Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02597

Experiment: Cytidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02596 and MPMX20_02597 are separated by 157 nucleotidesMPMX20_02597 and MPMX20_02598 are separated by 35 nucleotidesMPMX20_02598 and MPMX20_02599 are separated by 61 nucleotidesMPMX20_02599 and MPMX20_02600 are separated by 107 nucleotides MPMX20_02596: MPMX20_02596 - Formyltetrahydrofolate deformylase, at 2,733,911 to 2,734,753 _02596 MPMX20_02597: MPMX20_02597 - tRNA-Tyr, at 2,734,911 to 2,734,995 _02597 MPMX20_02598: MPMX20_02598 - tRNA-Tyr, at 2,735,031 to 2,735,115 _02598 MPMX20_02599: MPMX20_02599 - HTH-type transcriptional regulator LrpC, at 2,735,177 to 2,735,620 _02599 MPMX20_02600: MPMX20_02600 - hypothetical protein, at 2,735,728 to 2,736,624 _02600 Position (kb) 2734 2735Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2733.927 kb on + strandat 2733.927 kb on + strandat 2733.933 kb on - strandat 2733.943 kb on + strandat 2733.951 kb on - strandat 2733.951 kb on - strandat 2733.996 kb on + strand, within MPMX20_02596at 2734.004 kb on + strand, within MPMX20_02596at 2734.036 kb on + strand, within MPMX20_02596at 2734.039 kb on - strand, within MPMX20_02596at 2734.061 kb on - strand, within MPMX20_02596at 2734.070 kb on + strand, within MPMX20_02596at 2734.089 kb on + strand, within MPMX20_02596at 2734.123 kb on + strand, within MPMX20_02596at 2734.123 kb on + strand, within MPMX20_02596at 2734.131 kb on - strand, within MPMX20_02596at 2734.131 kb on - strand, within MPMX20_02596at 2734.132 kb on - strand, within MPMX20_02596at 2734.157 kb on + strand, within MPMX20_02596at 2734.200 kb on + strand, within MPMX20_02596at 2734.200 kb on + strand, within MPMX20_02596at 2734.219 kb on - strand, within MPMX20_02596at 2734.244 kb on + strand, within MPMX20_02596at 2734.299 kb on - strand, within MPMX20_02596at 2734.299 kb on - strand, within MPMX20_02596at 2734.329 kb on - strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.366 kb on + strand, within MPMX20_02596at 2734.432 kb on - strand, within MPMX20_02596at 2734.432 kb on - strand, within MPMX20_02596at 2734.493 kb on + strand, within MPMX20_02596at 2734.511 kb on - strand, within MPMX20_02596at 2734.525 kb on - strand, within MPMX20_02596at 2734.622 kb on + strand, within MPMX20_02596at 2734.630 kb on - strand, within MPMX20_02596at 2734.630 kb on - strand, within MPMX20_02596at 2734.635 kb on - strand, within MPMX20_02596at 2734.684 kb on - strandat 2734.686 kb on + strandat 2734.686 kb on + strandat 2734.686 kb on + strandat 2734.698 kb on + strandat 2734.778 kb on + strandat 2734.785 kb on + strandat 2734.870 kb on + strandat 2734.899 kb on + strandat 2734.907 kb on - strandat 2734.928 kb on + strand, within MPMX20_02597at 2734.928 kb on + strand, within MPMX20_02597at 2734.928 kb on + strand, within MPMX20_02597at 