Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04535

Experiment: Cytidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04534 and MPMX20_04535 are separated by 119 nucleotidesMPMX20_04535 and MPMX20_04536 are separated by 198 nucleotides MPMX20_04534: MPMX20_04534 - Primosomal protein N', at 4,746,504 to 4,748,699 _04534 MPMX20_04535: MPMX20_04535 - HTH-type transcriptional repressor CytR, at 4,748,819 to 4,749,844 _04535 MPMX20_04536: MPMX20_04536 - Cell division protein FtsN, at 4,750,043 to 4,750,948 _04536 Position (kb) 4748 4749 4750Strain fitness (log2 ratio) -2 -1 0 1 2at 4748.695 kb on + strandat 4748.703 kb on - strandat 4748.703 kb on - strandat 4748.891 kb on + strandat 4748.899 kb on - strandat 4748.899 kb on - strandat 4748.943 kb on + strand, within MPMX20_04535at 4748.945 kb on - strand, within MPMX20_04535at 4748.946 kb on + strand, within MPMX20_04535at 4749.002 kb on - strand, within MPMX20_04535at 4749.026 kb on + strand, within MPMX20_04535at 4749.048 kb on + strand, within MPMX20_04535at 4749.064 kb on - strand, within MPMX20_04535at 4749.091 kb on - strand, within MPMX20_04535at 4749.109 kb on - strand, within MPMX20_04535at 4749.145 kb on - strand, within MPMX20_04535at 4749.180 kb on - strand, within MPMX20_04535at 4749.210 kb on + strand, within MPMX20_04535at 4749.242 kb on - strand, within MPMX20_04535at 4749.252 kb on + strand, within MPMX20_04535at 4749.323 kb on - strand, within MPMX20_04535at 4749.351 kb on + strand, within MPMX20_04535at 4749.502 kb on - strand, within MPMX20_04535at 4749.532 kb on - strand, within MPMX20_04535at 4749.569 kb on + strand, within MPMX20_04535at 4749.623 kb on - strand, within MPMX20_04535at 4749.694 kb on + strand, within MPMX20_04535at 4749.822 kb on + strandat 4749.822 kb on + strandat 4749.830 kb on - strandat 4749.830 kb on - strandat 4749.864 kb on + strandat 4749.871 kb on - strandat 4749.872 kb on - strandat 4749.872 kb on - strandat 4749.872 kb on - strandat 4749.872 kb on - strandat 4749.872 kb on - strandat 4749.872 kb on - strandat 4749.873 kb on + strandat 4749.873 kb on + strandat 4749.881 kb on - strandat 4749.915 kb on + strandat 4749.917 kb on + strandat 4750.299 kb on - strand, within MPMX20_04536at 4750.371 kb on + strand, within MPMX20_04536at 4750.371 kb on + strand, within MPMX20_04536at 4750.379 kb on - strand, within MPMX20_04536at 4750.379 kb on - strand, within MPMX20_04536at 4750.394 kb on + strand, within MPMX20_04536at 4750.451 kb on + strand, within MPMX20_04536at 4750.463 kb on + strand, within MPMX20_04536at 4750.476 kb on - strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.546 kb on + strand, within MPMX20_04536at 4750.554 kb on - strand, within MPMX20_04536at 4750.554 kb on - strand, within MPMX20_04536at 4750.554 kb on - strand, within MPMX20_04536at 4750.554 kb on - strand, within MPMX20_04536at 4750.554 kb on - strand, within MPMX20_04536at 4750.554 kb on - strand, within MPMX20_04536at 4750.630 kb on + strand, within MPMX20_04536at 4750.638 kb on - strand, within MPMX20_04536at 4750.734 kb on - strand, within MPMX20_04536at 4750.750 kb on + strand, within MPMX20_04536at 4750.758 kb on - strand, within MPMX20_04536at 4750.803 kb on + strand, within MPMX20_04536at 4750.810 kb on - strand, within MPMX20_04536

