Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01092 and MPMX20_01093 are separated by 24 nucleotides MPMX20_01093 and MPMX20_01094 overlap by 4 nucleotides MPMX20_01094 and MPMX20_01095 are separated by 182 nucleotides
MPMX20_01092: MPMX20_01092 - Thioesterase 1/protease 1/lysophospholipase L1, at 1,151,464 to 1,152,033
_01092
MPMX20_01093: MPMX20_01093 - Lipoprotein-releasing system ATP-binding protein LolD, at 1,152,058 to 1,152,744
_01093
MPMX20_01094: MPMX20_01094 - hypothetical protein, at 1,152,741 to 1,155,155
_01094
MPMX20_01095: MPMX20_01095 - hypothetical protein, at 1,155,338 to 1,156,483
_01095
Position (kb)
1152
1153
1154
1155
1156 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1151.745 kb on + strand, within MPMX20_01092 at 1151.752 kb on + strand, within MPMX20_01092 at 1151.760 kb on - strand, within MPMX20_01092 at 1151.760 kb on - strand, within MPMX20_01092 at 1151.780 kb on - strand, within MPMX20_01092 at 1151.834 kb on + strand, within MPMX20_01092 at 1151.863 kb on + strand, within MPMX20_01092 at 1151.871 kb on - strand, within MPMX20_01092 at 1151.909 kb on + strand, within MPMX20_01092 at 1151.917 kb on - strand, within MPMX20_01092 at 1151.937 kb on + strand, within MPMX20_01092 at 1151.937 kb on + strand, within MPMX20_01092 at 1151.937 kb on + strand, within MPMX20_01092 at 1151.937 kb on + strand, within MPMX20_01092 at 1151.940 kb on - strand, within MPMX20_01092 at 1151.950 kb on - strand, within MPMX20_01092 at 1151.950 kb on - strand, within MPMX20_01092 at 1151.997 kb on + strand at 1151.997 kb on + strand at 1152.106 kb on + strand at 1152.120 kb on - strand at 1152.141 kb on + strand, within MPMX20_01093 at 1152.189 kb on + strand, within MPMX20_01093 at 1152.253 kb on - strand, within MPMX20_01093 at 1152.253 kb on - strand, within MPMX20_01093 at 1152.294 kb on + strand, within MPMX20_01093 at 1152.405 kb on - strand, within MPMX20_01093 at 1152.426 kb on - strand, within MPMX20_01093 at 1152.441 kb on + strand, within MPMX20_01093 at 1152.456 kb on + strand, within MPMX20_01093 at 1152.456 kb on + strand, within MPMX20_01093 at 1152.498 kb on + strand, within MPMX20_01093 at 1152.516 kb on - strand, within MPMX20_01093 at 1152.516 kb on - strand, within MPMX20_01093 at 1152.523 kb on + strand, within MPMX20_01093 at 1152.523 kb on + strand, within MPMX20_01093 at 1152.523 kb on + strand, within MPMX20_01093 at 1152.523 kb on + strand, within MPMX20_01093 at 1152.523 kb on + strand, within MPMX20_01093 at 1152.525 kb on - strand, within MPMX20_01093 at 1152.531 kb on - strand, within MPMX20_01093 at 1152.531 kb on - strand, within MPMX20_01093 at 1152.531 kb on - strand, within MPMX20_01093 at 1152.531 kb on - strand, within MPMX20_01093 at 1152.553 kb on + strand, within MPMX20_01093 at 1152.561 kb on - strand, within MPMX20_01093 at 1152.643 kb on - strand, within MPMX20_01093 at 1152.643 kb on - strand, within MPMX20_01093 at 1152.655 kb on - strand, within