Strain Fitness in Pantoea sp. MT58 around IAI47_18170

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
3,864,846	-				-0.6
3,864,846	-				-1.6
3,864,846	-				-1.2
3,864,846	-				-1.6
3,864,846	-				+0.4
3,864,859	-				+0.2
3,864,865	-				-1.2
3,864,865	-				-1.2
3,865,119	+				+1.0
3,865,126	+				+0.8
3,865,130	-				+0.0
3,865,170	+				-1.0
3,865,170	+				+0.2
3,865,170	+				-1.2
3,865,170	+				-0.5
3,865,170	+				+0.8
3,865,170	+				-2.4
3,865,170	+				-0.8
3,865,171	-				-1.1
3,865,171	-				-1.4
3,865,171	-				+1.3
3,865,171	-				+0.4
3,865,195	+				+0.2
3,865,196	-				-2.4
3,865,249	+				-0.5
3,865,254	+				-0.7
3,865,255	-				-0.5
3,865,259	+				-0.2
3,865,260	-				+0.8
3,865,279	+				-0.2
3,865,279	+				-2.0
3,865,344	+				+0.2
3,865,344	+				-2.1
3,865,344	+				-1.2
3,865,344	+				-0.2
3,865,344	+				-0.2
3,865,344	+				+0.4
3,865,344	+				-0.1
3,865,345	-				-1.8
3,865,345	-				-0.5
3,865,345	-				+0.3
3,865,345	-				-0.5
3,865,345	-				+0.8
3,865,345	-				+0.8
3,865,345	-				+0.2
3,865,345	-				+1.6
3,865,345	-				-0.2
3,865,349	+				+0.8
3,865,349	+				+2.2
3,865,349	+				-0.6
3,865,350	-				-0.1
3,865,350	-				-0.3
3,865,383	+				-0.2
3,865,383	+				+0.0
3,865,383	+				+0.4
3,865,383	+				+1.4
3,865,383	+				-0.0
3,865,383	+				-1.0
3,865,383	+				+1.1
3,865,383	+				-0.5
3,865,383	+				+0.6
3,865,383	+				+1.4
3,865,383	+				-0.2
3,865,383	+				+0.5
3,865,383	+				-1.5
3,865,383	+				-1.3
3,865,383	+				+0.8
3,865,383	+				+0.4
3,865,383	+				+0.5
3,865,384	-				+0.3
3,865,384	-				-0.0
3,865,384	-				+2.0
3,865,384	-				+0.0
3,865,384	-				-0.6
3,865,384	-				+0.4
3,865,384	-				-1.2
3,865,384	-				+1.2
3,865,384	-				+0.1
3,865,384	-				-1.6
3,865,384	-				-0.9
3,865,384	-				-0.6
3,865,384	-				+0.1
3,865,384	-				+0.4
3,865,384	-				+1.1
3,865,384	-				-0.2
3,865,384	-				+1.0
3,865,384	-				+0.2
3,865,386	-				+0.1
3,865,398	+				+0.6
3,865,399	-				-0.3
3,865,413	-				-0.2
3,865,443	+				-0.1
3,865,444	-				+0.5
3,865,461	+				-1.2
3,865,463	+				-0.2
3,865,463	+				-0.0
3,865,463	+				+0.5
3,865,464	-				+0.1
3,865,472	+				+0.6
3,865,472	+				-1.1
3,865,472	+				+1.5
3,865,472	+				+0.4
3,865,473	-				+0.1
3,865,473	-				+0.8
3,865,481	+				+1.4
3,865,481	+				-0.2
3,865,481	+				+0.1
3,865,481	+				+0.5
3,865,481	+				-0.2
3,865,481	+				+0.0
3,865,481	+				-1.4
3,865,481	+				-0.2
3,865,481	+				-0.2
3,865,482	-				+0.8
3,865,482	-				-0.1
3,865,482	-				+0.2
3,865,482	-				+0.1
3,865,482	-				-0.2
3,865,482	-				+1.0
3,865,482	-				+1.5
3,865,482	-				+0.0
3,865,482	-				+0.7
3,865,482	-				+0.4
3,865,491	+				-0.0
3,865,491	+				+1.1
3,865,492	-				+0.2
3,865,502	+				-0.8
3,865,502	+				-0.1
3,865,502	+				+2.0
3,865,503	-				+1.6
3,865,510	+				-0.2
3,865,518	+				+0.0
