +0.6 3,171,102 - MPMX20_03032 0.54 +2.0 3,171,102 - MPMX20_03032 0.54 -0.9 3,171,102 - MPMX20_03032 0.54 +1.2 3,171,132 + MPMX20_03032 0.56 +0.6 3,171,161 - MPMX20_03032 0.58 -0.4 3,171,288 - MPMX20_03032 0.69 +0.0 3,171,305 + MPMX20_03032 0.70 +0.4 3,171,313 + MPMX20_03032 0.71 -0.5 3,171,313 - MPMX20_03032 0.71 +0.6 3,171,313 - MPMX20_03032 0.71 -1.1 3,171,321 - MPMX20_03032 0.72 -0.4 3,171,321 - MPMX20_03032 0.72 -1.5 3,171,395 + MPMX20_03032 0.78 -0.7 3,171,395 + MPMX20_03032 0.78 +0.0 3,171,395 + MPMX20_03032 0.78 +1.5 3,171,395 + MPMX20_03032 0.78 -1.4 3,171,395 + MPMX20_03032 0.78 +1.5 3,171,395 + MPMX20_03032 0.78 -0.9 3,171,403 - MPMX20_03032 0.78 +0.1 3,171,403 - MPMX20_03032 0.78 +0.7 3,171,403 - MPMX20_03032 0.78 -0.1 3,171,403 - MPMX20_03032 0.78 -0.6 3,171,403 - MPMX20_03032 0.78 -0.1 3,171,448 - MPMX20_03032 0.82 +1.1 3,171,470 - MPMX20_03032 0.84 -0.9 3,171,508 + MPMX20_03032 0.87 -0.7 3,171,561 - +1.3 3,171,564 + -1.2 3,171,572 - +0.1 3,171,609 + +0.9 3,171,683 + +0.4 3,171,686 - -0.9 3,171,686 - -0.1 3,171,687 - +0.4 3,171,691 - +0.1 3,171,783 + MPMX20_03033 0.24 +1.0 3,171,786 - MPMX20_03033 0.25 -0.0 3,171,897 + MPMX20_03033 0.48 +1.4 3,171,897 + MPMX20_03033 0.48 -0.2 3,171,897 + MPMX20_03033 0.48 +1.7 3,171,897 - MPMX20_03033 0.48 -0.7 3,171,939 - MPMX20_03033 0.57 -0.8 3,172,016 + MPMX20_03033 0.73 +2.7 3,172,021 + MPMX20_03033 0.74 +2.3 3,172,021 + MPMX20_03033 0.74 +0.5 3,172,086 + MPMX20_03033 0.87 +0.1 3,172,086 + MPMX20_03033 0.87 +1.2 3,172,099 + +0.5 3,172,175 - +0.3 3,172,188 - +1.0 3,172,209 - -0.9 3,172,220 - -1.1 3,172,226 + +0.9 3,172,247 - MPMX20_03034 0.10 -0.9 3,172,253 - MPMX20_03034 0.11 -0.5 3,172,302 - MPMX20_03034 0.16 -2.6 3,172,319 + MPMX20_03034 0.18 -1.7 3,172,329 + MPMX20_03034 0.19 -2.5 3,172,336 + MPMX20_03034 0.20 +0.8 3,172,336 + MPMX20_03034 0.20 -0.5 3,172,363 + MPMX20_03034 0.22 -1.5 3,172,368 + MPMX20_03034 0.23 -0.8 3,172,371 - MPMX20_03034 0.23 -2.0 3,172,387 - MPMX20_03034 0.25 -0.5 3,172,387 - MPMX20_03034 0.25 -1.8 3,172,504 + MPMX20_03034 0.37 -0.0 3,172,504 + MPMX20_03034 0.37 -1.4 3,172,512 - MPMX20_03034 0.38 +1.0 3,172,571 - MPMX20_03034 0.44 -0.9 3,172,590 + MPMX20_03034 0.46 -0.2 3,172,598 - MPMX20_03034 0.47 +0.0 3,172,646 + MPMX20_03034 0.52 -2.2 3,172,646 + MPMX20_03034 0.52 -1.3
Or see this region's nucleotide sequence