MPMX20_01093 at 1152.735 kb on - strand at 1152.783 kb on - strand at 1152.844 kb on - strand at 1152.849 kb on - strand at 1152.872 kb on - strand at 1152.873 kb on - strand at 1152.997 kb on + strand, within MPMX20_01094 at 1153.069 kb on - strand, within MPMX20_01094 at 1153.074 kb on + strand, within MPMX20_01094 at 1153.074 kb on + strand, within MPMX20_01094 at 1153.132 kb on + strand, within MPMX20_01094 at 1153.186 kb on - strand, within MPMX20_01094 at 1153.239 kb on - strand, within MPMX20_01094 at 1153.241 kb on + strand, within MPMX20_01094 at 1153.355 kb on + strand, within MPMX20_01094 at 1153.396 kb on - strand, within MPMX20_01094 at 1153.414 kb on + strand, within MPMX20_01094 at 1153.422 kb on - strand, within MPMX20_01094 at 1153.432 kb on - strand, within MPMX20_01094 at 1153.485 kb on + strand, within MPMX20_01094 at 1153.485 kb on - strand, within MPMX20_01094 at 1153.493 kb on - strand, within MPMX20_01094 at 1153.494 kb on - strand, within MPMX20_01094 at 1153.576 kb on - strand, within MPMX20_01094 at 1153.650 kb on - strand, within MPMX20_01094 at 1153.650 kb on - strand, within MPMX20_01094 at 1153.705 kb on + strand, within MPMX20_01094 at 1153.705 kb on + strand, within MPMX20_01094 at 1153.723 kb on + strand, within MPMX20_01094 at 1153.752 kb on - strand, within MPMX20_01094 at 1153.790 kb on + strand, within MPMX20_01094 at 1153.795 kb on + strand, within MPMX20_01094 at 1153.854 kb on - strand, within MPMX20_01094 at 1153.873 kb on - strand, within MPMX20_01094 at 1153.949 kb on + strand, within MPMX20_01094 at 1153.949 kb on + strand, within MPMX20_01094 at 1153.949 kb on + strand, within MPMX20_01094 at 1153.949 kb on + strand, within MPMX20_01094 at 1153.957 kb on - strand, within MPMX20_01094 at 1153.957 kb on - strand, within MPMX20_01094 at 1153.957 kb on - strand, within MPMX20_01094 at 1153.990 kb on + strand, within MPMX20_01094 at 1153.996 kb on - strand, within MPMX20_01094 at 1153.996 kb on - strand, within MPMX20_01094 at 1153.996 kb on - strand, within MPMX20_01094 at 1154.015 kb on + strand, within MPMX20_01094 at 1154.022 kb on - strand, within MPMX20_01094 at 1154.022 kb on - strand, within MPMX20_01094 at 1154.092 kb on + strand, within MPMX20_01094 at 1154.092 kb on + strand, within MPMX20_01094 at 1154.092 kb on + strand, within MPMX20_01094 at 1154.092 kb on + strand, within MPMX20_01094 at 1154.092 kb on + strand, within MPMX20_01094 at 1154.095 kb on - strand, within MPMX20_01094 at 1154.095 kb on - strand, within MPMX20_01094 at 1154.095 kb on - strand, within MPMX20_01094 at 1154.095 kb on - strand, within MPMX20_01094 at 1154.100 kb on - strand, within MPMX20_01094 at 1154.100 kb on - strand, within MPMX20_01094 at 1154.233 kb on + strand, within MPMX20_01094 at 1154.241 kb on - strand, within MPMX20_01094 at 1154.294 kb on + strand, within MPMX20_01094 at 1154.307 kb on + strand, within MPMX20_01094 at 1154.339 kb on + strand, within MPMX20_01094 