Strain Fitness in Pantoea sp. MT58 around IAI47_17100

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
3,625,984	-				-0.6
3,625,984	-				-0.2
3,626,012	-				+0.3
3,626,124	-				+0.1
3,626,148	-				-0.2
3,626,148	-				+1.2
3,626,903	+				+1.0
3,626,903	+				-0.9
3,626,904	-				-0.1
3,626,904	-				+0.6
3,626,913	-				+1.4
3,626,939	+				-0.7
3,626,948	+				+0.1
3,626,948	+				+0.4
3,626,948	+				+0.0
3,626,948	+				-0.8
3,626,948	+				+0.2
3,626,948	+				+0.2
3,626,948	+				-0.1
3,626,948	+				+1.4
3,626,948	+				-0.6
3,626,948	+				-0.5
3,626,948	+				-0.9
3,626,948	+				+0.0
3,626,972	+				-0.8
3,626,972	+				-1.1
3,626,972	+				+0.8
3,626,972	+				+2.4