Experiment: Cytidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04534 and MPMX20_04535 are separated by 119 nucleotides MPMX20_04535 and MPMX20_04536 are separated by 198 nucleotides
MPMX20_04534: MPMX20_04534 - Primosomal protein N', at 4,746,504 to 4,748,699
_04534
MPMX20_04535: MPMX20_04535 - HTH-type transcriptional repressor CytR, at 4,748,819 to 4,749,844
_04535
MPMX20_04536: MPMX20_04536 - Cell division protein FtsN, at 4,750,043 to 4,750,948
_04536
Position (kb)
4748
4749
4750 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4748.695 kb on + strand at 4748.703 kb on - strand at 4748.703 kb on - strand at 4748.891 kb on + strand at 4748.899 kb on - strand at 4748.899 kb on - strand at 4748.943 kb on + strand, within MPMX20_04535 at 4748.945 kb on - strand, within MPMX20_04535 at 4748.946 kb on + strand, within MPMX20_04535 at 4749.002 kb on - strand, within MPMX20_04535 at 4749.026 kb on + strand, within MPMX20_04535 at 4749.048 kb on + strand, within MPMX20_04535 at 4749.064 kb on - strand, within MPMX20_04535 at 4749.091 kb on - strand, within MPMX20_04535 at 4749.109 kb on - strand, within MPMX20_04535 at 4749.145 kb on - strand, within MPMX20_04535 at 4749.180 kb on - strand, within MPMX20_04535 at 4749.210 kb on + strand, within MPMX20_04535 at 4749.242 kb on - strand, within MPMX20_04535 at 4749.252 kb on + strand, within MPMX20_04535 at 4749.323 kb on - strand, within MPMX20_04535 at 4749.351 kb on + strand, within MPMX20_04535 at 4749.502 kb on - strand, within MPMX20_04535 at 4749.532 kb on - strand, within MPMX20_04535 at 4749.569 kb on + strand, within MPMX20_04535 at 4749.623 kb on - strand, within MPMX20_04535 at 4749.694 kb on + strand, within MPMX20_04535 at 4749.822 kb on + strand at 4749.822 kb on + strand at 4749.830 kb on - strand at 4749.830 kb on - strand at 4749.864 kb on + strand at 4749.871 kb on - strand at 4749.872 kb on - strand at 4749.872 kb on - strand at 4749.872 kb on - strand at 4749.872 kb on - strand at 4749.872 kb on - strand at 4749.872 kb on - strand at 4749.873 kb on + strand at 4749.873 kb on + strand at 4749.881 kb on - strand at 4749.915 kb on + strand at 4749.917 kb on + strand at 4750.299 kb on - strand, within MPMX20_04536 at 4750.371 kb on + strand, within MPMX20_04536 at 4750.371 kb on + strand, within MPMX20_04536 at 4750.379 kb on - strand, within MPMX20_04536 at 4750.379 kb on - strand, within MPMX20_04536 at 4750.394 kb on + strand, within MPMX20_04536 at 4750.451 kb on + strand, within MPMX20_04536 at 4750.463 kb on + strand, within MPMX20_04536 at 4750.476 kb on - strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.546 kb on + strand, within MPMX20_04536 at 4750.554 kb on - strand, within MPMX20_04536 at 4750.554 kb on - strand, within MPMX20_04536 at 4750.554 kb on - strand, within MPMX20_04536 at 