Experiment: Thymine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03262 and MPMX20_03263 overlap by 1 nucleotides MPMX20_03263 and MPMX20_03264 are separated by 2 nucleotides MPMX20_03264 and MPMX20_03265 are separated by 60 nucleotides
MPMX20_03262: MPMX20_03262 - putative membrane transporter protein YfcA, at 3,432,650 to 3,433,459
_03262
MPMX20_03263: MPMX20_03263 - Penicillin-insensitive murein endopeptidase, at 3,433,459 to 3,434,283
_03263
MPMX20_03264: MPMX20_03264 - Chorismate synthase, at 3,434,286 to 3,435,371
_03264
MPMX20_03265: MPMX20_03265 - 50S ribosomal protein L3 glutamine methyltransferase, at 3,435,432 to 3,436,364
_03265
Position (kb)
3434
3435
3436 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3433.287 kb on - strand, within MPMX20_03262 at 3433.287 kb on - strand, within MPMX20_03262 at 3433.516 kb on + strand at 3433.526 kb on + strand at 3433.526 kb on + strand at 3433.527 kb on + strand at 3433.534 kb on - strand at 3433.534 kb on - strand at 3433.535 kb on - strand at 3433.551 kb on + strand, within MPMX20_03263 at 3433.569 kb on + strand, within MPMX20_03263 at 3433.582 kb on + strand, within MPMX20_03263 at 3433.639 kb on + strand, within MPMX20_03263 at 3433.667 kb on + strand, within MPMX20_03263 at 3433.668 kb on + strand, within MPMX20_03263 at 3433.787 kb on + strand, within MPMX20_03263 at 3433.961 kb on + strand, within MPMX20_03263 at 3434.004 kb on + strand, within MPMX20_03263 at 3434.016 kb on + strand, within MPMX20_03263 at 3434.024 kb on - strand, within MPMX20_03263 at 3434.024 kb on - strand, within MPMX20_03263 at 3434.024 kb on - strand, within MPMX20_03263 at 3434.046 kb on - strand, within MPMX20_03263 at 3434.059 kb on + strand, within MPMX20_03263 at 3434.122 kb on - strand, within MPMX20_03263 at 3434.133 kb on - strand, within MPMX20_03263 at 3434.148 kb on + strand, within MPMX20_03263 at 3434.156 kb on - strand, within MPMX20_03263 at 3434.210 kb on - strand at 3434.253 kb on - strand at 3434.474 kb on + strand, within MPMX20_03264 at 3434.489 kb on - strand, within MPMX20_03264 at 3434.530 kb on - strand, within MPMX20_03264 at 3434.612 kb on + strand, within MPMX20_03264 at 3434.810 kb on + strand, within MPMX20_03264 at 3435.050 kb on - strand, within MPMX20_03264 at 3435.063 kb on - strand, within MPMX20_03264 at 3435.093 kb on - strand, within MPMX20_03264 at 3435.125 kb on + strand, within MPMX20_03264 at 3435.133 kb on - strand, within MPMX20_03264 at 3435.133 kb on - strand, within MPMX20_03264 at 3435.224 kb on + strand, within MPMX20_03264 at 3435.233 kb on + strand, within MPMX20_03264 at 3435.266 kb on + strand at 3435.300 kb on + strand at 3435.305 kb on + strand at 3435.305 kb on + strand at 3435.305 kb on + strand at 3435.305 kb on + strand at 3435.305 kb on + strand at 3435.308 kb on - strand at 3435.308 kb on - strand at 3435.308 kb on - strand at 3435.313 kb on - strand at 3435.313 kb on - strand at 3435.313 kb on - strand at 3435.313 kb on - strand at 3435.350 kb on + strand at 3435.358 kb on - strand at 3435.368 kb on - strand at 3435.376 kb on + strand at 3435.395 kb on + strand at 3435.413 kb on - strand at 3435.437 kb on - strand at 3435.479 kb on - strand at 3435.541 kb on + strand, within MPMX20_03265 at 3435.579 kb on - strand, within MPMX20_03265 at 3435.589 kb on - strand, within MPMX20_03265 at 3435.627 kb on + strand, within MPMX20_03265 at 3435.799 kb on - strand, within MPMX20_03265 at 3435.799 kb on - strand, within MPMX20_03265 at 3435.809 kb on - strand, within MPMX20_03265 at 3435.833 kb on + strand, within MPMX20_03265 at 3435.833 kb on + strand, within MPMX20_03265 at 3435.833 kb on + strand, within MPMX20_03265 at 3435.906 kb on + strand, within MPMX20_03265 at 3436.048 kb on + strand, within MPMX20_03265 at 3436.049 kb on + strand, within MPMX20_03265 at 3436.076 kb on - strand, within MPMX20_03265 at 3436.109 kb on + strand, within MPMX20_03265 at 3436.158 kb on + strand, within MPMX20_03265 at 3436.158 kb on + strand, within MPMX20_03265 at 3436.171 kb on + strand, within MPMX20_03265 at 3436.245 kb on - strand, within MPMX20_03265 at 3436.313 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine (N) remove 3,433,287 - MPMX20_03262 0.79 +0.7 3,433,287 - MPMX20_03262 0.79 -0.3 3,433,516 + -0.7 3,433,526 + +0.2 3,433,526 + +0.9 3,433,527 + +1.9 3,433,534 - +0.5 3,433,534 - +0.4 3,433,535 - -0.0 3,433,551 + MPMX20_03263 0.11 +0.8 3,433,569 + MPMX20_03263 0.13 +0.7 3,433,582 + MPMX20_03263 0.15 -0.5 3,433,639 + MPMX20_03263 0.22 -0.4 3,433,667 + MPMX20_03263 0.25 -0.2 3,433,668 + MPMX20_03263 0.25 +0.0 3,433,787 + MPMX20_03263 0.40 +0.3 3,433,961 + MPMX20_03263 0.61 -0.1 3,434,004 + MPMX20_03263 0.66 +0.9 3,434,016 + MPMX20_03263 0.68 +0.4 3,434,024 - MPMX20_03263 0.68 -0.3 3,434,024 - MPMX20_03263 0.68 +0.1 3,434,024 - MPMX20_03263 0.68 +1.0 3,434,046 - MPMX20_03263 0.71 -0.1 3,434,059 + MPMX20_03263 0.73 +0.1 3,434,122 - MPMX20_03263 0.80 -0.5 3,434,133 - MPMX20_03263 0.82 +1.5 3,434,148 + MPMX20_03263 0.84 -3.4 3,434,156 - MPMX20_03263 0.84 -1.2 3,434,210 - -0.7 3,434,253 - +0.2 3,434,474 + MPMX20_03264 0.17 -2.8 3,434,489 - MPMX20_03264 0.19 -1.9 3,434,530 - MPMX20_03264 0.22 -3.3 3,434,612 + MPMX20_03264 0.30 -3.4 3,434,810 + MPMX20_03264 0.48 -1.4 3,435,050 - MPMX20_03264 0.70 -0.1 3,435,063 - MPMX20_03264 0.72 -2.5 3,435,093 - MPMX20_03264 0.74 -2.3 3,435,125 + MPMX20_03264 0.77 -2.8 3,435,133 - MPMX20_03264 0.78 -0.8 3,435,133 - MPMX20_03264 0.78 -2.9 3,435,224 + MPMX20_03264 0.86 -3.5 3,435,233 + MPMX20_03264 0.87 -2.8 3,435,266 + -0.4 3,435,300 + -2.3 3,435,305 + -1.2 3,435,305 + -3.2 3,435,305 + -1.2 3,435,305 + -0.7 3,435,305 + -1.2 3,435,308 - +1.9 3,435,308 - -1.8 3,435,308 - -1.8 3,435,313 - -3.5 3,435,313 - -3.1 3,435,313 - -1.1 3,435,313 - -1.4 3,435,350 + -1.5 3,435,358 - -3.7 3,435,368 - -2.7 3,435,376 + -0.7 3,435,395 + -3.3 3,435,413 - -0.8 3,435,437 - -0.7 3,435,479 - +0.3 3,435,541 + MPMX20_03265 0.12 -0.7 3,435,579 - MPMX20_03265 0.16 +1.1 3,435,589 - MPMX20_03265 0.17 -1.3 3,435,627 + MPMX20_03265 0.21 -0.7 3,435,799 - MPMX20_03265 0.39 -1.4 3,435,799 - MPMX20_03265 0.39 +0.8 3,435,809 - MPMX20_03265 0.40 -1.2 3,435,833 + MPMX20_03265 0.43 -2.2 3,435,833 + MPMX20_03265 0.43 -1.1 3,435,833 + MPMX20_03265 0.43 -0.1 3,435,906 + MPMX20_03265 0.51 -2.6 3,436,048 + MPMX20_03265 0.66 -2.7 3,436,049 + MPMX20_03265 0.66 +1.9 3,436,076 - MPMX20_03265 0.69 -2.2 3,436,109 + MPMX20_03265 0.73 +2.2 3,436,158 + MPMX20_03265 0.78 -0.1 3,436,158 + MPMX20_03265 0.78 -1.2 3,436,171 + MPMX20_03265 0.79 -0.6 3,436,245 - MPMX20_03265 0.87 -0.5 3,436,313 + -0.4
Or see this region's nucleotide sequence