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytidine (N)
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4,748,695 + -0.1
4,748,703 - +0.1
4,748,703 - -1.2
4,748,891 + +0.0
4,748,899 - -0.9
4,748,899 - +1.2
4,748,943 + MPMX20_04535 0.12 +0.7
4,748,945 - MPMX20_04535 0.12 +0.6
4,748,946 + MPMX20_04535 0.12 -0.4
4,749,002 - MPMX20_04535 0.18 -0.6
4,749,026 + MPMX20_04535 0.20 +0.8
4,749,048 + MPMX20_04535 0.22 +0.7
4,749,064 - MPMX20_04535 0.24 +0.2
4,749,091 - MPMX20_04535 0.27 +0.4
4,749,109 - MPMX20_04535 0.28 +1.4
4,749,145 - MPMX20_04535 0.32 +0.7
4,749,180 - MPMX20_04535 0.35 +1.2
4,749,210 + MPMX20_04535 0.38 -0.6
4,749,242 - MPMX20_04535 0.41 +0.5
4,749,252 + MPMX20_04535 0.42 +0.8
4,749,323 - MPMX20_04535 0.49 -0.0
4,749,351 + MPMX20_04535 0.52 +1.3
4,749,502 - MPMX20_04535 0.67 +0.5
4,749,532 - MPMX20_04535 0.69 -0.3
4,749,569 + MPMX20_04535 0.73 -0.2
4,749,623 - MPMX20_04535 0.78 -0.2
4,749,694 + MPMX20_04535 0.85 +0.9
4,749,822 + -0.4
4,749,822 + +0.0
4,749,830 - -2.0
4,749,830 - +0.0
4,749,864 + -0.9
4,749,871 - -0.3
4,749,872 - -0.8
4,749,872 - -0.6
4,749,872 - -1.7
4,749,872 - -0.6
4,749,872 - -0.9
4,749,872 - +0.8
4,749,873 + +1.4
4,749,873 + +1.8
4,749,881 - +0.8
4,749,915 + +0.1
4,749,917 + +0.7
4,750,299 - MPMX20_04536 0.28 +0.1
4,750,371 + MPMX20_04536 0.36 -1.5
4,750,371 + MPMX20_04536 0.36 -0.5
4,750,379 - MPMX20_04536 0.37 -0.5
4,750,379 - MPMX20_04536 0.37 +2.0
4,750,394 + MPMX20_04536 0.39 -0.6
4,750,451 + MPMX20_04536 0.45 +0.4
4,750,463 + MPMX20_04536 0.46 +1.2
4,750,476 - MPMX20_04536 0.48 +2.2
4,750,546 + MPMX20_04536 0.56 +1.6
4,750,546 + MPMX20_04536 0.56 +0.1
4,750,546 + MPMX20_04536 0.56 -0.2
4,750,546 + MPMX20_04536 0.56 +0.5
4,750,546 + MPMX20_04536 0.56 +0.3
4,750,546 + MPMX20_04536 0.56 -0.6
4,750,546 + MPMX20_04536 0.56 +1.8
4,750,546 + MPMX20_04536 0.56 -0.0
4,750,546 + MPMX20_04536 0.56 -0.0
4,750,546 + MPMX20_04536 0.56 -1.1
4,750,554 - MPMX20_04536 0.56 +1.5
4,750,554 - MPMX20_04536 0.56 +1.4
4,750,554 - MPMX20_04536 0.56 +0.9
4,750,554 - MPMX20_04536 0.56 +1.6
4,750,554 - MPMX20_04536 0.56 +2.0
4,750,554 - MPMX20_04536 0.56 +0.4
4,750,630 + MPMX20_04536 0.65 +1.1
4,750,638 - MPMX20_04536 0.66 +2.2
4,750,734 - MPMX20_04536 0.76 -1.3
4,750,750 + MPMX20_04536 0.78 -0.6
4,750,758 - MPMX20_04536 0.79 +0.7
4,750,803 + MPMX20_04536 0.84 +0.8
4,750,810 - MPMX20_04536 0.85 +0.4

Or see this region's nucleotide sequence