4750.554 kb on - strand, within MPMX20_04536 at 4750.554 kb on - strand, within MPMX20_04536 at 4750.554 kb on - strand, within MPMX20_04536 at 4750.630 kb on + strand, within MPMX20_04536 at 4750.638 kb on - strand, within MPMX20_04536 at 4750.734 kb on - strand, within MPMX20_04536 at 4750.750 kb on + strand, within MPMX20_04536 at 4750.758 kb on - strand, within MPMX20_04536 at 4750.803 kb on + strand, within MPMX20_04536 at 4750.810 kb on - strand, within MPMX20_04536
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine (N) remove 4,748,695 + -0.1 4,748,703 - +0.1 4,748,703 - -1.2 4,748,891 + +0.0 4,748,899 - -0.9 4,748,899 - +1.2 4,748,943 + MPMX20_04535 0.12 +0.7 4,748,945 - MPMX20_04535 0.12 +0.6 4,748,946 + MPMX20_04535 0.12 -0.4 4,749,002 - MPMX20_04535 0.18 -0.6 4,749,026 + MPMX20_04535 0.20 +0.8 4,749,048 + MPMX20_04535 0.22 +0.7 4,749,064 - MPMX20_04535 0.24 +0.2 4,749,091 - MPMX20_04535 0.27 +0.4 4,749,109 - MPMX20_04535 0.28 +1.4 4,749,145 - MPMX20_04535 0.32 +0.7 4,749,180 - MPMX20_04535 0.35 +1.2 4,749,210 + MPMX20_04535 0.38 -0.6 4,749,242 - MPMX20_04535 0.41 +0.5 4,749,252 + MPMX20_04535 0.42 +0.8 4,749,323 - MPMX20_04535 0.49 -0.0 4,749,351 + MPMX20_04535 0.52 +1.3 4,749,502 - MPMX20_04535 0.67 +0.5 4,749,532 - MPMX20_04535 0.69 -0.3 4,749,569 + MPMX20_04535 0.73 -0.2 4,749,623 - MPMX20_04535 0.78 -0.2 4,749,694 + MPMX20_04535 0.85 +0.9 4,749,822 + -0.4 4,749,822 + +0.0 4,749,830 - -2.0 4,749,830 - +0.0 4,749,864 + -0.9 4,749,871 - -0.3 4,749,872 - -0.8 4,749,872 - -0.6 4,749,872 - -1.7 4,749,872 - -0.6 4,749,872 - -0.9 4,749,872 - +0.8 4,749,873 + +1.4 4,749,873 + +1.8 4,749,881 - +0.8 4,749,915 + +0.1 4,749,917 + +0.7 4,750,299 - MPMX20_04536 0.28 +0.1 4,750,371 + MPMX20_04536 0.36 -1.5 4,750,371 + MPMX20_04536 0.36 -0.5 4,750,379 - MPMX20_04536 0.37 -0.5 4,750,379 - MPMX20_04536 0.37 +2.0 4,750,394 + MPMX20_04536 0.39 -0.6 4,750,451 + MPMX20_04536 0.45 +0.4 4,750,463 + MPMX20_04536 0.46 +1.2 4,750,476 - MPMX20_04536 0.48 +2.2 4,750,546 + MPMX20_04536 0.56 +1.6 4,750,546 + MPMX20_04536 0.56 +0.1 4,750,546 + MPMX20_04536 0.56 -0.2 4,750,546 + MPMX20_04536 0.56 +0.5 4,750,546 + MPMX20_04536 0.56 +0.3 4,750,546 + MPMX20_04536 0.56 -0.6 4,750,546 + MPMX20_04536 0.56 +1.8 4,750,546 + MPMX20_04536 0.56 -0.0 4,750,546 + MPMX20_04536 0.56 -0.0 4,750,546 + MPMX20_04536 0.56 -1.1 4,750,554 - MPMX20_04536 0.56 +1.5 4,750,554 - MPMX20_04536 0.56 +1.4 4,750,554 - MPMX20_04536 0.56 +0.9 4,750,554 - MPMX20_04536 0.56 +1.6 4,750,554 - MPMX20_04536 0.56 +2.0 4,750,554 - MPMX20_04536 0.56 +0.4 4,750,630 + MPMX20_04536 0.65 +1.1 4,750,638 - MPMX20_04536 0.66 +2.2 4,750,734 - MPMX20_04536 0.76 -1.3 4,750,750 + MPMX20_04536 0.78 -0.6 4,750,758 - MPMX20_04536 0.79 +0.7 4,750,803 + MPMX20_04536 0.84 +0.8 4,750,810 - MPMX20_04536 0.85 +0.4
Or see this region's nucleotide sequence