Strain Fitness in Pantoea sp. MT58 around IAI47_18850

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
4,016,742	+		IAI47_18840	0.41	+0.3
4,016,743	-		IAI47_18840	0.41	-0.0
4,016,743	-		IAI47_18840	0.41	+1.0
4,016,761	-		IAI47_18840	0.48	+1.1
4,016,839	+		IAI47_18840	0.78	+0.4
4,016,839	+		IAI47_18840	0.78	-2.4
4,016,839	+		IAI47_18840	0.78	+0.5
4,016,840	-		IAI47_18840	0.79	-0.1
4,016,840	-		IAI47_18840	0.79	+1.4
4,017,515	+				-1.5
4,017,515	+				-0.8
4,017,515	+				-1.1
4,017,515	+				-1.4
4,017,516	-				-1.6
4,017,516	-				+0.0
4,017,534	+				-0.2
4,017,534	+				-1.0
4,017,534	+				+0.4
4,017,534	+				-1.3
4,017,534	+				+0.2
4,017,534	+				-0.1
4,017,534	+				-1.6
4,017,589	+				-0.8
4,017,589	+				+0.8
4,017,589	+				-2.6
4,017,589	+				+0.3
4,017,590	-				-0.2
4,017,590	-				-0.2
4,017,590	-				+0.8
4,017,590	-				+0.0
4,017,591	+				-0.4
4,017,591	+				+0.0
4,017,592	-				-1.6
4,017,605	+				+0.8
4,017,606	-				-1.6
4,017,631	+				+1.1
4,017,632	-				+0.3
4,017,632	-				+0.2
4,017,632	-				+0.8
4,017,671	+				+0.3
4,017,671	+				+1.0
4,017,691	+				-0.9
4,017,691	+				-0.9
4,017,691	+				-0.2
4,017,691	+				-0.7
4,017,691	+				-1.2
4,017,691	+				-0.2
4,017,692	-				-1.8
4,017,692	-				+0.3
4,017,692	-				+0.2
4,017,692	-				+0.8
4,017,692	-				+0.8
4,017,735	+				-0.7
4,017,782	+				+0.2
4,017,783	-				+0.5
4,017,783	-				-0.1
4,017,783	-				+0.1
4,017,783	-				-1.7
4,017,814	+				+0.4
4,017,814	+				-0.3
4,017,871	+				-1.2
4,017,892	+				+1.4
4,017,921	+				-1.9
4,017,926	+				-0.7
4,017,933	+				+1.0
4,017,933	+				+0.8
4,017,936	+				-1.7
4,017,936	+				+0.4
4,017,936	+				-0.4
4,017,936	+				-0.0
4,017,936	+				+0.8
4,017,953	+				-1.1