Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02797

Experiment: Cytidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02796 and MPMX20_02797 are separated by 189 nucleotidesMPMX20_02797 and MPMX20_02798 are separated by 19 nucleotides MPMX20_02796: MPMX20_02796 - C4-dicarboxylate transport protein, at 2,953,304 to 2,954,563 _02796 MPMX20_02797: MPMX20_02797 - Chemotaxis protein CheW, at 2,954,753 to 2,955,256 _02797 MPMX20_02798: MPMX20_02798 - Chemotaxis protein CheA, at 2,955,276 to 2,957,309 _02798 Position (kb) 2954 2955 2956Strain fitness (log2 ratio) -3 -2 -1 0 1at 2953.845 kb on + strand, within MPMX20_02796at 2954.037 kb on + strand, within MPMX20_02796at 2954.074 kb on - strand, within MPMX20_02796at 2954.093 kb on + strand, within MPMX20_02796at 2954.150 kb on - strand, within MPMX20_02796at 2954.197 kb on + strand, within MPMX20_02796at 2954.204 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.211 kb on + strand, within MPMX20_02796at 2954.219 kb on - strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.226 kb on + strand, within MPMX20_02796at 2954.229 kb on + strand, within MPMX20_02796at 2954.234 kb on - strand, within MPMX20_02796at 2954.234 kb on - strand, within MPMX20_02796at 2954.234 kb on - strand, within MPMX20_02796at 2954.242 kb on - strand, within MPMX20_02796at 2954.244 kb on - strand, within MPMX20_02796at 2954.282 kb on + strand, within MPMX20_02796at 2954.287 kb on - strand, within MPMX20_02796at 2954.298 kb on + strand, within MPMX20_02796at 2954.306 kb on - strand, within MPMX20_02796at 2954.348 kb on - strand, within MPMX20_02796at 2954.589 kb on + strandat 2954.589 kb on + strandat 2954.589 kb on + strandat 2954.589 kb on + strandat 2954.597 kb on - strandat 2954.597 kb on - strandat 2954.597 kb on - strandat 2954.597 kb on - strandat 2954.633 kb on + strandat 2954.653 kb on - strandat 2954.735 kb on - strandat 2954.758 kb on - strandat 2954.796 kb on + strandat 2954.799 kb on - strandat 2954.809 kb on - strand, within MPMX20_02797at 2954.809 kb on - strand, within MPMX20_02797at 2954.921 kb on + strand, within MPMX20_02797at 2954.930 kb on + strand, within MPMX20_02797at 2954.964 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.046 kb on + strand, within MPMX20_02797at 2955.051 kb on + strand, within MPMX20_02797at 2955.051 kb on + strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.054 kb on - strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.061 kb on + strand, within MPMX20_02797at 2955.088 kb on - strand, within MPMX20_02797at 2955.116 kb on + strand, within MPMX20_02797at 2955.118 kb on + strand, within MPMX20_02797at 2955.126 kb on - strand, within MPMX20_02797at 2955.172 kb on + strand, within MPMX20_02797at 2955.182 kb on + strand, within MPMX20_02797at 2955.203 kb on + strand, within MPMX20_02797at 2955.264 kb on + strandat 2955.271 kb on - strandat 2955.283 kb on + strandat 2955.283 kb on + strandat 2955.344 kb on + strandat 2955.357 kb on - strandat 2955.368 kb on - strandat 2955.368 kb on - strandat 2955.368 kb on - strandat 2955.424 kb on + strandat 2955.427 kb on + strandat 2955.427 kb on + strandat 2955.432 kb on - strandat 2955.435 kb on - strandat 2955.581 kb on + strand, within MPMX20_02798at 2955.581 kb on + strand, within MPMX20_02798at 2955.589 kb on - strand, within MPMX20_02798at 2955.623 kb on - strand, within MPMX20_02798at 2955.731 kb on + strand, within MPMX20_02798at 2955.920 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2955.963 kb on + strand, within MPMX20_02798at 2956.029 kb on + strand, within MPMX20_02798at 2956.092 kb on + strand, within MPMX20_02798at 2956.099 kb on - strand, within MPMX20_02798at 2956.157 kb on + strand, within MPMX20_02798

