Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02622

Experiment: Thymine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02621 and MPMX20_02622 are separated by 11 nucleotidesMPMX20_02622 and MPMX20_02623 are separated by 9 nucleotidesMPMX20_02623 and MPMX20_02624 are separated by 2 nucleotides MPMX20_02621: MPMX20_02621 - Nitric oxide reductase FlRd-NAD(+) reductase, at 2,762,680 to 2,766,666 _02621 MPMX20_02622: MPMX20_02622 - Bicarbonate transport ATP-binding protein CmpC, at 2,766,678 to 2,767,466 _02622 MPMX20_02623: MPMX20_02623 - Bicarbonate transport system permease protein CmpB, at 2,767,476 to 2,768,357 _02623 MPMX20_02624: MPMX20_02624 - Nitrate/nitrite binding protein NrtA, at 2,768,360 to 2,769,607 _02624 Position (kb) 2766 2767 2768Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2765.680 kb on - strand, within MPMX20_02621at 2765.708 kb on - strand, within MPMX20_02621at 2765.711 kb on + strand, within MPMX20_02621at 2765.716 kb on + strand, within MPMX20_02621at 2765.719 kb on - strand, within MPMX20_02621at 2765.721 kb on + strand, within MPMX20_02621at 2765.721 kb on + strand, within MPMX20_02621at 2765.721 kb on + strand, within MPMX20_02621at 2765.729 kb on - strand, within MPMX20_02621at 2765.729 kb on - strand, within MPMX20_02621at 2765.729 kb on - strand, within MPMX20_02621at 2765.874 kb on - strand, within MPMX20_02621at 2765.899 kb on + strand, within MPMX20_02621at 2765.914 kb on + strand, within MPMX20_02621at 2765.919 kb on + strand, within MPMX20_02621at 2765.919 kb on + strand, within MPMX20_02621at 2766.029 kb on + strand, within MPMX20_02621at 2766.062 kb on + strand, within MPMX20_02621at 2766.112 kb on - strand, within MPMX20_02621at 2766.150 kb on + strand, within MPMX20_02621at 2766.193 kb on + strand, within MPMX20_02621at 2766.220 kb on + strand, within MPMX20_02621at 2766.225 kb on + strand, within MPMX20_02621at 2766.443 kb on + strandat 2766.452 kb on + strandat 2766.460 kb on - strandat 2766.517 kb on + strandat 2766.530 kb on - strandat 2766.596 kb on + strandat 2766.683 kb on - strandat 2766.683 kb on - strandat 2766.752 kb on - strandat 2766.752 kb on - strandat 2766.776 kb on + strand, within MPMX20_02622at 2766.793 kb on - strand, within MPMX20_02622at 2766.862 kb on + strand, within MPMX20_02622at 2766.908 kb on - strand, within MPMX20_02622at 2766.925 kb on + strand, within MPMX20_02622at 2766.933 kb on - strand, within MPMX20_02622at 2766.960 kb on - strand, within MPMX20_02622at 2767.073 kb on + strand, within MPMX20_02622at 2767.081 kb on - strand, within MPMX20_02622at 2767.082 kb on - strand, within MPMX20_02622at 2767.114 kb on - strand, within MPMX20_02622at 2767.167 kb on - strand, within MPMX20_02622at 2767.231 kb on - strand, within MPMX20_02622at 2767.237 kb on + strand, within MPMX20_02622at 2767.241 kb on - strand, within MPMX20_02622at 2767.287 kb on - strand, within MPMX20_02622at 2767.515 kb on - strandat 2767.517 kb on + strandat 2767.519 kb on - strandat 2767.544 kb on + strandat 2767.772 kb on + strand, within MPMX20_02623at 2767.772 kb on + strand, within MPMX20_02623at 2767.779 kb on - strand, within MPMX20_02623at 2767.779 kb on - strand, within MPMX20_02623at 2767.780 kb on - strand, within MPMX20_02623at 2767.790 kb on + strand, within MPMX20_02623at 2767.798 kb on - strand, within