Strain Fitness in Pantoea sp. MT58 around IAI47_07815

Experiment: Ying_all64 rep B; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 1
1,652,584	-				-0.3
1,652,733	+				+1.4
1,652,733	+				-1.2
1,652,733	+				-0.4
1,652,734	-				+0.0
1,652,734	-				+0.1
1,652,734	-				-0.7
1,652,734	-				+1.2
1,652,734	-				+0.3
1,652,734	-				+0.8
1,652,734	-				-0.3
1,652,736	+				+0.0
1,652,736	+				+2.2
1,652,736	+				-1.1
1,652,736	+				+0.4
1,652,736	+				-1.3
1,652,736	+				-1.3
1,652,737	-				+0.4
1,652,737	-				-0.2
1,652,737	-				+1.3
1,652,737	-				+0.2
1,652,737	-				-0.4
1,652,802	+		IAI47_07810	0.10	-1.9
1,652,802	+		IAI47_07810	0.10	+0.6
1,652,802	+		IAI47_07810	0.10	-0.2
1,652,802	+		IAI47_07810	0.10	+1.2
1,652,803	-		IAI47_07810	0.10	+0.5
1,652,875	-		IAI47_07810	0.19	-1.7
1,652,875	-		IAI47_07810	0.19	+0.0
1,652,949	+		IAI47_07810	0.27	+0.2
1,652,949	+		IAI47_07810	0.27	-0.2
1,653,243	+		IAI47_07810	0.61	-0.1
1,653,244	-		IAI47_07810	0.61	-0.2
1,653,244	-		IAI47_07810	0.61	-0.5
1,653,363	+		IAI47_07810	0.75	+0.4
1,653,363	+		IAI47_07810	0.75	+0.2
1,653,364	-		IAI47_07810	0.75	-0.2
1,653,364	-		IAI47_07810	0.75	+0.0
1,653,364	-		IAI47_07810	0.75	-0.4
1,653,364	-		IAI47_07810	0.75	+0.4
1,653,455	+		IAI47_07810	0.86	+0.8
1,653,455	+		IAI47_07810	0.86	-0.8
1,653,486	-		IAI47_07810	0.90	+0.4
1,653,514	+				+1.4
1,653,514	+				+3.0
1,653,515	-				-0.2
1,653,515	-				-0.8
1,653,515	-				+0.9
1,653,528	-				+0.4
1,653,528	-				-0.6
1,653,533	-				+0.1
1,653,533	-				-0.3
1,653,585	+				+0.8
1,653,585	+				-0.3
1,653,585	+				+0.6
1,653,645	-				+0.1
1,653,657	+				+0.8
1,653,657	+				+0.4
1,653,657	+				+0.7
1,653,657	+				-1.2
1,653,658	-				-0.6
1,653,686	+		IAI47_07815	0.13	-0.8
1,653,686	+		IAI47_07815	0.13	-2.1
1,653,687	-		IAI47_07815	0.13	+1.2
1,653,687	-		IAI47_07815	0.13	+0.8
1,653,687	-		IAI47_07815	0.13	+0.6
1,653,687	-		IAI47_07815	0.13	-1.5
1,653,687	-		IAI47_07815	0.13	-0.4
1,653,687	-		IAI47_07815	0.13	+0.2
1,653,687	-		IAI47_07815	0.13	+0.3
1,653,687	-		IAI47_07815	0.13	+1.0
1,653,687	-		IAI47_07815	0.13	-2.5
1,653,689	+		IAI47_07815	0.13	+1.1
1,653,689	+		IAI47_07815	0.13	+1.3
1,653,689	+		IAI47_07815	0.13	+2.2
1,653,689	+		IAI47_07815	0.13	-0.5
1,653,689	+		IAI47_07815	0.13	+0.7
1,653,689	+		IAI47_07815	0.13	-0.1
1,653,689	+		IAI47_07815	0.13	-0.4
1,653,689	+		IAI47_07815	0.13	-1.2
1,653,689	+		IAI47_07815	0.13	+0.5
1,653,690	-		IAI47_07815	0.13	+1.3
1,653,690	-		IAI47_07815	0.13	-0.2
1,653,690	-		IAI47_07815	0.13	-0.1
1,653,690	-		IAI47_07815	0.13	+0.8
1,653,708	+		IAI47_07815	0.15	+1.0
1,653,708	+		IAI47_07815	0.15	-0.9
1,653,709	-		IAI47_07815	0.15	-0.9
1,653,709	-		IAI47_07815	0.15	-0.6
1,653,761	+		IAI47_07815	0.21	-0.4
1,653,762	-		IAI47_07815	0.21	+0.4
1,653,762	-		IAI47_07815	0.21	-0.5
1,653,762	-		IAI47_07815	0.21	+0.8
1,653,840	+		IAI47_07815	0.30	-0.5
1,653,840	+		IAI47_07815	0.30	-0.3
1,653,840	+		IAI47_07815	0.30	-0.2
1,653,841	-		IAI47_07815	0.30	-0.2
1,653,975	+		IAI47_07815	0.46	-0.3
1,653,975	+		IAI47_07815	0.46	-0.5
1,654,008	+		IAI47_07815	0.49	-0.2
1,654,009	-		IAI47_07815	0.49	+0.2
1,654,009	-		IAI47_07815	0.49	+0.2
1,654,058	-		IAI47_07815	0.55	-0.0
1,654,223	+		IAI47_07815	0.74	-0.6
1,654,240	+		IAI47_07815	0.75	+0.8
1,654,295	+		IAI47_07815	0.82	-1.1
1,654,296	-		IAI47_07815	0.82	+0.5
1,654,296	-		IAI47_07815	0.82	-0.4
1,654,406	+				+1.1
1,654,406	+				-0.8
1,654,406	+				-0.5
1,654,406	+				-0.8
1,654,407	-				+0.3
1,654,407	-				+0.5
1,654,407	-				-0.4
1,654,485	+				+0.0
1,654,486	-				-1.5
1,654,486	-				-0.5
1,654,486	-				-1.5
1,654,580	+				-0.5
1,654,581	-				+1.2
1,654,641	-				-0.5
1,654,653	+				+1.0
1,654,745	-		IAI47_07820	0.13	+1.4
1,654,956	+		IAI47_07820	0.21	+0.2
1,654,956	+		IAI47_07820	0.21	+0.1
1,654,957	-		IAI47_07820	0.21	-0.4
1,654,957	-		IAI47_07820	0.21	+0.2
1,654,957	-		IAI47_07820	0.21	-0.0
1,654,957	-		IAI47_07820	0.21	-0.5
1,654,957	-		IAI47_07820	0.21	+0.2
1,654,957	-		IAI47_07820	0.21	-1.6
1,654,957	-		IAI47_07820	0.21	+0.7
1,654,987	+		IAI47_07820	0.22	-0.2
1,654,988	-		IAI47_07820	0.22	-0.4
1,655,283	-		IAI47_07820	0.33	+0.3
1,655,369	-		IAI47_07820	0.37	+0.3