Experiment: Cytidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00809 and MPMX20_00810 are separated by 52 nucleotides MPMX20_00810 and MPMX20_00811 are separated by 10 nucleotides
MPMX20_00809: MPMX20_00809 - Dihydrolipoyl dehydrogenase, at 849,122 to 850,546
_00809
MPMX20_00810: MPMX20_00810 - hypothetical protein, at 850,599 to 851,390
_00810
MPMX20_00811: MPMX20_00811 - hypothetical protein, at 851,401 to 852,930
_00811
Position (kb) 850
851
852 Strain fitness (log2 ratio) -1
0
1
2 at 850.519 kb on + strand at 850.606 kb on - strand at 850.620 kb on + strand at 850.639 kb on + strand at 850.642 kb on + strand at 850.679 kb on + strand, within MPMX20_00810 at 850.730 kb on - strand, within MPMX20_00810 at 850.758 kb on - strand, within MPMX20_00810 at 850.814 kb on - strand, within MPMX20_00810 at 850.861 kb on - strand, within MPMX20_00810 at 850.874 kb on + strand, within MPMX20_00810 at 850.877 kb on - strand, within MPMX20_00810 at 850.882 kb on - strand, within MPMX20_00810 at 850.884 kb on + strand, within MPMX20_00810 at 850.943 kb on + strand, within MPMX20_00810 at 851.399 kb on + strand at 851.424 kb on + strand at 851.432 kb on - strand at 851.482 kb on + strand at 851.490 kb on - strand at 852.070 kb on - strand, within MPMX20_00811 at 852.138 kb on + strand, within MPMX20_00811 at 852.139 kb on + strand, within MPMX20_00811 at 852.145 kb on + strand, within MPMX20_00811 at 852.152 kb on + strand, within MPMX20_00811 at 852.210 kb on + strand, within MPMX20_00811 at 852.242 kb on + strand, within MPMX20_00811
Per-strain Table
Position Strand Gene LocusTag Fraction Cytidine (N) remove 850,519 + +0.5 850,606 - +1.5 850,620 + -0.5 850,639 + -1.3 850,642 + -0.5 850,679 + MPMX20_00810 0.10 +0.1 850,730 - MPMX20_00810 0.17 -0.6 850,758 - MPMX20_00810 0.20 +0.9 850,814 - MPMX20_00810 0.27 +0.9 850,861 - MPMX20_00810 0.33 +0.6 850,874 + MPMX20_00810 0.35 -0.9 850,877 - MPMX20_00810 0.35 +2.1 850,882 - MPMX20_00810 0.36 +0.7 850,884 + MPMX20_00810 0.36 -1.1 850,943 + MPMX20_00810 0.43 +1.3 851,399 + -0.6 851,424 + -0.2 851,432 - +0.2 851,482 + +0.4 851,490 - +0.6 852,070 - MPMX20_00811 0.44 +0.6 852,138 + MPMX20_00811 0.48 -1.0 852,139 + MPMX20_00811 0.48 -0.4 852,145 + MPMX20_00811 0.49 +0.1 852,152 + MPMX20_00811 0.49 -1.1 852,210 + MPMX20_00811 0.53 +1.3 852,242 + MPMX20_00811 0.55 -0.5
Or see this region's nucleotide sequence