at 1154.346 kb on - strand, within MPMX20_01094 at 1154.550 kb on - strand, within MPMX20_01094 at 1154.569 kb on - strand, within MPMX20_01094 at 1154.575 kb on + strand, within MPMX20_01094 at 1154.687 kb on - strand, within MPMX20_01094 at 1154.737 kb on + strand, within MPMX20_01094 at 1154.745 kb on - strand, within MPMX20_01094 at 1154.768 kb on + strand, within MPMX20_01094 at 1154.768 kb on + strand, within MPMX20_01094 at 1154.786 kb on + strand, within MPMX20_01094 at 1154.807 kb on + strand, within MPMX20_01094 at 1154.887 kb on + strand, within MPMX20_01094 at 1154.909 kb on + strand, within MPMX20_01094 at 1154.924 kb on + strand at 1154.950 kb on - strand at 1154.995 kb on - strand at 1154.996 kb on - strand at 1155.008 kb on - strand at 1155.067 kb on + strand at 1155.070 kb on - strand at 1155.144 kb on - strand at 1155.308 kb on + strand at 1155.383 kb on - strand at 1155.386 kb on + strand at 1155.386 kb on + strand at 1155.394 kb on - strand at 1155.394 kb on - strand at 1155.462 kb on + strand, within MPMX20_01095 at 1155.476 kb on - strand, within MPMX20_01095 at 1155.524 kb on + strand, within MPMX20_01095 at 1155.629 kb on - strand, within MPMX20_01095 at 1155.629 kb on - strand, within MPMX20_01095 at 1155.648 kb on - strand, within MPMX20_01095 at 1155.650 kb on - strand, within MPMX20_01095 at 1155.650 kb on - strand, within MPMX20_01095 at 1155.678 kb on - strand, within MPMX20_01095 at 1155.706 kb on + strand, within MPMX20_01095 at 1155.706 kb on + strand, within MPMX20_01095 at 1155.707 kb on - strand, within MPMX20_01095 at 1155.714 kb on - strand, within MPMX20_01095 at 1155.714 kb on - strand, within MPMX20_01095 at 1155.714 kb on - strand, within MPMX20_01095 at 1155.724 kb on - strand, within MPMX20_01095 at 1155.738 kb on - strand, within MPMX20_01095 at 1155.738 kb on - strand, within MPMX20_01095 at 1155.743 kb on - strand, within MPMX20_01095 at 1155.744 kb on - strand, within MPMX20_01095 at 1155.755 kb on + strand, within MPMX20_01095 at 1155.760 kb on + strand, within MPMX20_01095 at 1155.768 kb on - strand, within MPMX20_01095 at 1155.784 kb on - strand, within MPMX20_01095 at 1155.827 kb on + strand, within MPMX20_01095 at 1155.834 kb on - strand, within MPMX20_01095 at 1155.834 kb on - strand, within MPMX20_01095 at 1155.834 kb on - strand, within MPMX20_01095 at 1155.841 kb on + strand, within MPMX20_01095 at 1155.851 kb on + strand, within MPMX20_01095 at 1155.953 kb on - strand, within MPMX20_01095 at 1156.015 kb on + strand, within MPMX20_01095 at 1156.030 kb on + strand, within MPMX20_01095 at 1156.048 kb on + strand, within MPMX20_01095 at 1156.051 kb on - strand, within MPMX20_01095 at 1156.057 kb on - strand, within MPMX20_01095 at 1156.137 kb on - strand, within MPMX20_01095 at 1156.137 kb on - strand, within MPMX20_01095 at 1156.137 kb on - strand, within MPMX20_01095 at 1156.144 kb on + strand, within MPMX20_01095