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytidine (N)
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2,953,845 + MPMX20_02796 0.43 -0.1
2,954,037 + MPMX20_02796 0.58 -0.3
2,954,074 - MPMX20_02796 0.61 +1.4
2,954,093 + MPMX20_02796 0.63 -0.7
2,954,150 - MPMX20_02796 0.67 +0.3
2,954,197 + MPMX20_02796 0.71 -1.1
2,954,204 + MPMX20_02796 0.71 -0.1
2,954,211 + MPMX20_02796 0.72 +1.1
2,954,211 + MPMX20_02796 0.72 -0.4
2,954,211 + MPMX20_02796 0.72 +0.3
2,954,211 + MPMX20_02796 0.72 -0.3
2,954,219 - MPMX20_02796 0.73 +0.7
2,954,226 + MPMX20_02796 0.73 +0.7
2,954,226 + MPMX20_02796 0.73 -0.1
2,954,226 + MPMX20_02796 0.73 +0.0
2,954,226 + MPMX20_02796 0.73 -0.3
2,954,229 + MPMX20_02796 0.73 +1.4
2,954,234 - MPMX20_02796 0.74 +0.3
2,954,234 - MPMX20_02796 0.74 -2.0
2,954,234 - MPMX20_02796 0.74 -0.4
2,954,242 - MPMX20_02796 0.74 -1.9
2,954,244 - MPMX20_02796 0.75 +0.5
2,954,282 + MPMX20_02796 0.78 +0.8
2,954,287 - MPMX20_02796 0.78 -0.2
2,954,298 + MPMX20_02796 0.79 +1.3
2,954,306 - MPMX20_02796 0.80 -0.9
2,954,348 - MPMX20_02796 0.83 -1.7
2,954,589 + -1.1
2,954,589 + -1.6
2,954,589 + -0.5
2,954,589 + -0.7
2,954,597 - -0.7
2,954,597 - -0.1
2,954,597 - -0.3
2,954,597 - -0.1
2,954,633 + +0.4
2,954,653 - +0.3
2,954,735 - -1.1
2,954,758 - -1.4
2,954,796 + +0.6
2,954,799 - +0.3
2,954,809 - MPMX20_02797 0.11 -1.1
2,954,809 - MPMX20_02797 0.11 +0.7
2,954,921 + MPMX20_02797 0.33 +1.3
2,954,930 + MPMX20_02797 0.35 +0.1
2,954,964 + MPMX20_02797 0.42 +0.4
2,955,046 + MPMX20_02797 0.58 -0.7
2,955,046 + MPMX20_02797 0.58 +1.2
2,955,046 + MPMX20_02797 0.58 +1.7
2,955,046 + MPMX20_02797 0.58 +0.4
2,955,051 + MPMX20_02797 0.59 +0.3
2,955,051 + MPMX20_02797 0.59 +1.6
2,955,054 - MPMX20_02797 0.60 +0.9
2,955,054 - MPMX20_02797 0.60 -0.3
2,955,054 - MPMX20_02797 0.60 +0.9
2,955,054 - MPMX20_02797 0.60 +0.5
2,955,054 - MPMX20_02797 0.60 +0.0
2,955,061 + MPMX20_02797 0.61 +0.8
2,955,061 + MPMX20_02797 0.61 +1.0
2,955,061 + MPMX20_02797 0.61 +0.8
2,955,061 + MPMX20_02797 0.61 +0.9
2,955,088 - MPMX20_02797 0.66 -0.2
2,955,116 + MPMX20_02797 0.72 -0.1
2,955,118 + MPMX20_02797 0.72 +1.2
2,955,126 - MPMX20_02797 0.74 +0.5
2,955,172 + MPMX20_02797 0.83 -0.7
2,955,182 + MPMX20_02797 0.85 -0.7
2,955,203 + MPMX20_02797 0.89 -1.6
2,955,264 + -0.2
2,955,271 - -0.2
2,955,283 + +0.5
2,955,283 + +0.4
2,955,344 + +1.0
2,955,357 - +0.6
2,955,368 - -1.6
2,955,368 - +0.2
2,955,368 - +0.7
2,955,424 + +1.3
2,955,427 + -0.9
2,955,427 + -0.3
2,955,432 - -2.4
2,955,435 - -1.1
2,955,581 + MPMX20_02798 0.15 +1.2
2,955,581 + MPMX20_02798 0.15 -0.1
2,955,589 - MPMX20_02798 0.15 +0.4
2,955,623 - MPMX20_02798 0.17 +0.8
2,955,731 + MPMX20_02798 0.22 -0.7
2,955,920 + MPMX20_02798 0.32 +0.8
2,955,963 + MPMX20_02798 0.34 -2.8
2,955,963 + MPMX20_02798 0.34 +1.0
2,955,963 + MPMX20_02798 0.34 +0.5
2,955,963 + MPMX20_02798 0.34 -0.3
2,955,963 + MPMX20_02798 0.34 -0.1
2,955,963 + MPMX20_02798 0.34 -0.1
2,955,963 + MPMX20_02798 0.34 -0.0
2,956,029 + MPMX20_02798 0.37 +0.3
2,956,092 + MPMX20_02798 0.40 -0.7
2,956,099 - MPMX20_02798 0.40 -0.1
2,956,157 + MPMX20_02798 0.43 +0.7

Or see this region's nucleotide sequence