Strain Fitness in Pantoea sp. MT58 around IAI47_15520

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
3,268,491	-				-1.7
3,268,491	-				-0.5
3,268,491	-				+2.0
3,268,491	-				+1.6
3,268,517	-				-0.1
3,268,523	-				+0.3
3,268,523	-				-0.6
3,268,523	-				+0.3
3,268,523	-				-0.7
3,268,523	-				+0.5
3,268,523	-				+0.7
3,268,533	-				+0.7
3,268,533	-				+0.6
3,269,234	-				+0.2
3,269,234	-				-1.4
3,269,234	-				+0.7
3,269,234	-				+1.2
3,269,235	+				-0.8
3,269,235	+				-1.4
3,269,235	+				+0.7
3,269,236	-				-0.3
3,269,236	-				+0.3
3,269,236	-				-1.0
3,269,236	-				-1.5
3,269,236	-				-1.5
3,269,236	-				+0.2
3,269,236	-				-2.1
3,269,236	-				-0.7
3,269,236	-				+0.0
3,269,236	-				+0.2
3,269,240	+				+0.4
3,269,240	+				+0.2
3,269,240	+				+0.3
3,269,241	-				+0.4
3,269,241	-				-0.8
3,269,241	-				+0.2
3,269,241	-				-0.2
3,269,262	+				+0.1
3,269,262	+				+0.7
3,269,262	+				-0.8
3,269,263	-				+0.7
3,270,026	-				-0.6
3,270,026	-				+0.7
3,270,145	+				+0.7
3,270,146	-				+0.7
3,270,146	-				-0.5
3,270,146	-				-1.0
3,270,146	-				+0.2
3,270,146	-				-0.9
3,270,146	-				+1.2
3,270,146	-				+0.0
3,270,146	-				-2.1