3,865,528	+				-0.2
3,865,528	+				-0.5
3,865,528	+				+1.6
3,865,529	-				+0.2
3,865,529	-				+0.8
3,865,529	-				+0.8
3,865,546	+				+0.6
3,865,546	+				-1.0
3,865,546	+				-0.2
3,865,546	+				+0.9
3,865,547	-				+0.2
3,865,547	-				+0.5
3,865,547	-				-1.4
3,865,550	+				-0.7
3,865,550	+				-0.5
3,865,550	+				-0.6
3,865,559	+				+0.4
3,865,559	+				-0.6
3,865,559	+				+0.1
3,865,560	-				+0.3
3,865,560	-				+0.1
3,865,572	+				+0.6
3,865,572	+				+0.8
3,865,572	+				-1.2
3,865,572	+				+1.4
3,865,572	+				+0.4
3,865,572	+				-0.7
3,865,572	+				+0.7
3,865,573	-				-0.0
3,865,573	-				+2.1
3,865,573	-				+0.8
3,865,591	+				+0.2
3,865,591	+				+0.4
3,865,597	+				-1.3
3,865,597	+				+0.3
3,865,597	+				-0.4
3,865,598	-				-0.7
3,865,598	-				+0.4
3,865,598	-				-0.8
3,865,599	+				-0.2
3,865,599	+				-1.2
3,865,599	+				+0.3
3,865,599	+				-0.8
3,865,599	+				+1.3
3,865,599	+				+0.8
3,865,599	+				-0.1
3,865,599	+				-0.9
3,865,599	+				-0.6
3,865,599	+				+0.3
3,865,599	+				+0.1
3,865,599	+				-0.2
3,865,599	+				+0.9
3,865,599	+				-1.2
3,865,600	-				-0.8
3,865,600	-				+0.8
3,865,600	-				-0.3
3,865,600	-				+0.8
3,865,600	-				+1.4
3,865,600	-				-1.0
3,865,600	-				-0.2
3,865,600	-				-1.2
3,865,600	-				-1.3
3,865,600	-				-0.2
3,865,600	-				-0.2
3,865,603	+				+0.8
3,865,603	+				-0.5
3,865,603	+				+0.2
3,865,603	+				-0.6
3,865,604	-				+1.1
3,865,609	+				+0.8
3,865,609	+				-0.0
3,865,609	+				+0.6
3,865,609	+				-0.8
3,865,610	-				+0.4
3,865,610	-				+0.3
3,865,631	-				+0.4
3,865,633	+				-0.4
3,865,633	+				-0.5
3,865,633	+				-0.2
3,865,633	+				-0.1
3,865,633	+				-0.0
3,865,634	-				+1.2
3,865,634	-				-0.7
3,865,634	-				+0.4
3,865,650	-				+0.0
3,865,650	-				+0.3
3,865,650	-				+0.8
3,865,675	+				+0.4
3,865,675	+				-0.1
3,865,676	-				+2.0
3,865,683	+				+0.0
3,865,684	-				-0.2
3,865,692	+				-1.0
3,865,737	+				-0.1
3,865,757	+				-0.2
3,865,801	+				-1.1
3,865,801	+				-0.2
3,865,801	+				-0.5
3,865,801	+				+0.2
3,865,801	+				-1.6
3,865,801	+				-0.5
3,865,801	+				+0.8
3,865,831	+				+0.8
3,865,831	+				+0.2
3,865,831	+				+0.1
3,865,831	+				-0.8
3,865,831	+				+0.5
3,865,831	+				-0.6
3,865,831	+				-1.4
3,866,773	+				-1.4
3,866,773	+				+0.8
3,866,773	+				+0.8
3,866,773	+				+1.4
3,866,773	+				-3.1
3,866,774	-				-0.2
3,866,774	-				-1.8
3,866,777	+				-0.1
3,866,777	+				+1.3
3,866,777	+				+0.2
3,866,778	-				-0.2
3,866,778	-				-0.5
3,866,789	+				-1.2
3,866,790	-				-1.1
3,866,804	+				+0.2
3,866,804	+				+1.0
3,866,804	+				-1.0
3,866,804	+				-0.4
3,866,805	-				-0.8
3,866,805	-				-0.2
3,866,805	-				+0.4
3,866,805	-				-1.0
3,866,834	+				+0.1
3,866,835	-				-0.8
3,866,835	-				-0.1
3,866,835	-				+0.3
3,866,835	-				+1.2
3,866,835	-				+0.4
3,866,835	-				-0.4