2734.928 kb on + strand, within MPMX20_02597at 2734.936 kb on - strand, within MPMX20_02597at 2735.056 kb on - strand, within MPMX20_02598at 2735.056 kb on - strand, within MPMX20_02598at 2735.056 kb on - strand, within MPMX20_02598at 2735.056 kb on - strand, within MPMX20_02598at 2735.188 kb on - strandat 2735.192 kb on - strandat 2735.239 kb on - strand, within MPMX20_02599at 2735.270 kb on + strand, within MPMX20_02599at 2735.298 kb on - strand, within MPMX20_02599at 2735.320 kb on - strand, within MPMX20_02599at 2735.389 kb on - strand, within MPMX20_02599at 2735.430 kb on - strand, within MPMX20_02599at 2735.432 kb on - strand, within MPMX20_02599at 2735.437 kb on - strand, within MPMX20_02599at 2735.452 kb on - strand, within MPMX20_02599at 2735.463 kb on - strand, within MPMX20_02599at 2735.463 kb on - strand, within MPMX20_02599at 2735.473 kb on + strand, within MPMX20_02599at 2735.490 kb on + strand, within MPMX20_02599at 2735.508 kb on + strand, within MPMX20_02599at 2735.510 kb on + strand, within MPMX20_02599at 2735.511 kb on - strand, within MPMX20_02599at 2735.511 kb on - strand, within MPMX20_02599at 2735.511 kb on - strand, within MPMX20_02599at 2735.519 kb on + strand, within MPMX20_02599at 2735.553 kb on - strand, within MPMX20_02599at 2735.565 kb on + strand, within MPMX20_02599at 2735.573 kb on - strand, within MPMX20_02599at 2735.579 kb on + strandat 2735.660 kb on - strandat 2735.661 kb on - strandat 2735.813 kb on - strandat 2735.850 kb on + strand, within MPMX20_02600at 2735.853 kb on - strand, within MPMX20_02600at 2735.953 kb on - strand, within MPMX20_02600at 2735.956 kb on + strand, within MPMX20_02600at 2735.958 kb on + strand, within MPMX20_02600at 2735.959 kb on - strand, within MPMX20_02600at 2735.966 kb on + strand, within MPMX20_02600at 2735.967 kb on - strand, within MPMX20_02600at 2735.974 kb on - strand, within MPMX20_02600at 2735.976 kb on + strand, within MPMX20_02600at 2735.984 kb on - strand, within MPMX20_02600at 2735.991 kb on - strand, within MPMX20_02600

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Per-strain Table

Position Strand Gene LocusTag Fraction Cytidine (N)
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2,733,927 + -1.8
2,733,927 + -1.9
2,733,933 - -1.7
2,733,943 + -2.1
2,733,951 - -2.7
2,733,951 - -0.1
2,733,996 + MPMX20_02596 0.10 +0.7
2,734,004 + MPMX20_02596 0.11 -1.2
2,734,036 + MPMX20_02596 0.15 -3.9
2,734,039 - MPMX20_02596 0.15 -1.7
2,734,061 - MPMX20_02596 0.18 +0.4
2,734,070 + MPMX20_02596 0.19 -1.4
2,734,089 + MPMX20_02596 0.21 -1.8
2,734,123 + MPMX20_02596 0.25 -1.7
2,734,123 + MPMX20_02596 0.25 -1.9
2,734,131 - MPMX20_02596 0.26 -0.8
2,734,131 - MPMX20_02596 0.26 -2.6
2,734,132 - MPMX20_02596 0.26 -1.9
2,734,157 + MPMX20_02596 0.29 -1.1
2,734,200 + MPMX20_02596 0.34 -1.1
2,734,200 + MPMX20_02596 0.34 -1.4
