Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02288

Experiment: Inosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02286 and MPMX20_02287 are separated by 60 nucleotidesMPMX20_02287 and MPMX20_02288 are separated by 474 nucleotidesMPMX20_02288 and MPMX20_02289 are separated by 284 nucleotides MPMX20_02286: MPMX20_02286 - Glycerol-3-phosphate regulon repressor, at 2,396,909 to 2,397,682 _02286 MPMX20_02287: MPMX20_02287 - hypothetical protein, at 2,397,743 to 2,398,105 _02287 MPMX20_02288: MPMX20_02288 - hypothetical protein, at 2,398,580 to 2,398,807 _02288 MPMX20_02289: MPMX20_02289 - hypothetical protein, at 2,399,092 to 2,400,483 _02289 Position (kb) 2398 2399Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2397.660 kb on + strandat 2397.668 kb on - strandat 2397.684 kb on - strandat 2397.703 kb on - strandat 2397.717 kb on - strandat 2397.721 kb on + strandat 2397.853 kb on - strand, within MPMX20_02287at 2397.893 kb on - strand, within MPMX20_02287at 2397.944 kb on - strand, within MPMX20_02287at 2397.987 kb on + strand, within MPMX20_02287at 2398.240 kb on + strandat 2398.240 kb on + strandat 2398.248 kb on - strandat 2398.248 kb on - strandat 2398.248 kb on - strandat 2398.276 kb on + strandat 2398.279 kb on - strandat 2398.323 kb on - strandat 2398.377 kb on - strandat 2398.450 kb on + strandat 2398.545 kb on + strandat 2398.545 kb on + strandat 2398.576 kb on - strandat 2398.593 kb on - strandat 2398.595 kb on - strandat 2398.821 kb on + strandat 2398.821 kb on + strandat 2398.821 kb on + strandat 2398.821 kb on + strandat 2398.821 kb on + strandat 2398.829 kb on - strandat 2398.829 kb on - strandat 2398.829 kb on - strandat 2398.829 kb on - strandat 2398.830 kb on - strandat 2398.839 kb on - strandat 2398.841 kb on + strandat 2398.841 kb on + strandat 2398.841 kb on + strandat 2398.841 kb on + strandat 2398.849 kb on - strandat 2398.886 kb on - strandat 2398.966 kb on + strandat 2398.966 kb on + strandat 2398.994 kb on + strandat 2398.994 kb on + strandat 2398.994 kb on + strandat 2398.994 kb on + strandat 2399.002 kb on - strandat 2399.017 kb on + strandat 2399.109 kb on + strandat 2399.120 kb on + strandat 2399.132 kb on + strandat 2399.140 kb on + strandat 2399.145 kb on + strandat 2399.233 kb on + strand, within MPMX20_02289

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine (N)
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2,397,660 + +0.2
2,397,668 - -1.0
2,397,684 - -1.0
2,397,703 - +1.2
2,397,717 - +0.8
2,397,721 + +1.0
2,397,853 - MPMX20_02287 0.30 -2.7
2,397,893 - MPMX20_02287 0.41 -1.7
2,397,944 - MPMX20_02287 0.55 -0.0
2,397,987 + MPMX20_02287 0.67 -0.9
2,398,240 + -0.1
2,398,240 + -2.2
2,398,248 - -3.6
2,398,248 - -0.2
2,398,248 - -0.2
2,398,276 + +0.1
2,398,279 - -0.6
2,398,323 - +1.2
2,398,377 - -1.7
2,398,450 + -2.7
2,398,545 + -2.5
2,398,545 + -0.0
2,398,576 - -0.4
2,398,593 - +0.9
2,398,595 - +1.0
2,398,821 + -0.0
2,398,821 + -2.2
2,398,821 + -1.0
2,398,821 + +1.9
2,398,821 + +1.4
2,398,829 - -1.6
2,398,829 - -0.1
2,398,829 - +2.2
2,398,829 - -1.9
2,398,830 - -1.4
2,398,839 - +0.1
2,398,841 + -2.7
2,398,841 + +1.1
2,398,841 + -0.3
2,398,841 + -0.3
2,398,849 - -1.5
2,398,886 - -1.2
2,398,966 + +0.2
2,398,966 + -0.6
2,398,994 + -0.5
2,398,994 + +1.7
2,398,994 + -1.7
2,398,994 + -1.9
2,399,002 - +0.4
2,399,017 + -0.6
2,399,109 + -0.6
2,399,120 + -1.9
2,399,132 + -0.6
2,399,140 + -0.9
2,399,145 + -0.2
2,399,233 + MPMX20_02289 0.10 -0.6

Or see this region's nucleotide sequence