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 1,151,745 + MPMX20_01092 0.49 -3.2 1,151,752 + MPMX20_01092 0.51 -1.0 1,151,760 - MPMX20_01092 0.52 -2.6 1,151,760 - MPMX20_01092 0.52 +0.6 1,151,780 - MPMX20_01092 0.55 -2.2 1,151,834 + MPMX20_01092 0.65 -1.2 1,151,863 + MPMX20_01092 0.70 -0.5 1,151,871 - MPMX20_01092 0.71 -1.8 1,151,909 + MPMX20_01092 0.78 -3.2 1,151,917 - MPMX20_01092 0.79 -0.1 1,151,937 + MPMX20_01092 0.83 -0.8 1,151,937 + MPMX20_01092 0.83 +0.9 1,151,937 + MPMX20_01092 0.83 +1.2 1,151,937 + MPMX20_01092 0.83 +0.0 1,151,940 - MPMX20_01092 0.84 -0.4 1,151,950 - MPMX20_01092 0.85 -1.1 1,151,950 - MPMX20_01092 0.85 +1.0 1,151,997 + -1.9 1,151,997 + -2.4 1,152,106 + -1.0 1,152,120 - +0.5 1,152,141 + MPMX20_01093 0.12 -0.8 1,152,189 + MPMX20_01093 0.19 -2.4 1,152,253 - MPMX20_01093 0.28 +0.8 1,152,253 - MPMX20_01093 0.28 -2.4 1,152,294 + MPMX20_01093 0.34 +0.5 1,152,405 - MPMX20_01093 0.51 +1.1 1,152,426 - MPMX20_01093 0.54 -0.1 1,152,441 + MPMX20_01093 0.56 +0.3 1,152,456 + MPMX20_01093 0.58 -0.0 1,152,456 + MPMX20_01093 0.58 -0.4 1,152,498 + MPMX20_01093 0.64 -1.9 1,152,516 - MPMX20_01093 0.67 -1.2 1,152,516 - MPMX20_01093 0.67 -1.2 1,152,523 + MPMX20_01093 0.68 -2.9 1,152,523 + MPMX20_01093 0.68 -1.9 1,152,523 + MPMX20_01093 0.68 +1.0 1,152,523 + MPMX20_01093 0.68 -0.3 1,152,523 + MPMX20_01093 0.68 -0.7 1,152,525 - MPMX20_01093 0.68 -0.7 1,152,531 - MPMX20_01093 0.69 +0.6 1,152,531 - MPMX20_01093 0.69 +0.5 1,152,531 - MPMX20_01093 0.69 -0.6 1,152,531 - MPMX20_01093 0.69 +1.0 1,152,553 + MPMX20_01093 0.72 +0.8 1,152,561 - MPMX20_01093 0.73 -1.4 1,152,643 - MPMX20_01093 0.85 +0.9 1,152,643 - MPMX20_01093 0.85 -0.4 1,152,655 - MPMX20_01093 0.87 -1.1 1,152,735 - -0.3 1,152,783 - -0.3 1,152,844 - -0.6 1,152,849 - -1.2 1,152,872 - +1.5 1,152,873 - -0.8 1,152,997 + MPMX20_01094 0.11 -0.1 1,153,069 - MPMX20_01094 0.14 +0.6 1,153,074 + MPMX20_01094 0.14 -0.2 1,153,074 + MPMX20_01094 0.14 -1.6 1,153,132 + MPMX20_01094 0.16 -0.0 1,153,186 - MPMX20_01094 0.18 -0.9 1,153,239 - MPMX20_01094 0.21 -4.0 1,153,241 + MPMX20_01094 0.21 -0.1 1,153,355 + MPMX20_01094 0.25 +0.8 1,153,396 - MPMX20_01094 0.27 -0.4 1,153,414 + MPMX20_01094 0.28 +0.8 1,153,422 - MPMX20_01094 0.28 +0.1 1,153,432 - MPMX20_01094 0.29 -1.5 1,153,485 + MPMX20_01094 0.31 -3.1 1,153,485 - MPMX20_01094 0.31 -0.3 1,153,493 - MPMX20_01094 0.31 -1.0 1,153,494 - MPMX20_01094 0.31 -1.0 1,153,576 - MPMX20_01094 0.35 -1.2 1,153,650 - MPMX20_01094 0.38 -2.1 1,153,650 - MPMX20_01094 0.38 +0.7 1,153,705 + MPMX20_01094 0.40 -0.4 1,153,705 + MPMX20_01094 0.40 +1.2 1,153,723 + MPMX20_01094 0.41 +0.2 1,153,752 - MPMX20_01094 0.42 -0.7 1,153,790 + MPMX20_01094 0.43 -0.5 1,153,795 + MPMX20_01094 0.44 -0.4 1,153,854 - MPMX20_01094 0.46 +0.5 1,153,873 - MPMX20_01094 0.47 +0.8 1,153,949 + MPMX20_01094 0.50 -0.7 1,153,949 + MPMX20_01094 0.50 -3.2 1,153,949 + MPMX20_01094 0.50 -0.2 1,153,949 + MPMX20_01094 0.50 -2.6 1,153,957 - MPMX20_01094 0.50 -0.0 1,153,957 - MPMX20_01094 0.50 +1.6 1,153,957 - MPMX20_01094 0.50 +0.4 1,153,990 + MPMX20_01094 0.52 +1.4 1,153,996 - MPMX20_01094 0.52 -0.2 1,153,996 - MPMX20_01094 0.52 -1.6 1,153,996 - MPMX20_01094 0.52 +1.4 1,154,015 + MPMX20_01094 0.53 -1.3 1,154,022 - MPMX20_01094 0.53 -0.1 1,154,022 - MPMX20_01094 0.53 +3.2 1,154,092 + MPMX20_01094 0.56 -1.5 1,154,092 + MPMX20_01094 0.56 +2.2 1,154,092 + MPMX20_01094 0.56 -1.0 1,154,092 + MPMX20_01094 0.56 -0.6 1,154,092 + MPMX20_01094 0.56 +0.7 1,154,095 - MPMX20_01094 0.56 +1.0 1,154,095 - MPMX20_01094 0.56 -3.3 1,154,095 - MPMX20_01094 0.56 -1.3 1,154,095 - MPMX20_01094 0.56 -2.8 1,154,100 - MPMX20_01094 0.56 -0.5 1,154,100 - MPMX20_01094 0.56 -1.6 1,154,233 + MPMX20_01094 0.62 -2.4 1,154,241 - MPMX20_01094 0.62 -2.0 1,154,294 + MPMX20_01094 0.64 -4.2 1,154,307 + MPMX20_01094 0.65 +1.1 1,154,339 + MPMX20_01094 0.66 -0.2 1,154,346 - MPMX20_01094 0.66 +0.1 1,154,550 - MPMX20_01094 0.75 +2.2 1,154,569 - MPMX20_01094 0.76 -0.4 1,154,575 + MPMX20_01094 0.76 -1.6 1,154,687 - MPMX20_01094 0.81 -0.7 1,154,737 + MPMX20_01094 0.83 -3.3 1,154,745 - MPMX20_01094 0.83 -1.0 1,154,768 + MPMX20_01094 0.84 -1.8 1,154,768 + MPMX20_01094 0.84 -1.8 1,154,786 + MPMX20_01094 0.85 -2.4 1,154,807 + MPMX20_01094 0.86 -1.3 1,154,887 + MPMX20_01094 0.89 -0.6 1,154,909 + MPMX20_01094 0.90 +1.2 1,154,924 + -0.8 1,154,950 - -2.1 1,154,995 - -2.9 1,154,996 - +1.4 1,155,008 - -1.0 1,155,067 + +0.6 1,155,070 - +0.6 1,155,144 - -1.0 1,155,308 + +0.5 1,155,383 - -0.4 1,155,386 + -1.7 1,155,386 + +1.2 1,155,394 - +0.6 1,155,394 - +1.0 1,155,462 + MPMX20_01095 0.11 +1.7 1,155,476 - MPMX20_01095 0.12 -0.4 1,155,524 + MPMX20_01095 0.16 -0.4 1,155,629 - MPMX20_01095 0.25 +3.4 1,155,629 - MPMX20_01095 0.25 +0.0 1,155,648 - MPMX20_01095 0.27 +0.3 1,155,650 - MPMX20_01095 0.27 +2.3 1,155,650 - MPMX20_01095 0.27 -1.5 1,155,678 - MPMX20_01095 0.30 -0.5 1,155,706 + MPMX20_01095 0.32 -1.0 1,155,706 + MPMX20_01095 0.32 -0.7 1,155,707 - MPMX20_01095 0.32 -1.1 1,155,714 - MPMX20_01095 0.33 -0.4 1,155,714 - MPMX20_01095 0.33 +0.7 1,155,714 - MPMX20_01095 0.33 +0.2 1,155,724 - MPMX20_01095 0.34 +0.8 1,155,738 - MPMX20_01095 0.35 -1.0 1,155,738 - MPMX20_01095 0.35 -0.6 1,155,743 - MPMX20_01095 0.35 +0.6 1,155,744 - MPMX20_01095 0.35 +2.1 1,155,755 + MPMX20_01095 0.36 +1.1 1,155,760 + MPMX20_01095 0.37 -2.2 1,155,768 - MPMX20_01095 0.38 +0.6 1,155,784 - MPMX20_01095 0.39 -1.7 1,155,827 + MPMX20_01095 0.43 -0.0 1,155,834 - MPMX20_01095 0.43 -0.8 1,155,834 - MPMX20_01095 0.43 +1.3 1,155,834 - MPMX20_01095 0.43 -4.1 1,155,841 + MPMX20_01095 0.44 +0.3 1,155,851 + MPMX20_01095 0.45 -2.2 1,155,953 - MPMX20_01095 0.54 -2.0 1,156,015 + MPMX20_01095 0.59 +0.7 1,156,030 + MPMX20_01095 0.60 -0.1 1,156,048 + MPMX20_01095 0.62 -2.0 1,156,051 - MPMX20_01095 0.62 +3.4 1,156,057 - MPMX20_01095 0.63 -0.7 1,156,137 - MPMX20_01095 0.70 +1.6 1,156,137 - MPMX20_01095 0.70 -0.0 1,156,137 - MPMX20_01095 0.70 +1.0 1,156,144 + MPMX20_01095 0.70 +0.2
Or see this region's nucleotide sequence