2,734,219 - MPMX20_02596 0.37 -1.0
2,734,244 + MPMX20_02596 0.40 -1.5
2,734,299 - MPMX20_02596 0.46 -1.6
2,734,299 - MPMX20_02596 0.46 -1.4
2,734,329 - MPMX20_02596 0.50 -0.6
2,734,334 + MPMX20_02596 0.50 -2.3
2,734,334 + MPMX20_02596 0.50 -1.6
2,734,334 + MPMX20_02596 0.50 -0.6
2,734,334 + MPMX20_02596 0.50 +0.2
2,734,334 + MPMX20_02596 0.50 -2.2
2,734,342 - MPMX20_02596 0.51 -1.1
2,734,342 - MPMX20_02596 0.51 -3.0
2,734,342 - MPMX20_02596 0.51 -2.7
2,734,342 - MPMX20_02596 0.51 -1.4
2,734,342 - MPMX20_02596 0.51 +0.2
2,734,342 - MPMX20_02596 0.51 -0.3
2,734,342 - MPMX20_02596 0.51 -1.0
2,734,342 - MPMX20_02596 0.51 -1.6
2,734,342 - MPMX20_02596 0.51 -0.6
2,734,342 - MPMX20_02596 0.51 -2.9
2,734,366 + MPMX20_02596 0.54 -2.4
2,734,432 - MPMX20_02596 0.62 -1.1
2,734,432 - MPMX20_02596 0.62 -0.4
2,734,493 + MPMX20_02596 0.69 -1.8
2,734,511 - MPMX20_02596 0.71 -0.8
2,734,525 - MPMX20_02596 0.73 -2.1
2,734,622 + MPMX20_02596 0.84 -2.7
2,734,630 - MPMX20_02596 0.85 -1.1
2,734,630 - MPMX20_02596 0.85 -4.0
2,734,635 - MPMX20_02596 0.86 -1.6
2,734,684 - -1.8
2,734,686 + -2.2
2,734,686 + -3.8
2,734,686 + -1.2
2,734,698 + -1.7
2,734,778 + +0.4
2,734,785 + +1.8
2,734,870 + -0.5
2,734,899 + -0.2
2,734,907 - -1.0
2,734,928 + MPMX20_02597 0.20 +0.8
2,734,928 + MPMX20_02597 0.20 +3.0
2,734,928 + MPMX20_02597 0.20 +0.3
2,734,928 + MPMX20_02597 0.20 +0.2
2,734,936 - MPMX20_02597 0.29 -0.8
2,735,056 - MPMX20_02598 0.29 +1.2
2,735,056 - MPMX20_02598 0.29 +0.2
2,735,056 - MPMX20_02598 0.29 +2.1
2,735,056 - MPMX20_02598 0.29 -1.8
2,735,188 - -1.5
2,735,192 - +1.2
2,735,239 - MPMX20_02599 0.14 +3.1
2,735,270 + MPMX20_02599 0.21 -0.1
2,735,298 - MPMX20_02599 0.27 -0.5
2,735,320 - MPMX20_02599 0.32 +0.7
2,735,389 - MPMX20_02599 0.48 -0.7
2,735,430 - MPMX20_02599 0.57 -0.2
2,735,432 - MPMX20_02599 0.57 +1.5
2,735,437 - MPMX20_02599 0.59 +1.2
2,735,452 - MPMX20_02599 0.62 +0.4
2,735,463 - MPMX20_02599 0.64 -0.6
2,735,463 - MPMX20_02599 0.64 +0.8
2,735,473 + MPMX20_02599 0.67 +0.1
2,735,490 + MPMX20_02599 0.70 +0.2
2,735,508 + MPMX20_02599 0.75 +0.4
2,735,510 + MPMX20_02599 0.75 -0.7
2,735,511 - MPMX20_02599 0.75 -2.3
2,735,511 - MPMX20_02599 0.75 +0.4
2,735,511 - MPMX20_02599 0.75 -0.0
2,735,519 + MPMX20_02599 0.77 -1.5
2,735,553 - MPMX20_02599 0.85 -1.1
2,735,565 + MPMX20_02599 0.87 +0.2
2,735,573 - MPMX20_02599 0.89 -1.8
2,735,579 + +0.1
2,735,660 - +0.5
2,735,661 - -0.2
2,735,813 - -1.8
2,735,850 + MPMX20_02600 0.14 +2.1
2,735,853 - MPMX20_02600 0.14 +0.1
2,735,953 - MPMX20_02600 0.25 +0.4
2,735,956 + MPMX20_02600 0.25 +0.9
2,735,958 + MPMX20_02600 0.26 +0.1
2,735,959 - MPMX20_02600 0.26 +1.2
2,735,966 + MPMX20_02600 0.27 +1.0
2,735,967 - MPMX20_02600 0.27 +1.2
2,735,974 - MPMX20_02600 0.27 -0.7
2,735,976 + MPMX20_02600 0.28 +0.6
2,735,984 - MPMX20_02600 0.29 +0.5
2,735,991 - MPMX20_02600 0.29 -2.8

Or see this region's nucleotide sequence