Experiment: Cytidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02796 and MPMX20_02797 are separated by 189 nucleotides MPMX20_02797 and MPMX20_02798 are separated by 19 nucleotides
MPMX20_02796: MPMX20_02796 - C4-dicarboxylate transport protein, at 2,953,304 to 2,954,563
_02796
MPMX20_02797: MPMX20_02797 - Chemotaxis protein CheW, at 2,954,753 to 2,955,256
_02797
MPMX20_02798: MPMX20_02798 - Chemotaxis protein CheA, at 2,955,276 to 2,957,309
_02798
Position (kb)
2954
2955
2956 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2953.845 kb on + strand, within MPMX20_02796 at 2954.037 kb on + strand, within MPMX20_02796 at 2954.074 kb on - strand, within MPMX20_02796 at 2954.093 kb on + strand, within MPMX20_02796 at 2954.150 kb on - strand, within MPMX20_02796 at 2954.197 kb on + strand, within MPMX20_02796 at 2954.204 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.219 kb on - strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.229 kb on + strand, within MPMX20_02796 at 2954.234 kb on - strand, within MPMX20_02796 at 2954.234 kb on - strand, within MPMX20_02796 at 2954.234 kb on - strand, within MPMX20_02796 at 2954.242 kb on - strand, within MPMX20_02796 at 2954.244 kb on - strand, within MPMX20_02796 at 2954.282 kb on + strand, within MPMX20_02796 at 2954.287 kb on - strand, within MPMX20_02796 at 2954.298 kb on + strand, within MPMX20_02796 at 2954.306 kb on - strand, within MPMX20_02796 at 2954.348 kb on - strand, within MPMX20_02796 at 2954.589 kb on + strand at 2954.589 kb on + strand at 2954.589 kb on + strand at 2954.589 kb on + strand at 2954.597 kb on - strand at 2954.597 kb on - strand at 2954.597 kb on - strand at 2954.597 kb on - strand at 2954.633 kb on + strand at 2954.653 kb on - strand at 2954.735 kb on - strand at 2954.758 kb on - strand at 2954.796 kb on + strand at 2954.799 kb on - strand at 2954.809 kb on - strand, within MPMX20_02797 at 2954.809 kb on - strand, within MPMX20_02797 at 2954.921 kb on + strand, within MPMX20_02797 at 2954.930 kb on + strand, within MPMX20_02797 at 2954.964 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.051 kb on + strand, within MPMX20_02797 at 2955.051 kb on + strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.088 kb on - strand, within MPMX20_02797 at 2955.116 kb on + strand, within MPMX20_02797 at 2955.118 kb on + strand, within MPMX20_02797 at 2955.126 kb on - strand, within MPMX20_02797 at 2955.172 kb on + strand, within MPMX20_02797 at 2955.182 kb on + strand, within MPMX20_02797 at 2955.203 kb on + strand, within MPMX20_02797 at 2955.264 kb on + strand at 2955.271 kb on - strand at 2955.283 kb on + strand at 2955.283 kb on + strand at 2955.344 kb on + strand at 2955.357 kb on - strand at 2955.368 kb on - strand at 2955.368 kb on - strand at 2955.368 kb on - strand at 2955.424 kb on + strand at 2955.427 kb on + strand at 2955.427 kb on + strand at 2955.432 kb on - strand at 2955.435 kb on - strand at 2955.581 kb on + strand, within MPMX20_02798 at 2955.581 kb on + strand, within MPMX20_02798 at 2955.589 kb on - strand, within MPMX20_02798 at 2955.623 kb on - strand, within MPMX20_02798 at 2955.731 kb on + strand, within MPMX20_02798 at 2955.920 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2955.963 kb on + strand, within MPMX20_02798 at 2956.029 kb on + strand, within MPMX20_02798 at 2956.092 kb on + strand, within MPMX20_02798 at 2956.099 kb on - strand, within MPMX20_02798 at 2956.157 kb on + strand, within MPMX20_02798
