Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03773

Experiment: Cytidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03772 and MPMX20_03773 are separated by 127 nucleotidesMPMX20_03773 and MPMX20_03774 are separated by 47 nucleotidesMPMX20_03774 and MPMX20_03775 are separated by 91 nucleotides MPMX20_03772: MPMX20_03772 - Ribose-5-phosphate isomerase A, at 3,975,405 to 3,976,064 _03772 MPMX20_03773: MPMX20_03773 - HTH-type transcriptional regulator ArgP, at 3,976,192 to 3,977,085 _03773 MPMX20_03774: MPMX20_03774 - 26 kDa periplasmic immunogenic protein, at 3,977,133 to 3,977,873 _03774 MPMX20_03775: MPMX20_03775 - Arginine exporter protein ArgO, at 3,977,965 to 3,978,600 _03775 Position (kb) 3976 3977 3978Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3975.383 kb on + strandat 3975.388 kb on + strandat 3975.393 kb on + strandat 3975.401 kb on - strandat 3975.425 kb on - strandat 3976.206 kb on + strandat 3976.214 kb on - strandat 3976.214 kb on - strandat 3976.245 kb on + strandat 3976.280 kb on - strandat 3976.300 kb on - strand, within MPMX20_03773at 3976.300 kb on - strand, within MPMX20_03773at 3976.360 kb on - strand, within MPMX20_03773at 3976.387 kb on - strand, within MPMX20_03773at 3976.414 kb on - strand, within MPMX20_03773at 3976.414 kb on - strand, within MPMX20_03773at 3976.414 kb on - strand, within MPMX20_03773at 3976.432 kb on - strand, within MPMX20_03773at 3976.459 kb on - strand, within MPMX20_03773at 3976.459 kb on - strand, within MPMX20_03773at 3976.541 kb on + strand, within MPMX20_03773at 3976.666 kb on - strand, within MPMX20_03773at 3976.749 kb on + strand, within MPMX20_03773at 3977.060 kb on + strandat 3977.060 kb on + strandat 3977.068 kb on - strandat 3977.068 kb on - strandat 3977.079 kb on + strandat 3977.108 kb on - strandat 3977.196 kb on + strandat 3977.240 kb on + strand, within MPMX20_03774at 3977.280 kb on + strand, within MPMX20_03774at 3977.320 kb on + strand, within MPMX20_03774at 3977.343 kb on - strand, within MPMX20_03774at 3977.525 kb on + strand, within MPMX20_03774at 3977.533 kb on - strand, within MPMX20_03774at 3977.533 kb on - strand, within MPMX20_03774at 3977.611 kb on - strand, within MPMX20_03774at 3977.611 kb on - strand, within MPMX20_03774at 3977.632 kb on + strand, within MPMX20_03774at 3977.836 kb on - strandat 3977.928 kb on - strandat 3977.935 kb on - strandat 3977.949 kb on + strandat 3978.009 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytidine (N)
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3,975,383 + -0.3
3,975,388 + -0.2
3,975,393 + +1.1
3,975,401 - -0.2
3,975,425 - -0.1
3,976,206 + -0.2
3,976,214 - -1.3
3,976,214 - -1.6
3,976,245 + -1.2
3,976,280 - +0.4
3,976,300 - MPMX20_03773 0.12 -3.6
3,976,300 - MPMX20_03773 0.12 -1.9
3,976,360 - MPMX20_03773 0.19 +0.2
3,976,387 - MPMX20_03773 0.22 -1.0
3,976,414 - MPMX20_03773 0.25 -1.7
3,976,414 - MPMX20_03773 0.25 +1.2
3,976,414 - MPMX20_03773 0.25 +0.1
3,976,432 - MPMX20_03773 0.27 +1.0
3,976,459 - MPMX20_03773 0.30 -0.8
3,976,459 - MPMX20_03773 0.30 -0.5
3,976,541 + MPMX20_03773 0.39 -1.8
3,976,666 - MPMX20_03773 0.53 -1.0
3,976,749 + MPMX20_03773 0.62 +1.9
3,977,060 + +0.1
3,977,060 + -0.7
3,977,068 - -0.5
3,977,068 - +0.1
3,977,079 + -0.0
3,977,108 - +0.6
3,977,196 + +1.2
3,977,240 + MPMX20_03774 0.14 +0.0
3,977,280 + MPMX20_03774 0.20 +1.1
3,977,320 + MPMX20_03774 0.25 -0.1
3,977,343 - MPMX20_03774 0.28 -0.0
3,977,525 + MPMX20_03774 0.53 -0.9
3,977,533 - MPMX20_03774 0.54 +2.3
3,977,533 - MPMX20_03774 0.54 -0.2
3,977,611 - MPMX20_03774 0.65 -0.2
3,977,611 - MPMX20_03774 0.65 +1.3
3,977,632 + MPMX20_03774 0.67 -0.5
3,977,836 - +0.5
3,977,928 - +0.5
3,977,935 - +0.8
3,977,949 + +2.1
3,978,009 + -0.2

Or see this region's nucleotide sequence