MPMX20_02623at 2767.802 kb on + strand, within MPMX20_02623at 2767.805 kb on - strand, within MPMX20_02623at 2767.805 kb on - strand, within MPMX20_02623at 2767.811 kb on - strand, within MPMX20_02623at 2767.831 kb on - strand, within MPMX20_02623at 2767.831 kb on - strand, within MPMX20_02623at 2767.923 kb on - strand, within MPMX20_02623at 2767.924 kb on + strand, within MPMX20_02623at 2767.976 kb on - strand, within MPMX20_02623at 2768.018 kb on + strand, within MPMX20_02623at 2768.110 kb on - strand, within MPMX20_02623at 2768.112 kb on + strand, within MPMX20_02623at 2768.203 kb on + strand, within MPMX20_02623at 2768.267 kb on - strand, within MPMX20_02623at 2768.351 kb on - strandat 2768.367 kb on + strandat 2768.367 kb on + strandat 2768.417 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine (N)
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2,765,680 - MPMX20_02621 0.75 -1.2
2,765,708 - MPMX20_02621 0.76 -0.1
2,765,711 + MPMX20_02621 0.76 -2.7
2,765,716 + MPMX20_02621 0.76 +1.6
2,765,719 - MPMX20_02621 0.76 +1.2
2,765,721 + MPMX20_02621 0.76 -0.3
2,765,721 + MPMX20_02621 0.76 -0.4
2,765,721 + MPMX20_02621 0.76 +0.7
2,765,729 - MPMX20_02621 0.76 -2.2
2,765,729 - MPMX20_02621 0.76 -2.4
2,765,729 - MPMX20_02621 0.76 -1.7
2,765,874 - MPMX20_02621 0.80 -2.8
2,765,899 + MPMX20_02621 0.81 -0.5
2,765,914 + MPMX20_02621 0.81 +0.6
2,765,919 + MPMX20_02621 0.81 -0.1
2,765,919 + MPMX20_02621 0.81 -2.4
2,766,029 + MPMX20_02621 0.84 -0.9
2,766,062 + MPMX20_02621 0.85 -0.1
2,766,112 - MPMX20_02621 0.86 +0.7
2,766,150 + MPMX20_02621 0.87 -1.9
2,766,193 + MPMX20_02621 0.88 -1.5
2,766,220 + MPMX20_02621 0.89 +0.4
2,766,225 + MPMX20_02621 0.89 -1.3
2,766,443 + -2.0
2,766,452 + +0.2
2,766,460 - -1.3
2,766,517 + -1.2
2,766,530 - -0.1
2,766,596 + +0.7
2,766,683 - -0.5
2,766,683 - -0.8
2,766,752 - +1.3
2,766,752 - +2.3
2,766,776 + MPMX20_02622 0.12 +0.3
2,766,793 - MPMX20_02622 0.15 -0.9
2,766,862 + MPMX20_02622 0.23 +2.1
2,766,908 - MPMX20_02622 0.29 +0.6
2,766,925 + MPMX20_02622 0.31 -2.1
2,766,933 - MPMX20_02622 0.32 +1.6
2,766,960 - MPMX20_02622 0.36 +0.2
2,767,073 + MPMX20_02622 0.50 +2.0
2,767,081 - MPMX20_02622 0.51 +1.3
2,767,082 - MPMX20_02622 0.51 +1.3
2,767,114 - MPMX20_02622 0.55 +0.9
2,767,167 - MPMX20_02622 0.62 +0.6
2,767,231 - MPMX20_02622 0.70 +2.2
2,767,237 + MPMX20_02622 0.71 -0.3
2,767,241 - MPMX20_02622 0.71 +0.5
2,767,287 - MPMX20_02622 0.77 -1.6
2,767,515 - +2.9
2,767,517 + +1.9
2,767,519 - +1.5
2,767,544 + +0.8
2,767,772 + MPMX20_02623 0.34 +1.7
2,767,772 + MPMX20_02623 0.34 -1.1
2,767,779 - MPMX20_02623 0.34 +0.5
2,767,779 - MPMX20_02623 0.34 +1.1
2,767,780 - MPMX20_02623 0.34 +0.2
2,767,790 + MPMX20_02623 0.36 +1.4
2,767,798 - MPMX20_02623 0.37 -0.0
2,767,802 + MPMX20_02623 0.37 +0.2
2,767,805 - MPMX20_02623 0.37 -0.3
2,767,805 - MPMX20_02623 0.37 +0.2
2,767,811 - MPMX20_02623 0.38 +1.1
2,767,831 - MPMX20_02623 0.40 +0.1
2,767,831 - MPMX20_02623 0.40 -0.6
2,767,923 - MPMX20_02623 0.51 -0.6
2,767,924 + MPMX20_02623 0.51 +0.8
2,767,976 - MPMX20_02623 0.57 +1.3
2,768,018 + MPMX20_02623 0.61 +1.8
2,768,110 - MPMX20_02623 0.72 -0.1
2,768,112 + MPMX20_02623 0.72 +1.0
2,768,203 + MPMX20_02623 0.82 +1.7
2,768,267 - MPMX20_02623 0.90 +0.0
2,768,351 - +0.8
2,768,367 + +1.6
2,768,367 + -0.9
2,768,417 + +1.0

Or see this region's nucleotide sequence