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine (N) remove 2,953,845 + MPMX20_02796 0.43 -0.1 2,954,037 + MPMX20_02796 0.58 -0.3 2,954,074 - MPMX20_02796 0.61 +1.4 2,954,093 + MPMX20_02796 0.63 -0.7 2,954,150 - MPMX20_02796 0.67 +0.3 2,954,197 + MPMX20_02796 0.71 -1.1 2,954,204 + MPMX20_02796 0.71 -0.1 2,954,211 + MPMX20_02796 0.72 +1.1 2,954,211 + MPMX20_02796 0.72 -0.4 2,954,211 + MPMX20_02796 0.72 +0.3 2,954,211 + MPMX20_02796 0.72 -0.3 2,954,219 - MPMX20_02796 0.73 +0.7 2,954,226 + MPMX20_02796 0.73 +0.7 2,954,226 + MPMX20_02796 0.73 -0.1 2,954,226 + MPMX20_02796 0.73 +0.0 2,954,226 + MPMX20_02796 0.73 -0.3 2,954,229 + MPMX20_02796 0.73 +1.4 2,954,234 - MPMX20_02796 0.74 +0.3 2,954,234 - MPMX20_02796 0.74 -2.0 2,954,234 - MPMX20_02796 0.74 -0.4 2,954,242 - MPMX20_02796 0.74 -1.9 2,954,244 - MPMX20_02796 0.75 +0.5 2,954,282 + MPMX20_02796 0.78 +0.8 2,954,287 - MPMX20_02796 0.78 -0.2 2,954,298 + MPMX20_02796 0.79 +1.3 2,954,306 - MPMX20_02796 0.80 -0.9 2,954,348 - MPMX20_02796 0.83 -1.7 2,954,589 + -1.1 2,954,589 + -1.6 2,954,589 + -0.5 2,954,589 + -0.7 2,954,597 - -0.7 2,954,597 - -0.1 2,954,597 - -0.3 2,954,597 - -0.1 2,954,633 + +0.4 2,954,653 - +0.3 2,954,735 - -1.1 2,954,758 - -1.4 2,954,796 + +0.6 2,954,799 - +0.3 2,954,809 - MPMX20_02797 0.11 -1.1 2,954,809 - MPMX20_02797 0.11 +0.7 2,954,921 + MPMX20_02797 0.33 +1.3 2,954,930 + MPMX20_02797 0.35 +0.1 2,954,964 + MPMX20_02797 0.42 +0.4 2,955,046 + MPMX20_02797 0.58 -0.7 2,955,046 + MPMX20_02797 0.58 +1.2 2,955,046 + MPMX20_02797 0.58 +1.7 2,955,046 + MPMX20_02797 0.58 +0.4 2,955,051 + MPMX20_02797 0.59 +0.3 2,955,051 + MPMX20_02797 0.59 +1.6 2,955,054 - MPMX20_02797 0.60 +0.9 2,955,054 - MPMX20_02797 0.60 -0.3 2,955,054 - MPMX20_02797 0.60 +0.9 2,955,054 - MPMX20_02797 0.60 +0.5 2,955,054 - MPMX20_02797 0.60 +0.0 2,955,061 + MPMX20_02797 0.61 +0.8 2,955,061 + MPMX20_02797 0.61 +1.0 2,955,061 + MPMX20_02797 0.61 +0.8 2,955,061 + MPMX20_02797 0.61 +0.9 2,955,088 - MPMX20_02797 0.66 -0.2 2,955,116 + MPMX20_02797 0.72 -0.1 2,955,118 + MPMX20_02797 0.72 +1.2 2,955,126 - MPMX20_02797 0.74 +0.5 2,955,172 + MPMX20_02797 0.83 -0.7 2,955,182 + MPMX20_02797 0.85 -0.7 2,955,203 + MPMX20_02797 0.89 -1.6 2,955,264 + -0.2 2,955,271 - -0.2 2,955,283 + +0.5 2,955,283 + +0.4 2,955,344 + +1.0 2,955,357 - +0.6 2,955,368 - -1.6 2,955,368 - +0.2 2,955,368 - +0.7 2,955,424 + +1.3 2,955,427 + -0.9 2,955,427 + -0.3 2,955,432 - -2.4 2,955,435 - -1.1 2,955,581 + MPMX20_02798 0.15 +1.2 2,955,581 + MPMX20_02798 0.15 -0.1 2,955,589 - MPMX20_02798 0.15 +0.4 2,955,623 - MPMX20_02798 0.17 +0.8 2,955,731 + MPMX20_02798 0.22 -0.7 2,955,920 + MPMX20_02798 0.32 +0.8 2,955,963 + MPMX20_02798 0.34 -2.8 2,955,963 + MPMX20_02798 0.34 +1.0 2,955,963 + MPMX20_02798 0.34 +0.5 2,955,963 + MPMX20_02798 0.34 -0.3 2,955,963 + MPMX20_02798 0.34 -0.1 2,955,963 + MPMX20_02798 0.34 -0.1 2,955,963 + MPMX20_02798 0.34 -0.0 2,956,029 + MPMX20_02798 0.37 +0.3 2,956,092 + MPMX20_02798 0.40 -0.7 2,956,099 - MPMX20_02798 0.40 -0.1 2,956,157 + MPMX20_02798 0.43 +0.7
Or see this region's nucleotide sequence